RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 TBX15Q96SF7 602 aa13.99□□□□□ -0.17
UBE3D-204ENST00000430071 PCGF1Q9BSM1 259 aa13.99□□□□□ -0.17
UBE3D-204ENST00000430071 TMEM138Q9NPI0 162 aa13.99□□□□□ -0.17
UBE3D-204ENST00000430071 CKLFQ9UBR5 152 aa13.99□□□□□ -0.17
UBE3D-204ENST00000430071 FOXJ3Q9UPW0 622 aa13.99□□□□□ -0.17
UBE3D-204ENST00000430071 DVL1O14640 695 aa13.98□□□□□ -0.17
UBE3D-204ENST00000430071 SPRY1O43609 319 aaPredicted RBP13.98□□□□□ -0.17
UBE3D-204ENST00000430071 NOS1APO75052 506 aaPredicted RBP13.98□□□□□ -0.17
UBE3D-204ENST00000430071 ALDOBP05062 364 aa13.98□□□□□ -0.17
UBE3D-204ENST00000430071 PPIAL4GP0DN37 164 aa13.98□□□□□ -0.17
UBE3D-204ENST00000430071 JUNBP17275 347 aaPredicted RBP13.98□□□□□ -0.17
UBE3D-204ENST00000430071 PRTN3P24158 256 aa13.98□□□□□ -0.17
UBE3D-204ENST00000430071 BDKRB2P30411 391 aa13.98□□□□□ -0.17
UBE3D-204ENST00000430071 PDZK1IP1Q13113 114 aa13.98□□□□□ -0.17
UBE3D-204ENST00000430071 DEFB112Q30KQ8 113 aa13.98□□□□□ -0.17
UBE3D-204ENST00000430071 BATF2Q8N1L9 274 aa13.98□□□□□ -0.17
UBE3D-204ENST00000430071 OR5D18Q8NGL1 313 aa13.98□□□□□ -0.17
UBE3D-204ENST00000430071 ZNF671Q8TAW3 534 aa13.98□□□□□ -0.17
UBE3D-204ENST00000430071 SLAMF9Q96A28 289 aa13.98□□□□□ -0.17
UBE3D-204ENST00000430071 NRIP2Q9BQI9 281 aa13.98□□□□□ -0.17
UBE3D-204ENST00000430071 NEK6Q9HC98 313 aa13.98□□□□□ -0.17
UBE3D-204ENST00000430071 SNTG1Q9NSN8 517 aa13.98□□□□□ -0.17
UBE3D-204ENST00000430071 MTCH1Q9NZJ7 389 aa13.98□□□□□ -0.17
UBE3D-204ENST00000430071 POLDIP2Q9Y2S7 368 aa13.98□□□□□ -0.17
UBE3D-204ENST00000430071 MGAM2Q2M2H8 2515 aa13.98□□□□□ -0.17
UBE3D-204ENST00000430071 IGKV1-12A0A0C4DH73 117 aa13.97□□□□□ -0.17
UBE3D-204ENST00000430071 F8VVB4 439 aa13.97□□□□□ -0.17
UBE3D-204ENST00000430071 F8VWA3 439 aa13.97□□□□□ -0.17
UBE3D-204ENST00000430071 ENSAO43768 121 aaKnown RBP13.97□□□□□ -0.17
UBE3D-204ENST00000430071 ANGPTL7O43827 346 aa13.97□□□□□ -0.17
UBE3D-204ENST00000430071 IGKV1D-12P01611 117 aa13.97□□□□□ -0.17
UBE3D-204ENST00000430071 MAS1P04201 325 aa13.97□□□□□ -0.17
UBE3D-204ENST00000430071 DLX1P56177 255 aa13.97□□□□□ -0.17
UBE3D-204ENST00000430071 ZP1P60852 638 aa13.97□□□□□ -0.17
UBE3D-204ENST00000430071 ERVK11-1P61568 191 aa13.97□□□□□ -0.17
UBE3D-204ENST00000430071 PRB3Q04118 309 aaPredicted RBP13.97□□□□□ -0.17
UBE3D-204ENST00000430071 SLC9A3R2Q15599 337 aa13.97□□□□□ -0.17
UBE3D-204ENST00000430071 HSD17B12Q53GQ0 312 aa13.97□□□□□ -0.17
UBE3D-204ENST00000430071 AWAT1Q58HT5 328 aa13.97□□□□□ -0.17
UBE3D-204ENST00000430071 DDI2Q5TDH0 399 aa13.97□□□□□ -0.17
UBE3D-204ENST00000430071 C9orf139Q6ZV77 190 aa13.97□□□□□ -0.17
UBE3D-204ENST00000430071 BTN2A1Q7KYR7 527 aa13.97□□□□□ -0.17
UBE3D-204ENST00000430071 LRRTM1Q86UE6 522 aa13.97□□□□□ -0.17
UBE3D-204ENST00000430071 FAM216BQ8N7L0 139 aa13.97□□□□□ -0.17
UBE3D-204ENST00000430071 VCX3AQ9NNX9 186 aa13.97□□□□□ -0.17
UBE3D-204ENST00000430071 TRRAPQ9Y4A5 3859 aa13.97□□□□□ -0.17
UBE3D-204ENST00000430071 TMPRSS2O15393 492 aa13.96□□□□□ -0.17
UBE3D-204ENST00000430071 MAGEB3O15480 346 aa13.96□□□□□ -0.17
UBE3D-204ENST00000430071 ACAA1P09110 424 aaPredicted RBP13.96□□□□□ -0.17
UBE3D-204ENST00000430071 NPY4RP50391 375 aa13.96□□□□□ -0.17
UBE3D-204ENST00000430071 ARF6P62330 175 aa13.96□□□□□ -0.17
UBE3D-204ENST00000430071 RBMS3Q6XE24 437 aaKnown RBP13.96□□□□□ -0.17
UBE3D-204ENST00000430071 SATL1Q86VE3 508 aa13.96□□□□□ -0.17
UBE3D-204ENST00000430071 LYPD6Q86Y78 171 aa13.96□□□□□ -0.17
UBE3D-204ENST00000430071 ST8SIA4Q92187 359 aa13.96□□□□□ -0.17
UBE3D-204ENST00000430071 PHYHIPQ92561 330 aa13.96□□□□□ -0.17
UBE3D-204ENST00000430071 CEP19Q96LK0 163 aa13.96□□□□□ -0.17
UBE3D-204ENST00000430071 SIRPDQ9H106 197 aa13.96□□□□□ -0.17
UBE3D-204ENST00000430071 KAAG1Q9UBP8 84 aa13.96□□□□□ -0.17
UBE3D-204ENST00000430071 WNK1Q9H4A3 2382 aa13.96□□□□□ -0.17
UBE3D-204ENST00000430071 CENPVL3A0A0U1RRI6 287 aa13.96□□□□□ -0.18
UBE3D-204ENST00000430071 TRDV1A0A1B0GX56 115 aa13.96□□□□□ -0.18
UBE3D-204ENST00000430071 HKR1P10072 659 aa13.96□□□□□ -0.18
UBE3D-204ENST00000430071 MUC1P15941 1255 aaPredicted RBP13.96□□□□□ -0.18
UBE3D-204ENST00000430071 SRMP19623 302 aa13.96□□□□□ -0.18
UBE3D-204ENST00000430071 GLRA1P23415 457 aa13.96□□□□□ -0.18
UBE3D-204ENST00000430071 OR3A4PP47883 348 aa13.96□□□□□ -0.18
UBE3D-204ENST00000430071 NPBWR2P48146 333 aa13.96□□□□□ -0.18
UBE3D-204ENST00000430071 KCNJ8Q15842 424 aa13.96□□□□□ -0.18
UBE3D-204ENST00000430071 ACP7Q6ZNF0 438 aa13.96□□□□□ -0.18
UBE3D-204ENST00000430071 PDZD9Q8IXQ8 264 aa13.96□□□□□ -0.18
UBE3D-204ENST00000430071 MKXQ8IYA7 352 aa13.96□□□□□ -0.18
UBE3D-204ENST00000430071 C3orf56Q8N813 242 aa13.96□□□□□ -0.18
UBE3D-204ENST00000430071 WDFY2Q96P53 400 aa13.96□□□□□ -0.18
UBE3D-204ENST00000430071 OR51E2Q9H255 320 aa13.96□□□□□ -0.18
UBE3D-204ENST00000430071 HES4Q9HCC6 221 aa13.96□□□□□ -0.18
UBE3D-204ENST00000430071 TCF7L1Q9HCS4 588 aa13.96□□□□□ -0.18
UBE3D-204ENST00000430071 TNFRSF19Q9NS68 423 aa13.96□□□□□ -0.18
UBE3D-204ENST00000430071 KIAA2026Q5HYC2 2103 aa13.95□□□□□ -0.18
UBE3D-204ENST00000430071 NDUFA2O43678 99 aa13.95□□□□□ -0.18
UBE3D-204ENST00000430071 ARL6IP5O75915 188 aa13.95□□□□□ -0.18
UBE3D-204ENST00000430071 TOX4O94842 621 aa13.95□□□□□ -0.18
UBE3D-204ENST00000430071 NXPH2O95156 264 aa13.95□□□□□ -0.18
UBE3D-204ENST00000430071 TMEM225BP0DP42 221 aa13.95□□□□□ -0.18
UBE3D-204ENST00000430071 CD36P16671 472 aa13.95□□□□□ -0.18
UBE3D-204ENST00000430071 BCL3P20749 454 aa13.95□□□□□ -0.18
UBE3D-204ENST00000430071 GALP22466 123 aa13.95□□□□□ -0.18
UBE3D-204ENST00000430071 GADD45AP24522 165 aa13.95□□□□□ -0.18
UBE3D-204ENST00000430071 CALRP27797 417 aaKnown RBP13.95□□□□□ -0.18
UBE3D-204ENST00000430071 ZNF93P35789 620 aaPredicted RBP13.95□□□□□ -0.18
UBE3D-204ENST00000430071 MICBQ29980 383 aa13.95□□□□□ -0.18
UBE3D-204ENST00000430071 STUMQ69YW2 141 aa13.95□□□□□ -0.18
UBE3D-204ENST00000430071 SAXO1Q8IYX7 474 aa13.95□□□□□ -0.18
UBE3D-204ENST00000430071 TNFAIP8L1Q8WVP5 186 aa13.95□□□□□ -0.18
UBE3D-204ENST00000430071 TMIGD2Q96BF3 282 aa13.95□□□□□ -0.18
UBE3D-204ENST00000430071 CPNE2Q96FN4 548 aaPredicted RBP13.95□□□□□ -0.18
UBE3D-204ENST00000430071 GPER1Q99527 375 aa13.95□□□□□ -0.18
UBE3D-204ENST00000430071 RASL12Q9NYN1 266 aa13.95□□□□□ -0.18
UBE3D-204ENST00000430071 NLKQ9UBE8 527 aa13.95□□□□□ -0.18
UBE3D-204ENST00000430071 DNAJB11Q9UBS4 358 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms