RNA–Protein interactions for RNA: ENST00000429650.1

SNRNP200-202, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 2,637 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-202ENST00000429650 LHX6Q9UPM6 363 aa11.55□□□□□ -0.56
SNRNP200-202ENST00000429650 KCNIP3Q9Y2W7 256 aa11.55□□□□□ -0.56
SNRNP200-202ENST00000429650 KLF2Q9Y5W3 355 aaPredicted RBP11.55□□□□□ -0.56
SNRNP200-202ENST00000429650 ZNF716A6NP11 495 aa11.55□□□□□ -0.56
SNRNP200-202ENST00000429650 NRASP01111 189 aa11.55□□□□□ -0.56
SNRNP200-202ENST00000429650 CD5P06127 495 aa11.55□□□□□ -0.56
SNRNP200-202ENST00000429650 SFTA3P0C7M3 94 aa11.55□□□□□ -0.56
SNRNP200-202ENST00000429650 ID4P47928 161 aa11.55□□□□□ -0.56
SNRNP200-202ENST00000429650 BRICD5Q6PL45 260 aa11.55□□□□□ -0.56
SNRNP200-202ENST00000429650 GGNQ86UU5 652 aa11.55□□□□□ -0.56
SNRNP200-202ENST00000429650 CPT1CQ8TCG5 803 aa11.55□□□□□ -0.56
SNRNP200-202ENST00000429650 RTN4IP1Q8WWV3 396 aaPredicted RBP11.55□□□□□ -0.56
SNRNP200-202ENST00000429650 ERGIC1Q969X5 290 aa11.55□□□□□ -0.56
SNRNP200-202ENST00000429650 AGPAT2O15120 278 aa11.54□□□□□ -0.56
SNRNP200-202ENST00000429650 MBPP02686 304 aaPredicted RBP11.54□□□□□ -0.56
SNRNP200-202ENST00000429650 SRD5A2P31213 254 aa11.54□□□□□ -0.56
SNRNP200-202ENST00000429650 F2RL1P55085 397 aa11.54□□□□□ -0.56
SNRNP200-202ENST00000429650 CARD18P57730 90 aa11.54□□□□□ -0.56
SNRNP200-202ENST00000429650 FXYD4P59646 89 aa11.54□□□□□ -0.56
SNRNP200-202ENST00000429650 PSG4Q00888 419 aa11.54□□□□□ -0.56
SNRNP200-202ENST00000429650 ABCA11PQ4W5N1 156 aa11.54□□□□□ -0.56
SNRNP200-202ENST00000429650 Q6ZRG5 221 aa11.54□□□□□ -0.56
SNRNP200-202ENST00000429650 NAXEQ8NCW5 288 aa11.54□□□□□ -0.56
SNRNP200-202ENST00000429650 ZNF845Q96IR2 970 aaPredicted RBP11.54□□□□□ -0.56
SNRNP200-202ENST00000429650 PLEKHA2Q9HB19 425 aa11.54□□□□□ -0.56
SNRNP200-202ENST00000429650 ZFP57Q9NU63 452 aa11.54□□□□□ -0.56
SNRNP200-202ENST00000429650 ZNF175Q9Y473 711 aa11.54□□□□□ -0.56
SNRNP200-202ENST00000429650 SHANK1Q9Y566 2161 aa11.54□□□□□ -0.56
SNRNP200-202ENST00000429650 J3KRW8 73 aa11.54□□□□□ -0.56
SNRNP200-202ENST00000429650 NTN3O00634 580 aaPredicted RBP11.54□□□□□ -0.56
SNRNP200-202ENST00000429650 NFYBP25208 207 aa11.54□□□□□ -0.56
SNRNP200-202ENST00000429650 FAM3AP98173 230 aa11.54□□□□□ -0.56
SNRNP200-202ENST00000429650 TSPO2Q5TGU0 170 aa11.54□□□□□ -0.56
SNRNP200-202ENST00000429650 SLC22A25Q6T423 547 aa11.54□□□□□ -0.56
SNRNP200-202ENST00000429650 AAED1Q7RTV5 226 aa11.54□□□□□ -0.56
SNRNP200-202ENST00000429650 FBXL14Q8N1E6 418 aa11.54□□□□□ -0.56
SNRNP200-202ENST00000429650 OSR2Q8N2R0 312 aa11.54□□□□□ -0.56
SNRNP200-202ENST00000429650 UBAC2Q8NBM4 344 aa11.54□□□□□ -0.56
SNRNP200-202ENST00000429650 OR14L1PQ8NHC6 308 aa11.54□□□□□ -0.56
SNRNP200-202ENST00000429650 SLC39A7Q92504 469 aa11.54□□□□□ -0.56
SNRNP200-202ENST00000429650 HLA-CQ95604 372 aa11.54□□□□□ -0.56
SNRNP200-202ENST00000429650 BCO1Q9HAY6 547 aa11.54□□□□□ -0.56
SNRNP200-202ENST00000429650 LAMA5O15230 3695 aa11.53□□□□□ -0.56
SNRNP200-202ENST00000429650 hCG_38984A0A1B0GV85 526 aa11.53□□□□□ -0.56
SNRNP200-202ENST00000429650 C9JQL5 133 aa11.53□□□□□ -0.56
SNRNP200-202ENST00000429650 E5RGE8 158 aa11.53□□□□□ -0.56
SNRNP200-202ENST00000429650 CFIP05156 583 aa11.53□□□□□ -0.56
SNRNP200-202ENST00000429650 HEXAP06865 529 aa11.53□□□□□ -0.56
SNRNP200-202ENST00000429650 CD80P33681 288 aa11.53□□□□□ -0.56
SNRNP200-202ENST00000429650 RFC3P40938 356 aa11.53□□□□□ -0.56
SNRNP200-202ENST00000429650 PHLDA2Q53GA4 152 aa11.53□□□□□ -0.56
SNRNP200-202ENST00000429650 LYZL2Q7Z4W2 148 aa11.53□□□□□ -0.56
SNRNP200-202ENST00000429650 ZNF100Q8IYN0 542 aa11.53□□□□□ -0.56
SNRNP200-202ENST00000429650 LYPD6BQ8NI32 183 aa11.53□□□□□ -0.56
SNRNP200-202ENST00000429650 FGFBP3Q8TAT2 258 aa11.53□□□□□ -0.56
SNRNP200-202ENST00000429650 KCNE4Q8WWG9 221 aa11.53□□□□□ -0.56
SNRNP200-202ENST00000429650 SGCZQ96LD1 299 aa11.53□□□□□ -0.56
SNRNP200-202ENST00000429650 FOXB1Q99853 325 aa11.53□□□□□ -0.56
SNRNP200-202ENST00000429650 NSG2Q9Y328 171 aa11.53□□□□□ -0.56
SNRNP200-202ENST00000429650 FAM157AC9JC47 383 aa11.53□□□□□ -0.56
SNRNP200-202ENST00000429650 CXCL13O43927 109 aa11.53□□□□□ -0.56
SNRNP200-202ENST00000429650 OR8U9P0C7N5 309 aa11.53□□□□□ -0.56
SNRNP200-202ENST00000429650 FOLR3P41439 243 aa11.53□□□□□ -0.56
SNRNP200-202ENST00000429650 RGS19P49795 217 aa11.53□□□□□ -0.56
SNRNP200-202ENST00000429650 ZNF92Q03936 586 aa11.53□□□□□ -0.56
SNRNP200-202ENST00000429650 ZFP36L1Q07352 338 aaKnown RBP11.53□□□□□ -0.56
SNRNP200-202ENST00000429650 PDZK1IP1Q13113 114 aa11.53□□□□□ -0.56
SNRNP200-202ENST00000429650 TRA2AQ13595 282 aaKnown RBP eCLIP11.53□□□□□ -0.56
SNRNP200-202ENST00000429650 CLEC9AQ6UXN8 241 aa11.53□□□□□ -0.56
SNRNP200-202ENST00000429650 LRTM2Q8N967 370 aa11.53□□□□□ -0.56
SNRNP200-202ENST00000429650 OR8U1Q8NH10 309 aa11.53□□□□□ -0.56
SNRNP200-202ENST00000429650 BSCL2Q96G97 398 aaPredicted RBP11.53□□□□□ -0.56
SNRNP200-202ENST00000429650 SUCNR1Q9BXA5 334 aa11.53□□□□□ -0.56
SNRNP200-202ENST00000429650 OR2H1Q9GZK4 316 aa11.53□□□□□ -0.56
SNRNP200-202ENST00000429650 SLC2A9Q9NRM0 540 aa11.53□□□□□ -0.56
SNRNP200-202ENST00000429650 IL36GQ9NZH8 169 aa11.53□□□□□ -0.56
SNRNP200-202ENST00000429650 ZNF391Q9UJN7 358 aa11.53□□□□□ -0.56
SNRNP200-202ENST00000429650 ST3GAL6Q9Y274 331 aa11.53□□□□□ -0.56
SNRNP200-202ENST00000429650 TIMM10BQ9Y5J6 103 aa11.53□□□□□ -0.56
SNRNP200-202ENST00000429650 POMT1Q9Y6A1 747 aa11.53□□□□□ -0.56
SNRNP200-202ENST00000429650 CCDC85CA6NKD9 419 aa11.52□□□□□ -0.57
SNRNP200-202ENST00000429650 H7C1Q1 480 aa11.52□□□□□ -0.57
SNRNP200-202ENST00000429650 P04436 131 aa11.52□□□□□ -0.57
SNRNP200-202ENST00000429650 S100A9P06702 114 aaKnown RBP11.52□□□□□ -0.57
SNRNP200-202ENST00000429650 EDN3P14138 238 aa11.52□□□□□ -0.57
SNRNP200-202ENST00000429650 FUT6P51993 359 aa11.52□□□□□ -0.57
SNRNP200-202ENST00000429650 CEACAM16Q2WEN9 425 aa11.52□□□□□ -0.57
SNRNP200-202ENST00000429650 ABLIM2Q6H8Q1 611 aa11.52□□□□□ -0.57
SNRNP200-202ENST00000429650 LIAT1Q6ZQX7 453 aa11.52□□□□□ -0.57
SNRNP200-202ENST00000429650 C18orf12Q96KH6 178 aa11.52□□□□□ -0.57
SNRNP200-202ENST00000429650 ARV1Q9H2C2 271 aa11.52□□□□□ -0.57
SNRNP200-202ENST00000429650 RGCCQ9H4X1 137 aa11.52□□□□□ -0.57
SNRNP200-202ENST00000429650 ZNF286AQ9HBT8 521 aa11.52□□□□□ -0.57
SNRNP200-202ENST00000429650 DIRAS3O95661 229 aa11.52□□□□□ -0.57
SNRNP200-202ENST00000429650 RFPL3SP0C7P2 107 aa11.52□□□□□ -0.57
SNRNP200-202ENST00000429650 DVL1P1P54792 670 aaPredicted RBP11.52□□□□□ -0.57
SNRNP200-202ENST00000429650 ZNF528Q3MIS6 628 aa11.52□□□□□ -0.57
SNRNP200-202ENST00000429650 Q6ZPA2 131 aa11.52□□□□□ -0.57
SNRNP200-202ENST00000429650 OR5L1Q8NGL2 311 aa11.52□□□□□ -0.57
SNRNP200-202ENST00000429650 MSI2Q96DH6 328 aaKnown RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms