RNA–Protein interactions for RNA: ENST00000430711.5

COL28A1-202, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 5

Gene COL28A1, Length 2,323 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-202ENST00000430711 DEFB126Q9BYW3 111 aa6.21□□□□□ -1.42
COL28A1-202ENST00000430711 MAGT1Q9H0U3 335 aa6.21□□□□□ -1.42
COL28A1-202ENST00000430711 NELFAQ9H3P2 528 aa6.21□□□□□ -1.42
COL28A1-202ENST00000430711 MOB1AQ9H8S9 216 aa6.21□□□□□ -1.42
COL28A1-202ENST00000430711 FOXD3Q9UJU5 478 aaPredicted RBP6.21□□□□□ -1.42
COL28A1-202ENST00000430711 PADI1Q9ULC6 663 aa6.21□□□□□ -1.42
COL28A1-202ENST00000430711 PRR14LQ5THK1 2151 aa6.2□□□□□ -1.42
COL28A1-202ENST00000430711 PINLYPA6NC86 204 aa6.2□□□□□ -1.42
COL28A1-202ENST00000430711 DHHO43323 396 aa6.2□□□□□ -1.42
COL28A1-202ENST00000430711 SNAPC5O75971 98 aa6.2□□□□□ -1.42
COL28A1-202ENST00000430711 ZFAND5O76080 213 aa6.2□□□□□ -1.42
COL28A1-202ENST00000430711 OR13C7P0DN81 318 aa6.2□□□□□ -1.42
COL28A1-202ENST00000430711 EDN3P14138 238 aa6.2□□□□□ -1.42
COL28A1-202ENST00000430711 OMGP23515 440 aa6.2□□□□□ -1.42
COL28A1-202ENST00000430711 CHATP28329 748 aa6.2□□□□□ -1.42
COL28A1-202ENST00000430711 CBX5P45973 191 aa6.2□□□□□ -1.42
COL28A1-202ENST00000430711 MEOX2P50222 304 aa6.2□□□□□ -1.42
COL28A1-202ENST00000430711 ZNF92Q03936 586 aa6.2□□□□□ -1.42
COL28A1-202ENST00000430711 GTF3C1Q12789 2109 aa6.2□□□□□ -1.42
COL28A1-202ENST00000430711 AVPI1Q5T686 147 aa6.2□□□□□ -1.42
COL28A1-202ENST00000430711 IL34Q6ZMJ4 242 aa6.2□□□□□ -1.42
COL28A1-202ENST00000430711 SULF2Q8IWU5 870 aa6.2□□□□□ -1.42
COL28A1-202ENST00000430711 CCDC36Q8IYA8 594 aa6.2□□□□□ -1.42
COL28A1-202ENST00000430711 FNDC9Q8TBE3 224 aa6.2□□□□□ -1.42
COL28A1-202ENST00000430711 TMEM171Q8WVE6 324 aa6.2□□□□□ -1.42
COL28A1-202ENST00000430711 MR1Q95460 341 aa6.2□□□□□ -1.42
COL28A1-202ENST00000430711 MSI2Q96DH6 328 aaKnown RBP6.2□□□□□ -1.42
COL28A1-202ENST00000430711 ZNF845Q96IR2 970 aaPredicted RBP6.2□□□□□ -1.42
COL28A1-202ENST00000430711 URM1Q9BTM9 101 aaKnown RBP6.2□□□□□ -1.42
COL28A1-202ENST00000430711 CHRDQ9H2X0 955 aa6.2□□□□□ -1.42
COL28A1-202ENST00000430711 SPACA1Q9HBV2 294 aa6.2□□□□□ -1.42
COL28A1-202ENST00000430711 CRLF2Q9HC73 371 aa6.2□□□□□ -1.42
COL28A1-202ENST00000430711 RPS10P5Q9NQ39 176 aa6.2□□□□□ -1.42
COL28A1-202ENST00000430711 SLC2A9Q9NRM0 540 aa6.2□□□□□ -1.42
COL28A1-202ENST00000430711 TUBD1Q9UJT1 453 aa6.2□□□□□ -1.42
COL28A1-202ENST00000430711 IGKV1D-13A0A0B4J2D9 117 aa6.2□□□□□ -1.42
COL28A1-202ENST00000430711 FAM24AA6NFZ4 105 aa6.2□□□□□ -1.42
COL28A1-202ENST00000430711 ZNF850A8MQ14 1090 aa6.2□□□□□ -1.42
COL28A1-202ENST00000430711 ZNF727A8MUV8 499 aa6.2□□□□□ -1.42
COL28A1-202ENST00000430711 K7ESF4 209 aa6.2□□□□□ -1.42
COL28A1-202ENST00000430711 TNFSF12O43508 249 aa6.2□□□□□ -1.42
COL28A1-202ENST00000430711 LILRA1O75019 489 aa6.2□□□□□ -1.42
COL28A1-202ENST00000430711 KLF7O75840 302 aaPredicted RBP6.2□□□□□ -1.42
COL28A1-202ENST00000430711 SNAPINO95295 136 aa6.2□□□□□ -1.42
COL28A1-202ENST00000430711 IGKV1-13P0DP09 117 aa6.2□□□□□ -1.42
COL28A1-202ENST00000430711 ZNF32P17041 273 aa6.2□□□□□ -1.42
COL28A1-202ENST00000430711 AADACP22760 399 aa6.2□□□□□ -1.42
COL28A1-202ENST00000430711 CTSSP25774 331 aa6.2□□□□□ -1.42
COL28A1-202ENST00000430711 LMO1P25800 156 aa6.2□□□□□ -1.42
COL28A1-202ENST00000430711 DUSP1P28562 367 aa6.2□□□□□ -1.42
COL28A1-202ENST00000430711 ALDH3B1P43353 468 aa6.2□□□□□ -1.42
COL28A1-202ENST00000430711 AFF3P51826 1226 aaKnown RBP6.2□□□□□ -1.42
COL28A1-202ENST00000430711 OR2B8PP59922 312 aa6.2□□□□□ -1.42
COL28A1-202ENST00000430711 HIST1H3AP68431 136 aa6.2□□□□□ -1.42
COL28A1-202ENST00000430711 RUNX1Q01196 453 aa6.2□□□□□ -1.42
COL28A1-202ENST00000430711 TLE1Q04724 770 aa6.2□□□□□ -1.42
COL28A1-202ENST00000430711 Q0VFX4 171 aa6.2□□□□□ -1.42
COL28A1-202ENST00000430711 CLINT1Q14677 625 aa6.2□□□□□ -1.42
COL28A1-202ENST00000430711 PEA15Q15121 130 aa6.2□□□□□ -1.42
COL28A1-202ENST00000430711 CCDC157Q569K6 752 aa6.2□□□□□ -1.42
COL28A1-202ENST00000430711 HIST2H3PS2Q5TEC6 136 aa6.2□□□□□ -1.42
COL28A1-202ENST00000430711 ZNF343Q6P1L6 599 aa6.2□□□□□ -1.42
COL28A1-202ENST00000430711 MRPL14Q6P1L8 145 aaKnown RBP6.2□□□□□ -1.42
COL28A1-202ENST00000430711 TMEM182Q6ZP80 229 aaPredicted RBP6.2□□□□□ -1.42
COL28A1-202ENST00000430711 HIST2H3AQ71DI3 136 aa6.2□□□□□ -1.42
COL28A1-202ENST00000430711 RABEPKQ7Z6M1 372 aa6.2□□□□□ -1.42
COL28A1-202ENST00000430711 FAM24BQ8N5W8 94 aa6.2□□□□□ -1.42
COL28A1-202ENST00000430711 SLC35G3Q8N808 338 aa6.2□□□□□ -1.42
COL28A1-202ENST00000430711 OR5T2Q8NGG2 359 aa6.2□□□□□ -1.42
COL28A1-202ENST00000430711 LYPD6BQ8NI32 183 aa6.2□□□□□ -1.42
COL28A1-202ENST00000430711 GLRX2Q9NS18 164 aa6.2□□□□□ -1.42
COL28A1-202ENST00000430711 PARPBPQ9NWS1 579 aa6.2□□□□□ -1.42
COL28A1-202ENST00000430711 TIMM10BQ9Y5J6 103 aa6.2□□□□□ -1.42
COL28A1-202ENST00000430711 HS3ST3B1Q9Y662 390 aa6.2□□□□□ -1.42
COL28A1-202ENST00000430711 RIF1Q5UIP0 2472 aaKnown RBP6.2□□□□□ -1.42
COL28A1-202ENST00000430711 IGSF23A1L1A6 192 aa6.19□□□□□ -1.42
COL28A1-202ENST00000430711 C7orf77A4D0Y5 90 aa6.19□□□□□ -1.42
COL28A1-202ENST00000430711 NKX2-6A6NCS4 301 aa6.19□□□□□ -1.42
COL28A1-202ENST00000430711 IFITM10A6NMD0 228 aa6.19□□□□□ -1.42
COL28A1-202ENST00000430711 TERTO14746 1132 aaKnown RBP6.19□□□□□ -1.42
COL28A1-202ENST00000430711 SYNGR3O43761 229 aa6.19□□□□□ -1.42
COL28A1-202ENST00000430711 CST4P01036 141 aa6.19□□□□□ -1.42
COL28A1-202ENST00000430711 COX6A1P12074 109 aa6.19□□□□□ -1.42
COL28A1-202ENST00000430711 LIFP15018 202 aa6.19□□□□□ -1.42
COL28A1-202ENST00000430711 SNCAP37840 140 aa6.19□□□□□ -1.42
COL28A1-202ENST00000430711 B3GALT5-AS1P59052 145 aa6.19□□□□□ -1.42
COL28A1-202ENST00000430711 TAS2R46P59540 309 aa6.19□□□□□ -1.42
COL28A1-202ENST00000430711 B2MP61769 119 aa6.19□□□□□ -1.42
COL28A1-202ENST00000430711 POLR2GP62487 172 aaKnown RBP eCLIP6.19□□□□□ -1.42
COL28A1-202ENST00000430711 GRB2P62993 217 aaKnown RBP6.19□□□□□ -1.42
COL28A1-202ENST00000430711 CYCSP99999 105 aaKnown RBP6.19□□□□□ -1.42
COL28A1-202ENST00000430711 CXorf66Q5JRM2 361 aaPredicted RBP6.19□□□□□ -1.42
COL28A1-202ENST00000430711 C10orf128Q5T292 105 aa6.19□□□□□ -1.42
COL28A1-202ENST00000430711 ADPRHL1Q8NDY3 354 aa6.19□□□□□ -1.42
COL28A1-202ENST00000430711 CADM4Q8NFZ8 388 aa6.19□□□□□ -1.42
COL28A1-202ENST00000430711 UBALD1Q8TB05 177 aa6.19□□□□□ -1.42
COL28A1-202ENST00000430711 RTN4IP1Q8WWV3 396 aaPredicted RBP6.19□□□□□ -1.42
COL28A1-202ENST00000430711 ZNF488Q96MN9 340 aa6.19□□□□□ -1.42
COL28A1-202ENST00000430711 ULBP2Q9BZM5 246 aa6.19□□□□□ -1.42
COL28A1-202ENST00000430711 DEPPQ9NTK1 212 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms