RNA–Protein interactions for RNA: ENST00000430085.5

CALD1-207, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-207ENST00000430085 EDARQ9UNE0 448 aa12.21□□□□□ -0.45
CALD1-207ENST00000430085 LRP5LA4QPB2 252 aa12.21□□□□□ -0.46
CALD1-207ENST00000430085 TIMM8AO60220 97 aaPredicted RBP12.21□□□□□ -0.46
CALD1-207ENST00000430085 FAM27E3Q08E93 113 aa12.21□□□□□ -0.46
CALD1-207ENST00000430085 ALKBH6Q3KRA9 238 aa12.21□□□□□ -0.46
CALD1-207ENST00000430085 C3orf36Q3SXR2 165 aa12.21□□□□□ -0.46
CALD1-207ENST00000430085 NHLRC3Q5JS37 347 aa12.21□□□□□ -0.46
CALD1-207ENST00000430085 ATPAF1Q5TC12 328 aaPredicted RBP12.21□□□□□ -0.46
CALD1-207ENST00000430085 BRICD5Q6PL45 260 aa12.21□□□□□ -0.46
CALD1-207ENST00000430085 ZDHHC22Q8N966 263 aa12.21□□□□□ -0.46
CALD1-207ENST00000430085 OR5AP2Q8NGF4 316 aa12.21□□□□□ -0.46
CALD1-207ENST00000430085 CHST6Q9GZX3 395 aa12.21□□□□□ -0.46
CALD1-207ENST00000430085 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.2□□□□□ -0.46
CALD1-207ENST00000430085 F8VVB4 439 aa12.2□□□□□ -0.46
CALD1-207ENST00000430085 F8VWA3 439 aa12.2□□□□□ -0.46
CALD1-207ENST00000430085 CRYAAP02489 173 aa12.2□□□□□ -0.46
CALD1-207ENST00000430085 C1QBP02746 253 aa12.2□□□□□ -0.46
CALD1-207ENST00000430085 PRKACAP17612 351 aa12.2□□□□□ -0.46
CALD1-207ENST00000430085 DTYMKP23919 212 aa12.2□□□□□ -0.46
CALD1-207ENST00000430085 FABP6P51161 128 aa12.2□□□□□ -0.46
CALD1-207ENST00000430085 ARPC4P59998 168 aa12.2□□□□□ -0.46
CALD1-207ENST00000430085 KLRB1Q12918 225 aa12.2□□□□□ -0.46
CALD1-207ENST00000430085 KCNJ8Q15842 424 aa12.2□□□□□ -0.46
CALD1-207ENST00000430085 MPV17LQ2QL34 196 aa12.2□□□□□ -0.46
CALD1-207ENST00000430085 C1QTNF12Q5T7M4 302 aa12.2□□□□□ -0.46
CALD1-207ENST00000430085 OR8G5Q8NG78 346 aa12.2□□□□□ -0.46
CALD1-207ENST00000430085 EHFQ9NZC4 300 aa12.2□□□□□ -0.46
CALD1-207ENST00000430085 RALYQ9UKM9 306 aaKnown RBP12.2□□□□□ -0.46
CALD1-207ENST00000430085 FZR1Q9UM11 496 aa12.2□□□□□ -0.46
CALD1-207ENST00000430085 POLDIP2Q9Y2S7 368 aa12.2□□□□□ -0.46
CALD1-207ENST00000430085 SPEF1Q9Y4P9 236 aa12.2□□□□□ -0.46
CALD1-207ENST00000430085 MEIKINA0A087WXM9 373 aa12.19□□□□□ -0.46
CALD1-207ENST00000430085 OR2AT4A6NND4 320 aa12.19□□□□□ -0.46
CALD1-207ENST00000430085 H3BUI4 141 aa12.19□□□□□ -0.46
CALD1-207ENST00000430085 TPD52L2O43399 206 aaKnown RBP12.19□□□□□ -0.46
CALD1-207ENST00000430085 OR4E1P0C645 316 aa12.19□□□□□ -0.46
CALD1-207ENST00000430085 KITLGP21583 273 aa12.19□□□□□ -0.46
CALD1-207ENST00000430085 PMELP40967 661 aa12.19□□□□□ -0.46
CALD1-207ENST00000430085 IKZF1Q13422 519 aa12.19□□□□□ -0.46
CALD1-207ENST00000430085 MBNL2Q5VZF2 373 aaKnown RBP12.19□□□□□ -0.46
CALD1-207ENST00000430085 LINC00596Q86U02 117 aa12.19□□□□□ -0.46
CALD1-207ENST00000430085 LIX1LQ8IVB5 337 aa12.19□□□□□ -0.46
CALD1-207ENST00000430085 TERB2Q8NHR7 220 aa12.19□□□□□ -0.46
CALD1-207ENST00000430085 CAPSLQ8WWF8 208 aa12.19□□□□□ -0.46
CALD1-207ENST00000430085 DYRK2Q92630 601 aa12.19□□□□□ -0.46
CALD1-207ENST00000430085 PPA2Q9H2U2 334 aa12.19□□□□□ -0.46
CALD1-207ENST00000430085 MYOZ1Q9NP98 299 aaPredicted RBP12.19□□□□□ -0.46
CALD1-207ENST00000430085 ELOVL5Q9NYP7 299 aa12.19□□□□□ -0.46
CALD1-207ENST00000430085 MGAT4CQ9UBM8 478 aa12.19□□□□□ -0.46
CALD1-207ENST00000430085 VSIG4Q9Y279 399 aa12.19□□□□□ -0.46
CALD1-207ENST00000430085 CHD6Q8TD26 2715 aa12.19□□□□□ -0.46
CALD1-207ENST00000430085 TMEM210A6NLX4 147 aa12.19□□□□□ -0.46
CALD1-207ENST00000430085 FCGR3AP08637 254 aa12.19□□□□□ -0.46
CALD1-207ENST00000430085 FAM76BQ5HYJ3 339 aa12.19□□□□□ -0.46
CALD1-207ENST00000430085 RGS7BPQ6MZT1 257 aaPredicted RBP12.19□□□□□ -0.46
CALD1-207ENST00000430085 NCCRP1Q6ZVX7 275 aaPredicted RBP12.19□□□□□ -0.46
CALD1-207ENST00000430085 FAM58AQ8N1B3 248 aa12.19□□□□□ -0.46
CALD1-207ENST00000430085 MUC20Q8N307 709 aaPredicted RBP12.19□□□□□ -0.46
CALD1-207ENST00000430085 SPICQ8N5J4 248 aa12.19□□□□□ -0.46
CALD1-207ENST00000430085 SCCPDHQ8NBX0 429 aa12.19□□□□□ -0.46
CALD1-207ENST00000430085 ZNF431Q8TF32 576 aaPredicted RBP12.19□□□□□ -0.46
CALD1-207ENST00000430085 MRGPRFQ96AM1 343 aa12.19□□□□□ -0.46
CALD1-207ENST00000430085 ZNF486Q96H40 463 aaPredicted RBP12.19□□□□□ -0.46
CALD1-207ENST00000430085 ZNF488Q96MN9 340 aa12.19□□□□□ -0.46
CALD1-207ENST00000430085 ZNF436Q9C0F3 470 aaPredicted RBP12.19□□□□□ -0.46
CALD1-207ENST00000430085 RHOFQ9HBH0 211 aa12.19□□□□□ -0.46
CALD1-207ENST00000430085 C12orf4Q9NQ89 552 aa12.19□□□□□ -0.46
CALD1-207ENST00000430085 ANXA10Q9UJ72 324 aa12.19□□□□□ -0.46
CALD1-207ENST00000430085 SMLR1H3BR10 107 aa12.18□□□□□ -0.46
CALD1-207ENST00000430085 SDCBPO00560 298 aaPredicted RBP12.18□□□□□ -0.46
CALD1-207ENST00000430085 FABP7O15540 132 aa12.18□□□□□ -0.46
CALD1-207ENST00000430085 RHBDL1O75783 438 aa12.18□□□□□ -0.46
CALD1-207ENST00000430085 ERP29P30040 261 aaKnown RBP12.18□□□□□ -0.46
CALD1-207ENST00000430085 CASP6P55212 293 aa12.18□□□□□ -0.46
CALD1-207ENST00000430085 CDK10Q15131 360 aa12.18□□□□□ -0.46
CALD1-207ENST00000430085 IGFBP7Q16270 282 aa12.18□□□□□ -0.46
CALD1-207ENST00000430085 C17orf107Q6ZR85 190 aa12.18□□□□□ -0.46
CALD1-207ENST00000430085 WDR86Q86TI4 376 aa12.18□□□□□ -0.46
CALD1-207ENST00000430085 Q8IYB0 196 aa12.18□□□□□ -0.46
CALD1-207ENST00000430085 UXS1Q8NBZ7 420 aa12.18□□□□□ -0.46
CALD1-207ENST00000430085 SCGB3A2Q96PL1 93 aa12.18□□□□□ -0.46
CALD1-207ENST00000430085 HS3ST6Q96QI5 342 aa12.18□□□□□ -0.46
CALD1-207ENST00000430085 USB1Q9BQ65 265 aaKnown RBP12.18□□□□□ -0.46
CALD1-207ENST00000430085 SPACA1Q9HBV2 294 aa12.18□□□□□ -0.46
CALD1-207ENST00000430085 CHMP1AQ9HD42 196 aaPredicted RBP12.18□□□□□ -0.46
CALD1-207ENST00000430085 IL36RNQ9UBH0 155 aa12.18□□□□□ -0.46
CALD1-207ENST00000430085 H0YL77 283 aa12.17□□□□□ -0.46
CALD1-207ENST00000430085 C16orf97H3BN30 126 aa12.17□□□□□ -0.46
CALD1-207ENST00000430085 GRPP07492 148 aa12.17□□□□□ -0.46
CALD1-207ENST00000430085 ZNF154Q13106 437 aa12.17□□□□□ -0.46
CALD1-207ENST00000430085 DAZAP2Q15038 168 aaPredicted RBP12.17□□□□□ -0.46
CALD1-207ENST00000430085 GRK1Q15835 563 aa12.17□□□□□ -0.46
CALD1-207ENST00000430085 TMEM211Q6ICI0 200 aa12.17□□□□□ -0.46
CALD1-207ENST00000430085 OVCH2Q7RTZ1 564 aa12.17□□□□□ -0.46
CALD1-207ENST00000430085 SLC25A42Q86VD7 318 aa12.17□□□□□ -0.46
CALD1-207ENST00000430085 ZBTB8BQ8NAP8 495 aaPredicted RBP12.17□□□□□ -0.46
CALD1-207ENST00000430085 MARCH1Q8TCQ1 289 aa12.17□□□□□ -0.46
CALD1-207ENST00000430085 RND1Q92730 232 aa12.17□□□□□ -0.46
CALD1-207ENST00000430085 IGKV1D-8A0A087WSZ0 117 aa12.17□□□□□ -0.46
CALD1-207ENST00000430085 FAM221AA4D161 298 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms