RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 DEFB121Q5J5C9 76 aa13.24□□□□□ -0.29
VARS-216ENST00000428445 VAX1Q5SQQ9 334 aa13.24□□□□□ -0.29
VARS-216ENST00000428445 AADACL4Q5VUY2 407 aa13.24□□□□□ -0.29
VARS-216ENST00000428445 CENPVQ7Z7K6 275 aaPredicted RBP13.24□□□□□ -0.29
VARS-216ENST00000428445 EGFL6Q8IUX8 553 aa13.24□□□□□ -0.29
VARS-216ENST00000428445 OR8H2Q8N162 312 aa13.24□□□□□ -0.29
VARS-216ENST00000428445 C10orf35Q96D05 121 aa13.24□□□□□ -0.29
VARS-216ENST00000428445 CEP19Q96LK0 163 aa13.24□□□□□ -0.29
VARS-216ENST00000428445 ADGRL4Q9HBW9 690 aa13.24□□□□□ -0.29
VARS-216ENST00000428445 ENOPH1Q9UHY7 261 aa13.24□□□□□ -0.29
VARS-216ENST00000428445 SLC7A11Q9UPY5 501 aa13.24□□□□□ -0.29
VARS-216ENST00000428445 TCRBV4S1A1TA0A5B7 111 aa13.23□□□□□ -0.29
VARS-216ENST00000428445 FAM90A22PA8MWA6 464 aa13.23□□□□□ -0.29
VARS-216ENST00000428445 PSPNO60542 156 aa13.23□□□□□ -0.29
VARS-216ENST00000428445 APOL3O95236 402 aa13.23□□□□□ -0.29
VARS-216ENST00000428445 LPLP06858 475 aa13.23□□□□□ -0.29
VARS-216ENST00000428445 PF4V1P10720 104 aa13.23□□□□□ -0.29
VARS-216ENST00000428445 NPBWR2P48146 333 aa13.23□□□□□ -0.29
VARS-216ENST00000428445 DYNLT3P51808 116 aa13.23□□□□□ -0.29
VARS-216ENST00000428445 FUT6P51993 359 aa13.23□□□□□ -0.29
VARS-216ENST00000428445 MEF2CQ06413 473 aaPredicted RBP13.23□□□□□ -0.29
VARS-216ENST00000428445 SLC25A26Q70HW3 274 aa13.23□□□□□ -0.29
VARS-216ENST00000428445 GID4Q8IVV7 300 aa13.23□□□□□ -0.29
VARS-216ENST00000428445 TCEANCQ8N8B7 351 aa13.23□□□□□ -0.29
VARS-216ENST00000428445 TMEM163Q8TC26 289 aa13.23□□□□□ -0.29
VARS-216ENST00000428445 BCAS4Q8TDM0 211 aa13.23□□□□□ -0.29
VARS-216ENST00000428445 SNX22Q96L94 193 aa13.23□□□□□ -0.29
VARS-216ENST00000428445 POMPQ9Y244 141 aa13.23□□□□□ -0.29
VARS-216ENST00000428445 SESN1Q9Y6P5 492 aa13.23□□□□□ -0.29
VARS-216ENST00000428445 HAND1O96004 215 aa13.22□□□□□ -0.29
VARS-216ENST00000428445 SERPINA3P01011 423 aa13.22□□□□□ -0.29
VARS-216ENST00000428445 GABRR1P24046 479 aa13.22□□□□□ -0.29
VARS-216ENST00000428445 HOXD3P31249 432 aaPredicted RBP13.22□□□□□ -0.29
VARS-216ENST00000428445 GRK1Q15835 563 aa13.22□□□□□ -0.29
VARS-216ENST00000428445 ABCA11PQ4W5N1 156 aa13.22□□□□□ -0.29
VARS-216ENST00000428445 UTF1Q5T230 341 aa13.22□□□□□ -0.29
VARS-216ENST00000428445 PRAMEF5Q5TYX0 476 aa13.22□□□□□ -0.29
VARS-216ENST00000428445 SLX4IPQ5VYV7 408 aa13.22□□□□□ -0.29
VARS-216ENST00000428445 RDH10Q8IZV5 341 aa13.22□□□□□ -0.29
VARS-216ENST00000428445 YIPF7Q8N8F6 280 aa13.22□□□□□ -0.29
VARS-216ENST00000428445 OR4P4Q8NGL7 312 aa13.22□□□□□ -0.29
VARS-216ENST00000428445 EMG1Q92979 244 aaKnown RBP13.22□□□□□ -0.29
VARS-216ENST00000428445 MYDGFQ969H8 173 aa13.22□□□□□ -0.29
VARS-216ENST00000428445 UTP4Q969X6 686 aaKnown RBP13.22□□□□□ -0.29
VARS-216ENST00000428445 IL4I1Q96RQ9 567 aa13.22□□□□□ -0.29
VARS-216ENST00000428445 TMEM133Q9H2Q1 129 aa13.22□□□□□ -0.29
VARS-216ENST00000428445 RBFOX1Q9NWB1 397 aaKnown RBP13.22□□□□□ -0.29
VARS-216ENST00000428445 hADV38S2A0JD32 116 aa13.21□□□□□ -0.29
VARS-216ENST00000428445 SULT1C4O75897 302 aa13.21□□□□□ -0.29
VARS-216ENST00000428445 PF4P02776 101 aa13.21□□□□□ -0.29
VARS-216ENST00000428445 OR2T7P0C7T2 308 aa13.21□□□□□ -0.29
VARS-216ENST00000428445 BCL3P20749 454 aa13.21□□□□□ -0.29
VARS-216ENST00000428445 GDNFP39905 211 aa13.21□□□□□ -0.29
VARS-216ENST00000428445 MINOS1Q5TGZ0 78 aa13.21□□□□□ -0.29
VARS-216ENST00000428445 RNF144BQ7Z419 303 aa13.21□□□□□ -0.29
VARS-216ENST00000428445 Q8IYB0 196 aa13.21□□□□□ -0.29
VARS-216ENST00000428445 ENTHD1Q8IYW4 607 aa13.21□□□□□ -0.29
VARS-216ENST00000428445 STMN2Q93045 179 aa13.21□□□□□ -0.29
VARS-216ENST00000428445 CLEC7AQ9BXN2 247 aa13.21□□□□□ -0.29
VARS-216ENST00000428445 INPP5EQ9NRR6 644 aa13.21□□□□□ -0.29
VARS-216ENST00000428445 WARS2Q9UGM6 360 aaKnown RBP13.21□□□□□ -0.29
VARS-216ENST00000428445 MINOS1-NBL1R4GNA1 71 aa13.21□□□□□ -0.29
VARS-216ENST00000428445 ZAR1LA6NP61 321 aa13.2□□□□□ -0.3
VARS-216ENST00000428445 SYT7O43581 403 aa13.2□□□□□ -0.3
VARS-216ENST00000428445 GATBO75879 557 aaKnown RBP13.2□□□□□ -0.3
VARS-216ENST00000428445 DNAJC8O75937 253 aaPredicted RBP13.2□□□□□ -0.3
VARS-216ENST00000428445 AMY1AP04745 511 aa13.2□□□□□ -0.3
VARS-216ENST00000428445 AMY2AP04746 511 aa13.2□□□□□ -0.3
VARS-216ENST00000428445 KRT8P05787 483 aa13.2□□□□□ -0.3
VARS-216ENST00000428445 HTR1DP28221 377 aa13.2□□□□□ -0.3
VARS-216ENST00000428445 PEX2P28328 305 aa13.2□□□□□ -0.3
VARS-216ENST00000428445 TMED1Q13445 227 aa13.2□□□□□ -0.3
VARS-216ENST00000428445 KHDC1LQ5JSQ8 128 aa13.2□□□□□ -0.3
VARS-216ENST00000428445 C12orf73Q69YU5 71 aa13.2□□□□□ -0.3
VARS-216ENST00000428445 ZBTB49Q6ZSB9 765 aa13.2□□□□□ -0.3
VARS-216ENST00000428445 TRAPPC6BQ86SZ2 158 aa13.2□□□□□ -0.3
VARS-216ENST00000428445 CATSPERDQ86XM0 798 aa13.2□□□□□ -0.3
VARS-216ENST00000428445 ABHD12Q8N2K0 398 aa13.2□□□□□ -0.3
VARS-216ENST00000428445 ADI1Q9BV57 179 aa13.2□□□□□ -0.3
VARS-216ENST00000428445 PLEKHA1Q9HB21 404 aa13.2□□□□□ -0.3
VARS-216ENST00000428445 KRT84Q9NSB2 600 aa13.2□□□□□ -0.3
VARS-216ENST00000428445 LINC00312Q9Y6C7 94 aa13.2□□□□□ -0.3
VARS-216ENST00000428445 A0A1W2PQL4 384 aaPredicted RBP13.19□□□□□ -0.3
VARS-216ENST00000428445 METTL15A6NJ78 407 aa13.19□□□□□ -0.3
VARS-216ENST00000428445 G3V2T6 193 aa13.19□□□□□ -0.3
VARS-216ENST00000428445 SIRPB1O00241 398 aa13.19□□□□□ -0.3
VARS-216ENST00000428445 OR3A1P47881 315 aa13.19□□□□□ -0.3
VARS-216ENST00000428445 POU3F4P49335 361 aa13.19□□□□□ -0.3
VARS-216ENST00000428445 ZNF91Q05481 1191 aa13.19□□□□□ -0.3
VARS-216ENST00000428445 C9orf152Q5JTZ5 239 aa13.19□□□□□ -0.3
VARS-216ENST00000428445 KDM4DQ6B0I6 523 aa13.19□□□□□ -0.3
VARS-216ENST00000428445 ZDHHC13Q8IUH4 622 aa13.19□□□□□ -0.3
VARS-216ENST00000428445 PRSS35Q8N3Z0 413 aa13.19□□□□□ -0.3
VARS-216ENST00000428445 DNAAF1Q8NEP3 725 aa13.19□□□□□ -0.3
VARS-216ENST00000428445 PP6455Q8WZ26 134 aa13.19□□□□□ -0.3
VARS-216ENST00000428445 RFT1Q96AA3 541 aa13.19□□□□□ -0.3
VARS-216ENST00000428445 SLC7A6OSQ96CW6 309 aaPredicted RBP13.19□□□□□ -0.3
VARS-216ENST00000428445 BORCS8Q96FH0 119 aa13.19□□□□□ -0.3
VARS-216ENST00000428445 SLC25A33Q9BSK2 321 aa13.19□□□□□ -0.3
VARS-216ENST00000428445 ING3Q9NXR8 418 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms