RNA–Protein interactions for RNA: ENST00000434667.3

SCAF4-203, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 3,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-203ENST00000434667 PLPP5Q8NEB5 264 aa9.15□□□□□ -0.95
SCAF4-203ENST00000434667 SCGB1C1Q8TD33 95 aa9.15□□□□□ -0.95
SCAF4-203ENST00000434667 GPBAR1Q8TDU6 330 aa9.15□□□□□ -0.95
SCAF4-203ENST00000434667 LMX1AQ8TE12 382 aa9.15□□□□□ -0.95
SCAF4-203ENST00000434667 C14orf144Q96I85 54 aa9.15□□□□□ -0.95
SCAF4-203ENST00000434667 SHDQ96IW2 340 aa9.15□□□□□ -0.95
SCAF4-203ENST00000434667 TMPRSS5Q9H3S3 457 aa9.15□□□□□ -0.95
SCAF4-203ENST00000434667 OPA3Q9H6K4 179 aa9.15□□□□□ -0.95
SCAF4-203ENST00000434667 PLEK2Q9NYT0 353 aa9.15□□□□□ -0.95
SCAF4-203ENST00000434667 IL17BQ9UHF5 180 aa9.15□□□□□ -0.95
SCAF4-203ENST00000434667 HDGFL3Q9Y3E1 203 aa9.15□□□□□ -0.95
SCAF4-203ENST00000434667 TRAV34A0A0B4J273 112 aa9.14□□□□□ -0.95
SCAF4-203ENST00000434667 IGHV3-9P01782 118 aa9.14□□□□□ -0.95
SCAF4-203ENST00000434667 IGKV3-11P04433 115 aa9.14□□□□□ -0.95
SCAF4-203ENST00000434667 PATE4P0C8F1 98 aa9.14□□□□□ -0.95
SCAF4-203ENST00000434667 IZUMO4Q1ZYL8 232 aa9.14□□□□□ -0.95
SCAF4-203ENST00000434667 CRIP3Q6Q6R5 217 aa9.14□□□□□ -0.95
SCAF4-203ENST00000434667 KCNG3Q8TAE7 436 aa9.14□□□□□ -0.95
SCAF4-203ENST00000434667 LYZL4Q96KX0 146 aa9.14□□□□□ -0.95
SCAF4-203ENST00000434667 SLC46A1Q96NT5 459 aa9.14□□□□□ -0.95
SCAF4-203ENST00000434667 LRRC61Q9BV99 259 aa9.14□□□□□ -0.95
SCAF4-203ENST00000434667 TUBA4BQ9H853 241 aa9.14□□□□□ -0.95
SCAF4-203ENST00000434667 METTL7AQ9H8H3 244 aa9.14□□□□□ -0.95
SCAF4-203ENST00000434667 GPR173Q9NS66 373 aa9.14□□□□□ -0.95
SCAF4-203ENST00000434667 KCNS2Q9ULS6 477 aa9.14□□□□□ -0.95
SCAF4-203ENST00000434667 JTBO76095 146 aa9.14□□□□□ -0.95
SCAF4-203ENST00000434667 CLDN17P56750 224 aa9.14□□□□□ -0.95
SCAF4-203ENST00000434667 SLC35A1P78382 337 aa9.14□□□□□ -0.95
SCAF4-203ENST00000434667 VAX1Q5SQQ9 334 aa9.14□□□□□ -0.95
SCAF4-203ENST00000434667 DNM1P34Q6PK57 102 aa9.14□□□□□ -0.95
SCAF4-203ENST00000434667 Q6ZS52 159 aa9.14□□□□□ -0.95
SCAF4-203ENST00000434667 CYB561D1Q8N8Q1 229 aa9.14□□□□□ -0.95
SCAF4-203ENST00000434667 OR51H1Q8NH63 302 aa9.14□□□□□ -0.95
SCAF4-203ENST00000434667 ZNF160Q9HCG1 818 aa9.14□□□□□ -0.95
SCAF4-203ENST00000434667 FRG2CA6NGY1 282 aa9.14□□□□□ -0.95
SCAF4-203ENST00000434667 ALG1L2C9J202 215 aa9.14□□□□□ -0.95
SCAF4-203ENST00000434667 H3BQ15 152 aa9.14□□□□□ -0.95
SCAF4-203ENST00000434667 TSPAN2O60636 221 aa9.14□□□□□ -0.95
SCAF4-203ENST00000434667 LCATP04180 440 aa9.14□□□□□ -0.95
SCAF4-203ENST00000434667 DANCRP0C864 163 aa9.14□□□□□ -0.95
SCAF4-203ENST00000434667 LYL1P12980 280 aa9.14□□□□□ -0.95
SCAF4-203ENST00000434667 FOLR1P15328 257 aa9.14□□□□□ -0.95
SCAF4-203ENST00000434667 VEGFBP49765 207 aa9.14□□□□□ -0.95
SCAF4-203ENST00000434667 ZXDAP98168 799 aa9.14□□□□□ -0.95
SCAF4-203ENST00000434667 DLX2Q07687 328 aaPredicted RBP9.14□□□□□ -0.95
SCAF4-203ENST00000434667 ETFRF1Q6IPR1 90 aa9.14□□□□□ -0.95
SCAF4-203ENST00000434667 H1FNTQ75WM6 255 aaPredicted RBP9.14□□□□□ -0.95
SCAF4-203ENST00000434667 GRINAQ7Z429 371 aa9.14□□□□□ -0.95
SCAF4-203ENST00000434667 SLC39A7Q92504 469 aa9.14□□□□□ -0.95
SCAF4-203ENST00000434667 SERINC1Q9NRX5 453 aa9.14□□□□□ -0.95
SCAF4-203ENST00000434667 CUTCQ9NTM9 273 aa9.14□□□□□ -0.95
SCAF4-203ENST00000434667 AK3Q9UIJ7 227 aa9.14□□□□□ -0.95
SCAF4-203ENST00000434667 PCNX1Q96RV3 2341 aa9.13□□□□□ -0.95
SCAF4-203ENST00000434667 LOC400499M0QZD8 3231 aa9.13□□□□□ -0.95
SCAF4-203ENST00000434667 CCDC187A0A096LP49 1063 aa9.13□□□□□ -0.95
SCAF4-203ENST00000434667 ZNF587BE7ETH6 402 aa9.13□□□□□ -0.95
SCAF4-203ENST00000434667 TCAPO15273 167 aa9.13□□□□□ -0.95
SCAF4-203ENST00000434667 SSSCA1O60232 199 aa9.13□□□□□ -0.95
SCAF4-203ENST00000434667 OR5H8P0DN80 308 aa9.13□□□□□ -0.95
SCAF4-203ENST00000434667 MTCP1P56278 107 aa9.13□□□□□ -0.95
SCAF4-203ENST00000434667 TGFBR3Q03167 851 aa9.13□□□□□ -0.95
SCAF4-203ENST00000434667 KHDC3LQ587J8 217 aa9.13□□□□□ -0.95
SCAF4-203ENST00000434667 SLC22A25Q6T423 547 aa9.13□□□□□ -0.95
SCAF4-203ENST00000434667 HEPN1Q6WQI6 88 aa9.13□□□□□ -0.95
SCAF4-203ENST00000434667 PTX4Q96A99 478 aa9.13□□□□□ -0.95
SCAF4-203ENST00000434667 OR5B12Q96R08 314 aa9.13□□□□□ -0.95
SCAF4-203ENST00000434667 SLC35B3Q9H1N7 401 aa9.13□□□□□ -0.95
SCAF4-203ENST00000434667 PRDM13Q9H4Q3 707 aa9.13□□□□□ -0.95
SCAF4-203ENST00000434667 C1orf123Q9NWV4 160 aa9.13□□□□□ -0.95
SCAF4-203ENST00000434667 DNAJB11Q9UBS4 358 aa9.13□□□□□ -0.95
SCAF4-203ENST00000434667 PKDREJQ9NTG1 2253 aa9.13□□□□□ -0.95
SCAF4-203ENST00000434667 CADP27708 2225 aa9.13□□□□□ -0.95
SCAF4-203ENST00000434667 YKT6O15498 198 aa9.13□□□□□ -0.95
SCAF4-203ENST00000434667 HIST1H2BKO60814 126 aa9.13□□□□□ -0.95
SCAF4-203ENST00000434667 MT-ATP6P00846 226 aa9.13□□□□□ -0.95
SCAF4-203ENST00000434667 IGHV4-34P06331 123 aa9.13□□□□□ -0.95
SCAF4-203ENST00000434667 HIST1H2BJP06899 126 aa9.13□□□□□ -0.95
SCAF4-203ENST00000434667 HIST1H2BOP23527 126 aa9.13□□□□□ -0.95
SCAF4-203ENST00000434667 MPZP25189 248 aa9.13□□□□□ -0.95
SCAF4-203ENST00000434667 HIST1H2BBP33778 126 aa9.13□□□□□ -0.95
SCAF4-203ENST00000434667 HIST1H2BDP58876 126 aa9.13□□□□□ -0.95
SCAF4-203ENST00000434667 HIST1H2BCP62807 126 aa9.13□□□□□ -0.95
SCAF4-203ENST00000434667 HIST2H2BEQ16778 126 aa9.13□□□□□ -0.95
SCAF4-203ENST00000434667 TMEM176BQ3YBM2 270 aaPredicted RBP9.13□□□□□ -0.95
SCAF4-203ENST00000434667 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.13□□□□□ -0.95
SCAF4-203ENST00000434667 THRSPQ92748 146 aa9.13□□□□□ -0.95
SCAF4-203ENST00000434667 HIST1H2BHQ93079 126 aa9.13□□□□□ -0.95
SCAF4-203ENST00000434667 HIST1H2BNQ99877 126 aa9.13□□□□□ -0.95
SCAF4-203ENST00000434667 HIST1H2BMQ99879 126 aa9.13□□□□□ -0.95
SCAF4-203ENST00000434667 ZNF107Q9UII5 783 aaPredicted RBP9.13□□□□□ -0.95
SCAF4-203ENST00000434667 LAMP3Q9UQV4 416 aa9.13□□□□□ -0.95
SCAF4-203ENST00000434667 EXPH5Q8NEV8 1989 aa9.13□□□□□ -0.95
SCAF4-203ENST00000434667 ZNF729A6NN14 1252 aaPredicted RBP9.13□□□□□ -0.95
SCAF4-203ENST00000434667 SPINK4O60575 86 aa9.13□□□□□ -0.95
SCAF4-203ENST00000434667 SLC6A8P48029 635 aa9.13□□□□□ -0.95
SCAF4-203ENST00000434667 CSNK1EP49674 416 aaKnown RBP9.13□□□□□ -0.95
SCAF4-203ENST00000434667 MYBPHQ13203 477 aa9.13□□□□□ -0.95
SCAF4-203ENST00000434667 PIGYQ3MUY2 71 aa9.13□□□□□ -0.95
SCAF4-203ENST00000434667 OR1J1Q8NGS3 322 aa9.13□□□□□ -0.95
SCAF4-203ENST00000434667 RTN4IP1Q8WWV3 396 aaPredicted RBP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms