RNA–Protein interactions for RNA: ENST00000430118.1

HMGB3-203, Transcript of high mobility group box 3, humanhuman

TSL 1 (best)

Gene HMGB3, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-203ENST00000430118 E7ESA3 106 aa3.24□□□□□ -1.89
HMGB3-203ENST00000430118 TEX46H3BTG2 121 aa3.24□□□□□ -1.89
HMGB3-203ENST00000430118 PDCD5O14737 125 aa3.24□□□□□ -1.89
HMGB3-203ENST00000430118 ORC5O43913 435 aa3.24□□□□□ -1.89
HMGB3-203ENST00000430118 EFNA2O43921 213 aa3.24□□□□□ -1.89
HMGB3-203ENST00000430118 TIMM8AO60220 97 aaPredicted RBP3.24□□□□□ -1.89
HMGB3-203ENST00000430118 SRPX2O60687 465 aaPredicted RBP3.24□□□□□ -1.89
HMGB3-203ENST00000430118 GGCTO75223 188 aaKnown RBP3.24□□□□□ -1.89
HMGB3-203ENST00000430118 CTAG2O75638 210 aa3.24□□□□□ -1.89
HMGB3-203ENST00000430118 SC5DO75845 299 aa3.24□□□□□ -1.89
HMGB3-203ENST00000430118 IFNA17P01571 189 aa3.24□□□□□ -1.89
HMGB3-203ENST00000430118 IGHV2-5P01817 119 aa3.24□□□□□ -1.89
HMGB3-203ENST00000430118 TRBC1P01850 177 aa3.24□□□□□ -1.89
HMGB3-203ENST00000430118 IFNA6P05013 189 aa3.24□□□□□ -1.89
HMGB3-203ENST00000430118 BPGMP07738 259 aa3.24□□□□□ -1.89
HMGB3-203ENST00000430118 HTR1AP08908 422 aa3.24□□□□□ -1.89
HMGB3-203ENST00000430118 NMBP08949 121 aa3.24□□□□□ -1.89
HMGB3-203ENST00000430118 CTXN2P0C2S0 81 aa3.24□□□□□ -1.89
HMGB3-203ENST00000430118 STAG3L3P0CL85 134 aa3.24□□□□□ -1.89
HMGB3-203ENST00000430118 UMPSP11172 480 aa3.24□□□□□ -1.89
HMGB3-203ENST00000430118 ABOP16442 354 aa3.24□□□□□ -1.89
HMGB3-203ENST00000430118 HOXB6P17509 224 aaKnown RBP3.24□□□□□ -1.89
HMGB3-203ENST00000430118 DTYMKP23919 212 aa3.24□□□□□ -1.89
HMGB3-203ENST00000430118 GABRR1P24046 479 aa3.24□□□□□ -1.89
HMGB3-203ENST00000430118 FASP25445 335 aa3.24□□□□□ -1.89
HMGB3-203ENST00000430118 MPIP34949 423 aa3.24□□□□□ -1.89
HMGB3-203ENST00000430118 RPL13AP40429 203 aaKnown RBP3.24□□□□□ -1.89
HMGB3-203ENST00000430118 NUDT2P50583 147 aa3.24□□□□□ -1.89
HMGB3-203ENST00000430118 TDGF1P3P51864 188 aa3.24□□□□□ -1.89
HMGB3-203ENST00000430118 EFNA3P52797 238 aa3.24□□□□□ -1.89
HMGB3-203ENST00000430118 SEC61GP60059 68 aa3.24□□□□□ -1.89
HMGB3-203ENST00000430118 RPL8P62917 257 aaKnown RBP3.24□□□□□ -1.89
HMGB3-203ENST00000430118 PDIA2Q13087 525 aaKnown RBP3.24□□□□□ -1.89
HMGB3-203ENST00000430118 HNRNPA0Q13151 305 aaKnown RBP3.24□□□□□ -1.89
HMGB3-203ENST00000430118 LAGE3Q14657 143 aa3.24□□□□□ -1.89
HMGB3-203ENST00000430118 SLC25A52Q3SY17 297 aa3.24□□□□□ -1.89
HMGB3-203ENST00000430118 TIMM50Q3ZCQ8 353 aa3.24□□□□□ -1.89
HMGB3-203ENST00000430118 VPS26BQ4G0F5 336 aa3.24□□□□□ -1.89
HMGB3-203ENST00000430118 PYCR3Q53H96 274 aa3.24□□□□□ -1.89
HMGB3-203ENST00000430118 SAMD4BQ5PRF9 694 aaKnown RBP3.24□□□□□ -1.89
HMGB3-203ENST00000430118 C1orf220Q5T0J3 134 aa3.24□□□□□ -1.89
HMGB3-203ENST00000430118 C9orf66Q5T8R8 295 aa3.24□□□□□ -1.89
HMGB3-203ENST00000430118 OR4F3Q6IEY1 312 aa3.24□□□□□ -1.89
HMGB3-203ENST00000430118 LCN8Q6JVE9 175 aa3.24□□□□□ -1.89
HMGB3-203ENST00000430118 HAGHLQ6PII5 290 aaPredicted RBP3.24□□□□□ -1.89
HMGB3-203ENST00000430118 PLET1Q6UQ28 207 aa3.24□□□□□ -1.89
HMGB3-203ENST00000430118 IGFL2Q6UWQ7 119 aa3.24□□□□□ -1.89
HMGB3-203ENST00000430118 BAIAP2L2Q6UXY1 529 aa3.24□□□□□ -1.89
HMGB3-203ENST00000430118 MBOAT1Q6ZNC8 495 aa3.24□□□□□ -1.89
HMGB3-203ENST00000430118 H2BFWTQ7Z2G1 175 aa3.24□□□□□ -1.89
HMGB3-203ENST00000430118 SVBPQ8N300 66 aa3.24□□□□□ -1.89
HMGB3-203ENST00000430118 GPR137CQ8N3F9 429 aa3.24□□□□□ -1.89
HMGB3-203ENST00000430118 CBR4Q8N4T8 237 aa3.24□□□□□ -1.89
HMGB3-203ENST00000430118 Q8NBF4 154 aa3.24□□□□□ -1.89
HMGB3-203ENST00000430118 C19orf18Q8NEA5 215 aa3.24□□□□□ -1.89
HMGB3-203ENST00000430118 OR2V1Q8NHB1 315 aa3.24□□□□□ -1.89
HMGB3-203ENST00000430118 RFESDQ8TAC1 157 aa3.24□□□□□ -1.89
HMGB3-203ENST00000430118 ZNF671Q8TAW3 534 aa3.24□□□□□ -1.89
HMGB3-203ENST00000430118 CNIH3Q8TBE1 160 aa3.24□□□□□ -1.89
HMGB3-203ENST00000430118 LCN9Q8WX39 176 aa3.24□□□□□ -1.89
HMGB3-203ENST00000430118 TMEM158Q8WZ71 300 aa3.24□□□□□ -1.89
HMGB3-203ENST00000430118 SLC38A4Q969I6 547 aa3.24□□□□□ -1.89
HMGB3-203ENST00000430118 ERMAPQ96PL5 475 aaPredicted RBP3.24□□□□□ -1.89
HMGB3-203ENST00000430118 RNF157Q96PX1 679 aa3.24□□□□□ -1.89
HMGB3-203ENST00000430118 SLC38A2Q96QD8 506 aa3.24□□□□□ -1.89
HMGB3-203ENST00000430118 OR5B2Q96R09 309 aa3.24□□□□□ -1.89
HMGB3-203ENST00000430118 TEAD3Q99594 435 aa3.24□□□□□ -1.89
HMGB3-203ENST00000430118 COPS8Q99627 209 aa3.24□□□□□ -1.89
HMGB3-203ENST00000430118 EBF4Q9BQW3 602 aa3.24□□□□□ -1.89
HMGB3-203ENST00000430118 SLC35A5Q9BS91 424 aa3.24□□□□□ -1.89
HMGB3-203ENST00000430118 MARVELD1Q9BSK0 173 aa3.24□□□□□ -1.89
HMGB3-203ENST00000430118 SYT11Q9BT88 431 aa3.24□□□□□ -1.89
HMGB3-203ENST00000430118 CHRDL1Q9BU40 450 aa3.24□□□□□ -1.89
HMGB3-203ENST00000430118 ZNF385DQ9H6B1 395 aa3.24□□□□□ -1.89
HMGB3-203ENST00000430118 JPT2Q9H910 190 aa3.24□□□□□ -1.89
HMGB3-203ENST00000430118 NMNAT1Q9HAN9 279 aaPredicted RBP3.24□□□□□ -1.89
HMGB3-203ENST00000430118 ADGRL4Q9HBW9 690 aa3.24□□□□□ -1.89
HMGB3-203ENST00000430118 MRPL47Q9HD33 250 aaKnown RBP3.24□□□□□ -1.89
HMGB3-203ENST00000430118 RAB18Q9NP72 206 aa3.24□□□□□ -1.89
HMGB3-203ENST00000430118 NLE1Q9NVX2 485 aaPredicted RBP3.24□□□□□ -1.89
HMGB3-203ENST00000430118 KLHL28Q9NXS3 571 aa3.24□□□□□ -1.89
HMGB3-203ENST00000430118 USE1Q9NZ43 259 aa3.24□□□□□ -1.89
HMGB3-203ENST00000430118 CALML5Q9NZT1 146 aa3.24□□□□□ -1.89
HMGB3-203ENST00000430118 RNF24Q9Y225 148 aa3.24□□□□□ -1.89
HMGB3-203ENST00000430118 COQ4Q9Y3A0 265 aa3.24□□□□□ -1.89
HMGB3-203ENST00000430118 MMACHCQ9Y4U1 282 aa3.24□□□□□ -1.89
HMGB3-203ENST00000430118 TIMM10BQ9Y5J6 103 aa3.24□□□□□ -1.89
HMGB3-203ENST00000430118 ANKRD36A6QL64 1941 aa3.24□□□□□ -1.89
HMGB3-203ENST00000430118 TACC2O95359 2948 aa3.24□□□□□ -1.89
HMGB3-203ENST00000430118 PRRC2CQ9Y520 2896 aaKnown RBP3.24□□□□□ -1.89
HMGB3-203ENST00000430118 PPIAL4EA0A075B759 164 aa3.23□□□□□ -1.89
HMGB3-203ENST00000430118 IGHV3OR16-10A0A075B7F0 116 aa3.23□□□□□ -1.89
HMGB3-203ENST00000430118 EFCAB9A8MZ26 197 aa3.23□□□□□ -1.89
HMGB3-203ENST00000430118 C1orf196B1AJZ1 125 aa3.23□□□□□ -1.89
HMGB3-203ENST00000430118 FAM220BPB1ANY3 271 aa3.23□□□□□ -1.89
HMGB3-203ENST00000430118 TMEM238C9JI98 176 aa3.23□□□□□ -1.89
HMGB3-203ENST00000430118 G3V4G9 280 aa3.23□□□□□ -1.89
HMGB3-203ENST00000430118 H7C417 338 aa3.23□□□□□ -1.89
HMGB3-203ENST00000430118 C19orf84I3L1E1 186 aa3.23□□□□□ -1.89
HMGB3-203ENST00000430118 K7EP13 123 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms