RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 CD36P16671 472 aa12.1□□□□□ -0.47
SGCE-204ENST00000428696 SERPINA2P20848 420 aa12.1□□□□□ -0.47
SGCE-204ENST00000428696 CPT2P23786 658 aa12.1□□□□□ -0.47
SGCE-204ENST00000428696 NPY4RP50391 375 aa12.1□□□□□ -0.47
SGCE-204ENST00000428696 GP2P55259 537 aaKnown RBP12.1□□□□□ -0.47
SGCE-204ENST00000428696 GLT8D1Q68CQ7 371 aa12.1□□□□□ -0.47
SGCE-204ENST00000428696 AWAT2Q6E213 333 aa12.1□□□□□ -0.47
SGCE-204ENST00000428696 GLIPR1L1Q6UWM5 242 aa12.1□□□□□ -0.47
SGCE-204ENST00000428696 BTNL3Q6UXE8 466 aa12.1□□□□□ -0.47
SGCE-204ENST00000428696 NUDT16L1Q9BRJ7 211 aaKnown RBP12.1□□□□□ -0.47
SGCE-204ENST00000428696 BEX2Q9BXY8 128 aa12.1□□□□□ -0.47
SGCE-204ENST00000428696 SHARPINQ9H0F6 387 aa12.1□□□□□ -0.47
SGCE-204ENST00000428696 DNTTIP1Q9H147 329 aa12.1□□□□□ -0.47
SGCE-204ENST00000428696 ZNF696Q9H7X3 374 aa12.1□□□□□ -0.47
SGCE-204ENST00000428696 PLGRKTQ9HBL7 147 aa12.1□□□□□ -0.47
SGCE-204ENST00000428696 HES4Q9HCC6 221 aa12.1□□□□□ -0.47
SGCE-204ENST00000428696 ING3Q9NXR8 418 aa12.1□□□□□ -0.47
SGCE-204ENST00000428696 KAAG1Q9UBP8 84 aa12.1□□□□□ -0.47
SGCE-204ENST00000428696 AK6Q9Y3D8 172 aaKnown RBP12.1□□□□□ -0.47
SGCE-204ENST00000428696 A0A1W2PQ09 198 aa12.09□□□□□ -0.47
SGCE-204ENST00000428696 KIAA1324LA8MWY0 1029 aaPredicted RBP12.09□□□□□ -0.47
SGCE-204ENST00000428696 DEGS1O15121 323 aa12.09□□□□□ -0.47
SGCE-204ENST00000428696 SIGLEC5O15389 551 aa12.09□□□□□ -0.47
SGCE-204ENST00000428696 KDM4BO94953 1096 aa12.09□□□□□ -0.47
SGCE-204ENST00000428696 CHRM2P08172 466 aa12.09□□□□□ -0.47
SGCE-204ENST00000428696 ZNF44P15621 663 aa12.09□□□□□ -0.47
SGCE-204ENST00000428696 HNF1AP20823 631 aa12.09□□□□□ -0.47
SGCE-204ENST00000428696 MYL9P24844 172 aa12.09□□□□□ -0.47
SGCE-204ENST00000428696 SRP14P37108 136 aaKnown RBP12.09□□□□□ -0.47
SGCE-204ENST00000428696 FAM120AOSQ5T036 256 aa12.09□□□□□ -0.47
SGCE-204ENST00000428696 SYT6Q5T7P8 510 aaPredicted RBP12.09□□□□□ -0.47
SGCE-204ENST00000428696 CRIP3Q6Q6R5 217 aa12.09□□□□□ -0.47
SGCE-204ENST00000428696 LRRTM1Q86UE6 522 aa12.09□□□□□ -0.47
SGCE-204ENST00000428696 ZNF561Q8N587 486 aa12.09□□□□□ -0.47
SGCE-204ENST00000428696 NKAIN3Q8N8D7 197 aa12.09□□□□□ -0.47
SGCE-204ENST00000428696 OR4M1Q8NGD0 313 aa12.09□□□□□ -0.47
SGCE-204ENST00000428696 RAB40AQ8WXH6 277 aa12.09□□□□□ -0.47
SGCE-204ENST00000428696 PHYHIPQ92561 330 aa12.09□□□□□ -0.47
SGCE-204ENST00000428696 CHCHD6Q9BRQ6 235 aa12.09□□□□□ -0.47
SGCE-204ENST00000428696 CHST6Q9GZX3 395 aa12.09□□□□□ -0.47
SGCE-204ENST00000428696 OR51E2Q9H255 320 aa12.09□□□□□ -0.47
SGCE-204ENST00000428696 PCDHB16Q9NRJ7 776 aa12.09□□□□□ -0.47
SGCE-204ENST00000428696 MAB21L2Q9Y586 359 aa12.09□□□□□ -0.47
SGCE-204ENST00000428696 HIVEP2P31629 2446 aa12.09□□□□□ -0.47
SGCE-204ENST00000428696 TRDV1A0A1B0GX56 115 aa12.08□□□□□ -0.48
SGCE-204ENST00000428696 HSPB6O14558 160 aa12.08□□□□□ -0.48
SGCE-204ENST00000428696 SC5DO75845 299 aa12.08□□□□□ -0.48
SGCE-204ENST00000428696 ADRA2CP18825 462 aa12.08□□□□□ -0.48
SGCE-204ENST00000428696 EDDM3AQ14507 147 aa12.08□□□□□ -0.48
SGCE-204ENST00000428696 METAP1DQ6UB28 335 aaPredicted RBP12.08□□□□□ -0.48
SGCE-204ENST00000428696 PXT1Q8NFP0 134 aa12.08□□□□□ -0.48
SGCE-204ENST00000428696 OR4D6Q8NGJ1 314 aa12.08□□□□□ -0.48
SGCE-204ENST00000428696 FOXRED1Q96CU9 486 aaPredicted RBP12.08□□□□□ -0.48
SGCE-204ENST00000428696 SDSLQ96GA7 329 aa12.08□□□□□ -0.48
SGCE-204ENST00000428696 MRI1Q9BV20 369 aa12.08□□□□□ -0.48
SGCE-204ENST00000428696 ONECUT1Q9UBC0 465 aa12.08□□□□□ -0.48
SGCE-204ENST00000428696 ZNF222Q9UK12 451 aa12.08□□□□□ -0.48
SGCE-204ENST00000428696 STUB1Q9UNE7 303 aa12.08□□□□□ -0.48
SGCE-204ENST00000428696 MEX3AA1L020 520 aaKnown RBP12.07□□□□□ -0.48
SGCE-204ENST00000428696 SMIM30A4D0T7 59 aa12.07□□□□□ -0.48
SGCE-204ENST00000428696 C22orf46C9J442 243 aa12.07□□□□□ -0.48
SGCE-204ENST00000428696 ENSAO43768 121 aaKnown RBP12.07□□□□□ -0.48
SGCE-204ENST00000428696 CRTAPO75718 401 aaPredicted RBP12.07□□□□□ -0.48
SGCE-204ENST00000428696 ECDO95905 644 aaPredicted RBP12.07□□□□□ -0.48
SGCE-204ENST00000428696 GADD45AP24522 165 aa12.07□□□□□ -0.48
SGCE-204ENST00000428696 MTNR1BP49286 362 aa12.07□□□□□ -0.48
SGCE-204ENST00000428696 EDDM3BP56851 147 aa12.07□□□□□ -0.48
SGCE-204ENST00000428696 FGF12P61328 243 aa12.07□□□□□ -0.48
SGCE-204ENST00000428696 ARF6P62330 175 aa12.07□□□□□ -0.48
SGCE-204ENST00000428696 P2RY14Q15391 338 aa12.07□□□□□ -0.48
SGCE-204ENST00000428696 PIGYQ3MUY2 71 aa12.07□□□□□ -0.48
SGCE-204ENST00000428696 GDPD3Q7L5L3 318 aa12.07□□□□□ -0.48
SGCE-204ENST00000428696 FAM185AQ8N0U4 392 aa12.07□□□□□ -0.48
SGCE-204ENST00000428696 OSR2Q8N2R0 312 aa12.07□□□□□ -0.48
SGCE-204ENST00000428696 FAM46BQ96A09 425 aa12.07□□□□□ -0.48
SGCE-204ENST00000428696 BANF2Q9H503 90 aa12.07□□□□□ -0.48
SGCE-204ENST00000428696 RHOFQ9HBH0 211 aa12.07□□□□□ -0.48
SGCE-204ENST00000428696 AUP1Q9Y679 476 aa12.07□□□□□ -0.48
SGCE-204ENST00000428696 ARHGAP32A7KAX9 2087 aa12.06□□□□□ -0.48
SGCE-204ENST00000428696 PPIAL4CA0A0B4J2A2 164 aa12.06□□□□□ -0.48
SGCE-204ENST00000428696 IGHV2-70DA0A0C4DH43 119 aa12.06□□□□□ -0.48
SGCE-204ENST00000428696 KIR2DS1A0A191URI9 304 aa12.06□□□□□ -0.48
SGCE-204ENST00000428696 A0A1W2PP11 408 aa12.06□□□□□ -0.48
SGCE-204ENST00000428696 PDCD5O14737 125 aa12.06□□□□□ -0.48
SGCE-204ENST00000428696 FCN3O75636 299 aa12.06□□□□□ -0.48
SGCE-204ENST00000428696 OR2H2O95918 312 aa12.06□□□□□ -0.48
SGCE-204ENST00000428696 TK1P04183 234 aa12.06□□□□□ -0.48
SGCE-204ENST00000428696 PPIAL4GP0DN37 164 aa12.06□□□□□ -0.48
SGCE-204ENST00000428696 GTF2F2P13984 249 aa12.06□□□□□ -0.48
SGCE-204ENST00000428696 GATA3P23771 443 aa12.06□□□□□ -0.48
SGCE-204ENST00000428696 BMXP51813 675 aa12.06□□□□□ -0.48
SGCE-204ENST00000428696 GPR176Q14439 515 aa12.06□□□□□ -0.48
SGCE-204ENST00000428696 GRK1Q15835 563 aa12.06□□□□□ -0.48
SGCE-204ENST00000428696 CHRFAM7AQ494W8 412 aa12.06□□□□□ -0.48
SGCE-204ENST00000428696 SPIN3Q5JUX0 258 aa12.06□□□□□ -0.48
SGCE-204ENST00000428696 CDH26Q8IXH8 852 aa12.06□□□□□ -0.48
SGCE-204ENST00000428696 UQCC2Q9BRT2 126 aa12.06□□□□□ -0.48
SGCE-204ENST00000428696 PCGF1Q9BSM1 259 aa12.06□□□□□ -0.48
SGCE-204ENST00000428696 SELENOIQ9C0D9 397 aa12.06□□□□□ -0.48
SGCE-204ENST00000428696 TXNL4BQ9NX01 149 aaKnown RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms