RNA–Protein interactions for RNA: ENST00000427110.6

PTPRC-208, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-208ENST00000427110 C4orf22Q6V702 233 aa1.38□□□□□ -2.19
PTPRC-208ENST00000427110 CCDC121Q6ZUS5 278 aa1.38□□□□□ -2.19
PTPRC-208ENST00000427110 MDP1Q86V88 176 aa1.38□□□□□ -2.19
PTPRC-208ENST00000427110 ERO1BQ86YB8 467 aa1.38□□□□□ -2.19
PTPRC-208ENST00000427110 APRG1Q8IVJ8 170 aa1.38□□□□□ -2.19
PTPRC-208ENST00000427110 LRRC34Q8IZ02 419 aa1.38□□□□□ -2.19
PTPRC-208ENST00000427110 INO80EQ8NBZ0 244 aaPredicted RBP1.38□□□□□ -2.19
PTPRC-208ENST00000427110 TMEM35BQ8NCS4 154 aa1.38□□□□□ -2.19
PTPRC-208ENST00000427110 C19orf18Q8NEA5 215 aa1.38□□□□□ -2.19
PTPRC-208ENST00000427110 OR5B17Q8NGF7 314 aa1.38□□□□□ -2.19
PTPRC-208ENST00000427110 OR51F2Q8NH61 342 aa1.38□□□□□ -2.19
PTPRC-208ENST00000427110 CIRBP-AS1Q8TBR5 109 aa1.38□□□□□ -2.19
PTPRC-208ENST00000427110 GPX8Q8TED1 209 aa1.38□□□□□ -2.19
PTPRC-208ENST00000427110 GHSRQ92847 366 aa1.38□□□□□ -2.19
PTPRC-208ENST00000427110 CDS1Q92903 461 aa1.38□□□□□ -2.19
PTPRC-208ENST00000427110 CCDC127Q96BQ5 260 aa1.38□□□□□ -2.19
PTPRC-208ENST00000427110 RMI2Q96E14 147 aa1.38□□□□□ -2.19
PTPRC-208ENST00000427110 C9orf72Q96LT7 481 aa1.38□□□□□ -2.19
PTPRC-208ENST00000427110 GPR21Q99679 349 aa1.38□□□□□ -2.19
PTPRC-208ENST00000427110 CTRCQ99895 268 aa1.38□□□□□ -2.19
PTPRC-208ENST00000427110 NSRP1Q9H0G5 558 aaKnown RBP1.38□□□□□ -2.19
PTPRC-208ENST00000427110 ASB7Q9H672 318 aa1.38□□□□□ -2.19
PTPRC-208ENST00000427110 CYP3A43Q9HB55 503 aa1.38□□□□□ -2.19
PTPRC-208ENST00000427110 EXOSC4Q9NPD3 245 aaKnown RBP1.38□□□□□ -2.19
PTPRC-208ENST00000427110 C8orf17Q9NRJ1 99 aa1.38□□□□□ -2.19
PTPRC-208ENST00000427110 CISHQ9NSE2 258 aa1.38□□□□□ -2.19
PTPRC-208ENST00000427110 C21orf62Q9NYP8 219 aa1.38□□□□□ -2.19
PTPRC-208ENST00000427110 RPL26L1Q9UNX3 145 aaKnown RBP1.38□□□□□ -2.19
PTPRC-208ENST00000427110 NYNRINQ9P2P1 1898 aaKnown RBP1.37□□□□□ -2.19
PTPRC-208ENST00000427110 MICAL3Q7RTP6 2002 aa1.37□□□□□ -2.19
PTPRC-208ENST00000427110 VWA8A3KMH1 1905 aa1.37□□□□□ -2.19
PTPRC-208ENST00000427110 LRP4O75096 1905 aa1.37□□□□□ -2.19
PTPRC-208ENST00000427110 ANAPC1Q9H1A4 1944 aa1.37□□□□□ -2.19
PTPRC-208ENST00000427110 IGKV1D-17A0A075B6S4 117 aa1.37□□□□□ -2.19
PTPRC-208ENST00000427110 IGHV3-49A0A0A0MS15 119 aa1.37□□□□□ -2.19
PTPRC-208ENST00000427110 IGHV7-4-1A0A0J9YVY3 117 aa1.37□□□□□ -2.19
PTPRC-208ENST00000427110 F8VP50 259 aa1.37□□□□□ -2.19
PTPRC-208ENST00000427110 RPL36A-HNRNPH2H7BZ11 118 aa1.37□□□□□ -2.19
PTPRC-208ENST00000427110 APOC4-APOC2K7ER74 178 aa1.37□□□□□ -2.19
PTPRC-208ENST00000427110 TRDMT1O14717 391 aaKnown RBP1.37□□□□□ -2.19
PTPRC-208ENST00000427110 SIVA1O15304 175 aa1.37□□□□□ -2.19
PTPRC-208ENST00000427110 CST8O60676 142 aa1.37□□□□□ -2.19
PTPRC-208ENST00000427110 EDF1O60869 148 aaKnown RBP1.37□□□□□ -2.19
PTPRC-208ENST00000427110 MPDU1O75352 247 aa1.37□□□□□ -2.19
PTPRC-208ENST00000427110 ZNF189O75820 626 aaPredicted RBP1.37□□□□□ -2.19
PTPRC-208ENST00000427110 GATBO75879 557 aaKnown RBP1.37□□□□□ -2.19
PTPRC-208ENST00000427110 ATP5HO75947 161 aa1.37□□□□□ -2.19
PTPRC-208ENST00000427110 CDRT1O95170 752 aa1.37□□□□□ -2.19
PTPRC-208ENST00000427110 SCELO95171 688 aa1.37□□□□□ -2.19
PTPRC-208ENST00000427110 CYB5R3P00387 301 aaPredicted RBP1.37□□□□□ -2.19
PTPRC-208ENST00000427110 IGKV1-17P01599 117 aa1.37□□□□□ -2.19
PTPRC-208ENST00000427110 IGLV3-19P01714 112 aa1.37□□□□□ -2.19
PTPRC-208ENST00000427110 IGLV3-25P01717 112 aa1.37□□□□□ -2.19
PTPRC-208ENST00000427110 TNNC2P02585 160 aa1.37□□□□□ -2.19
PTPRC-208ENST00000427110 APOC2P02655 101 aa1.37□□□□□ -2.19
PTPRC-208ENST00000427110 C1QAP02745 245 aa1.37□□□□□ -2.19
PTPRC-208ENST00000427110 MT-ND4P03905 459 aa1.37□□□□□ -2.19
PTPRC-208ENST00000427110 ASGR1P07306 291 aa1.37□□□□□ -2.19
PTPRC-208ENST00000427110 MLNP12872 115 aa1.37□□□□□ -2.19
PTPRC-208ENST00000427110 TAC1P20366 129 aa1.37□□□□□ -2.19
PTPRC-208ENST00000427110 CD82P27701 267 aa1.37□□□□□ -2.19
PTPRC-208ENST00000427110 PHBP35232 272 aa1.37□□□□□ -2.19
PTPRC-208ENST00000427110 RPL22P35268 128 aaKnown RBP1.37□□□□□ -2.19
PTPRC-208ENST00000427110 MAGEA3P43357 314 aa1.37□□□□□ -2.19
PTPRC-208ENST00000427110 MYL6P60660 151 aa1.37□□□□□ -2.19
PTPRC-208ENST00000427110 NCALDP61601 193 aa1.37□□□□□ -2.19
PTPRC-208ENST00000427110 ELF3P78545 371 aaPredicted RBP1.37□□□□□ -2.19
PTPRC-208ENST00000427110 SIGLEC14Q08ET2 396 aa1.37□□□□□ -2.19
PTPRC-208ENST00000427110 LAMTOR4Q0VGL1 99 aa1.37□□□□□ -2.19
PTPRC-208ENST00000427110 PDK2Q15119 407 aa1.37□□□□□ -2.19
PTPRC-208ENST00000427110 ZBTB6Q15916 424 aa1.37□□□□□ -2.19
PTPRC-208ENST00000427110 HADHQ16836 314 aaKnown RBP1.37□□□□□ -2.19
PTPRC-208ENST00000427110 RNASE13Q5GAN3 156 aaKnown RBP1.37□□□□□ -2.19
PTPRC-208ENST00000427110 TEX30Q5JUR7 227 aa1.37□□□□□ -2.19
PTPRC-208ENST00000427110 MLIPQ5VWP3 458 aa1.37□□□□□ -2.19
PTPRC-208ENST00000427110 OR2T5Q6IEZ7 315 aa1.37□□□□□ -2.19
PTPRC-208ENST00000427110 DCUN1D2Q6PH85 259 aa1.37□□□□□ -2.19
PTPRC-208ENST00000427110 OPN5Q6U736 354 aa1.37□□□□□ -2.19
PTPRC-208ENST00000427110 ALKAL1Q6UXT8 129 aa1.37□□□□□ -2.19
PTPRC-208ENST00000427110 TMPRSS11AQ6ZMR5 421 aa1.37□□□□□ -2.19
PTPRC-208ENST00000427110 USP50Q70EL3 339 aaPredicted RBP1.37□□□□□ -2.19
PTPRC-208ENST00000427110 TMCO2Q7Z6W1 182 aaPredicted RBP1.37□□□□□ -2.19
PTPRC-208ENST00000427110 DEFB132Q7Z7B7 95 aa1.37□□□□□ -2.19
PTPRC-208ENST00000427110 ZBTB8OSQ8IWT0 167 aa1.37□□□□□ -2.19
PTPRC-208ENST00000427110 OSR2Q8N2R0 312 aa1.37□□□□□ -2.19
PTPRC-208ENST00000427110 TRAM1L1Q8N609 369 aa1.37□□□□□ -2.19
PTPRC-208ENST00000427110 C8orf31Q8N9H6 132 aa1.37□□□□□ -2.19
PTPRC-208ENST00000427110 LRRC75AQ8NAA5 344 aa1.37□□□□□ -2.19
PTPRC-208ENST00000427110 OR5AR1Q8NGP9 310 aa1.37□□□□□ -2.19
PTPRC-208ENST00000427110 OR2T29Q8NH02 315 aa1.37□□□□□ -2.19
PTPRC-208ENST00000427110 JOSD2Q8TAC2 188 aa1.37□□□□□ -2.19
PTPRC-208ENST00000427110 ACTL9Q8TC94 416 aa1.37□□□□□ -2.19
PTPRC-208ENST00000427110 RXFP4Q8TDU9 374 aa1.37□□□□□ -2.19
PTPRC-208ENST00000427110 PIH1D2Q8WWB5 315 aa1.37□□□□□ -2.19
PTPRC-208ENST00000427110 C1orf54Q8WWF1 131 aa1.37□□□□□ -2.19
PTPRC-208ENST00000427110 TMEM159Q96B96 161 aa1.37□□□□□ -2.19
PTPRC-208ENST00000427110 LRRC39Q96DD0 335 aa1.37□□□□□ -2.19
PTPRC-208ENST00000427110 ANKRD36BP1Q96IX9 119 aa1.37□□□□□ -2.19
PTPRC-208ENST00000427110 OPALINQ96PE5 141 aa1.37□□□□□ -2.19
PTPRC-208ENST00000427110 MCEEQ96PE7 176 aa1.37□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms