RNA–Protein interactions for RNA: ENST00000435532.7

NEDD4-202, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD4, Length 5,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-202ENST00000435532 FAHD2BQ6P2I3 314 aaPredicted RBP13.72□□□□□ -0.21
NEDD4-202ENST00000435532 DGAT2L6Q6ZPD8 337 aa13.72□□□□□ -0.21
NEDD4-202ENST00000435532 TGIF2LYQ8IUE0 185 aa13.72□□□□□ -0.21
NEDD4-202ENST00000435532 TGIF2LXQ8IUE1 241 aa13.72□□□□□ -0.21
NEDD4-202ENST00000435532 FAHD2AQ96GK7 314 aa13.72□□□□□ -0.21
NEDD4-202ENST00000435532 ADGRG7Q96K78 797 aa13.72□□□□□ -0.21
NEDD4-202ENST00000435532 NIPSNAP3BQ9BS92 247 aa13.72□□□□□ -0.21
NEDD4-202ENST00000435532 NDUFA2O43678 99 aa13.72□□□□□ -0.21
NEDD4-202ENST00000435532 SIX6O95475 246 aa13.72□□□□□ -0.21
NEDD4-202ENST00000435532 MMP15P51511 669 aa13.72□□□□□ -0.21
NEDD4-202ENST00000435532 TRDCB7Z8K6 153 aa13.72□□□□□ -0.21
NEDD4-202ENST00000435532 PI3P19957 117 aa13.72□□□□□ -0.21
NEDD4-202ENST00000435532 TMEM128Q5BJH2 165 aa13.72□□□□□ -0.21
NEDD4-202ENST00000435532 ZNF596Q8TC21 504 aa13.72□□□□□ -0.21
NEDD4-202ENST00000435532 YIPF5Q969M3 257 aa13.72□□□□□ -0.21
NEDD4-202ENST00000435532 RAXQ9Y2V3 346 aa13.72□□□□□ -0.21
NEDD4-202ENST00000435532 INSIG2Q9Y5U4 225 aa13.72□□□□□ -0.21
NEDD4-202ENST00000435532 PUS1Q9Y606 427 aaKnown RBP eCLIP13.72□□□□□ -0.21
NEDD4-202ENST00000435532 B3GALNT1O75752 331 aa13.72□□□□□ -0.21
NEDD4-202ENST00000435532 LYSMD2Q8IV50 215 aa13.72□□□□□ -0.21
NEDD4-202ENST00000435532 MAP6Q96JE9 813 aa13.72□□□□□ -0.21
NEDD4-202ENST00000435532 PCGF1Q9BSM1 259 aa13.72□□□□□ -0.21
NEDD4-202ENST00000435532 EPHA2P29317 976 aa13.71□□□□□ -0.21
NEDD4-202ENST00000435532 RPL12P30050 165 aaKnown RBP13.71□□□□□ -0.21
NEDD4-202ENST00000435532 OR2B8PP59922 312 aa13.71□□□□□ -0.21
NEDD4-202ENST00000435532 UBE2MP61081 183 aaKnown RBP13.71□□□□□ -0.21
NEDD4-202ENST00000435532 USF2Q15853 346 aaPredicted RBP13.71□□□□□ -0.21
NEDD4-202ENST00000435532 SOHLH1Q5JUK2 328 aa13.71□□□□□ -0.21
NEDD4-202ENST00000435532 SMIM4Q8WVI0 70 aa13.71□□□□□ -0.21
NEDD4-202ENST00000435532 DHRS9Q9BPW9 319 aa13.71□□□□□ -0.21
NEDD4-202ENST00000435532 CHRDL1Q9BU40 450 aa13.71□□□□□ -0.21
NEDD4-202ENST00000435532 TMEM165Q9HC07 324 aa13.71□□□□□ -0.21
NEDD4-202ENST00000435532 RCL1Q9Y2P8 373 aaKnown RBP13.71□□□□□ -0.21
NEDD4-202ENST00000435532 IGKV1D-16P01601 117 aa13.71□□□□□ -0.21
NEDD4-202ENST00000435532 LIMK1P53667 647 aa13.71□□□□□ -0.21
NEDD4-202ENST00000435532 SNRPNP63162 240 aaKnown RBP13.71□□□□□ -0.21
NEDD4-202ENST00000435532 ZDHHC22Q8N966 263 aa13.71□□□□□ -0.21
NEDD4-202ENST00000435532 SAT2Q96F10 170 aaPredicted RBP13.71□□□□□ -0.21
NEDD4-202ENST00000435532 MRM2Q9UI43 246 aaKnown RBP13.71□□□□□ -0.21
NEDD4-202ENST00000435532 KIF13BQ9NQT8 1826 aa13.71□□□□□ -0.21
NEDD4-202ENST00000435532 FOXL2P58012 376 aa13.71□□□□□ -0.21
NEDD4-202ENST00000435532 C19orf57Q0VDD7 668 aa13.71□□□□□ -0.21
NEDD4-202ENST00000435532 MAMSTRQ6ZN01 415 aa13.71□□□□□ -0.21
NEDD4-202ENST00000435532 C6orf201Q7Z4U5 140 aa13.71□□□□□ -0.21
NEDD4-202ENST00000435532 SVBPQ8N300 66 aa13.71□□□□□ -0.21
NEDD4-202ENST00000435532 UBALD1Q8TB05 177 aa13.71□□□□□ -0.21
NEDD4-202ENST00000435532 GDF9O60383 454 aa13.71□□□□□ -0.22
NEDD4-202ENST00000435532 PGA3P0DJD8 388 aa13.71□□□□□ -0.22
NEDD4-202ENST00000435532 SMIM17P0DL12 118 aa13.71□□□□□ -0.22
NEDD4-202ENST00000435532 HIST2H3PS2Q5TEC6 136 aa13.71□□□□□ -0.22
NEDD4-202ENST00000435532 ZNF770Q6IQ21 691 aaPredicted RBP13.71□□□□□ -0.22
NEDD4-202ENST00000435532 ZNF788Q6ZQV5 615 aa13.71□□□□□ -0.22
NEDD4-202ENST00000435532 TMUB2Q71RG4 321 aa13.71□□□□□ -0.22
NEDD4-202ENST00000435532 ZBTB44Q8NCP5 570 aa13.71□□□□□ -0.22
NEDD4-202ENST00000435532 NFAM1Q8NET5 270 aaPredicted RBP13.71□□□□□ -0.22
NEDD4-202ENST00000435532 RNF133Q8WVZ7 376 aa13.71□□□□□ -0.22
NEDD4-202ENST00000435532 OR2J1Q9GZK6 312 aa13.71□□□□□ -0.22
NEDD4-202ENST00000435532 LTBP1Q14766 1721 aa13.71□□□□□ -0.22
NEDD4-202ENST00000435532 TRBV23-1A0A0A0MS06 115 aa13.7□□□□□ -0.22
NEDD4-202ENST00000435532 FAM157AC9JC47 383 aa13.7□□□□□ -0.22
NEDD4-202ENST00000435532 UPK3AO75631 287 aa13.7□□□□□ -0.22
NEDD4-202ENST00000435532 BPIFCQ8NFQ6 507 aa13.7□□□□□ -0.22
NEDD4-202ENST00000435532 OR1K1Q8NGR3 316 aa13.7□□□□□ -0.22
NEDD4-202ENST00000435532 SPSB2Q99619 263 aa13.7□□□□□ -0.22
NEDD4-202ENST00000435532 C20orf24Q9BUV8 137 aa13.7□□□□□ -0.22
NEDD4-202ENST00000435532 CNTD2Q9H8S5 307 aa13.7□□□□□ -0.22
NEDD4-202ENST00000435532 PIPOXQ9P0Z9 390 aa13.7□□□□□ -0.22
NEDD4-202ENST00000435532 TMED3Q9Y3Q3 217 aa13.7□□□□□ -0.22
NEDD4-202ENST00000435532 FAM219BQ5XKK7 198 aa13.7□□□□□ -0.22
NEDD4-202ENST00000435532 FUCA1P04066 466 aa13.7□□□□□ -0.22
NEDD4-202ENST00000435532 FGF9P31371 208 aaPredicted RBP13.7□□□□□ -0.22
NEDD4-202ENST00000435532 CD80P33681 288 aa13.7□□□□□ -0.22
NEDD4-202ENST00000435532 SLC35B1P78383 322 aa13.7□□□□□ -0.22
NEDD4-202ENST00000435532 ALKAL2Q6UX46 152 aa13.7□□□□□ -0.22
NEDD4-202ENST00000435532 OR4C16Q8NGL9 310 aa13.7□□□□□ -0.22
NEDD4-202ENST00000435532 PECRQ9BY49 303 aa13.7□□□□□ -0.22
NEDD4-202ENST00000435532 WIPI2Q9Y4P8 454 aa13.7□□□□□ -0.22
NEDD4-202ENST00000435532 AKR1C3P42330 323 aa13.7□□□□□ -0.22
NEDD4-202ENST00000435532 ACAA2P42765 397 aaKnown RBP13.7□□□□□ -0.22
NEDD4-202ENST00000435532 LRFN3Q9BTN0 628 aa13.7□□□□□ -0.22
NEDD4-202ENST00000435532 BRCA1P38398 1863 aaKnown RBP13.7□□□□□ -0.22
NEDD4-202ENST00000435532 GFRA1P56159 465 aa13.7□□□□□ -0.22
NEDD4-202ENST00000435532 HLXQ14774 488 aaPredicted RBP13.7□□□□□ -0.22
NEDD4-202ENST00000435532 ADIPOR1Q96A54 375 aa13.7□□□□□ -0.22
NEDD4-202ENST00000435532 MSL2Q9HCI7 577 aa13.7□□□□□ -0.22
NEDD4-202ENST00000435532 ZNF331Q9NQX6 463 aaPredicted RBP13.7□□□□□ -0.22
NEDD4-202ENST00000435532 PLEKHB1Q9UF11 243 aaPredicted RBP13.7□□□□□ -0.22
NEDD4-202ENST00000435532 MS4A18H0YCH9 400 aa13.69□□□□□ -0.22
NEDD4-202ENST00000435532 FAM87AP0C7U9 286 aa13.69□□□□□ -0.22
NEDD4-202ENST00000435532 MS4A18Q3C1V0 323 aa13.69□□□□□ -0.22
NEDD4-202ENST00000435532 ABHD17AQ96GS6 310 aa13.69□□□□□ -0.22
NEDD4-202ENST00000435532 WISP3O95389 354 aaPredicted RBP13.69□□□□□ -0.22
NEDD4-202ENST00000435532 ARG1P05089 322 aa13.69□□□□□ -0.22
NEDD4-202ENST00000435532 TAGLN2P37802 199 aaKnown RBP13.69□□□□□ -0.22
NEDD4-202ENST00000435532 OR5I1Q13606 314 aa13.69□□□□□ -0.22
NEDD4-202ENST00000435532 ACOT7LQ6ZUV0 252 aa13.69□□□□□ -0.22
NEDD4-202ENST00000435532 PXT1Q8NFP0 134 aa13.69□□□□□ -0.22
NEDD4-202ENST00000435532 DYNLRB2Q8TF09 96 aa13.69□□□□□ -0.22
NEDD4-202ENST00000435532 GP6Q9HCN6 339 aa13.69□□□□□ -0.22
NEDD4-202ENST00000435532 C20orf202A1L168 122 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms