RNA–Protein interactions for RNA: ENST00000426538.6

GINS3-203, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-203ENST00000426538 WDR82Q6UXN9 313 aa12.79□□□□□ -0.36
GINS3-203ENST00000426538 Q6ZNX1 250 aa12.79□□□□□ -0.36
GINS3-203ENST00000426538 POC1AQ8NBT0 407 aa12.79□□□□□ -0.36
GINS3-203ENST00000426538 HS3ST6Q96QI5 342 aa12.79□□□□□ -0.36
GINS3-203ENST00000426538 NRIP2Q9BQI9 281 aa12.79□□□□□ -0.36
GINS3-203ENST00000426538 FAAP24Q9BTP7 215 aa12.79□□□□□ -0.36
GINS3-203ENST00000426538 FN3KRPQ9HA64 309 aa12.79□□□□□ -0.36
GINS3-203ENST00000426538 C1orf123Q9NWV4 160 aa12.79□□□□□ -0.36
GINS3-203ENST00000426538 ICE1Q9Y2F5 2266 aa12.79□□□□□ -0.36
GINS3-203ENST00000426538 A0A1B0GVG6 124 aa12.79□□□□□ -0.36
GINS3-203ENST00000426538 C17orf100A8MU93 164 aa12.79□□□□□ -0.36
GINS3-203ENST00000426538 B9A039 149 aa12.79□□□□□ -0.36
GINS3-203ENST00000426538 SIAH2O43255 324 aa12.79□□□□□ -0.36
GINS3-203ENST00000426538 CA11O75493 328 aa12.79□□□□□ -0.36
GINS3-203ENST00000426538 PTBP3O95758 552 aaKnown RBP12.79□□□□□ -0.36
GINS3-203ENST00000426538 IGHV1-46P01743 117 aa12.79□□□□□ -0.36
GINS3-203ENST00000426538 GLRA1P23415 457 aa12.79□□□□□ -0.36
GINS3-203ENST00000426538 DUSP1P28562 367 aa12.79□□□□□ -0.36
GINS3-203ENST00000426538 CBX5P45973 191 aa12.79□□□□□ -0.36
GINS3-203ENST00000426538 RFX2P48378 723 aa12.79□□□□□ -0.36
GINS3-203ENST00000426538 IL13RA2Q14627 380 aa12.79□□□□□ -0.36
GINS3-203ENST00000426538 ZNF672Q499Z4 452 aaPredicted RBP12.79□□□□□ -0.36
GINS3-203ENST00000426538 RTN4RL2Q86UN3 420 aa12.79□□□□□ -0.36
GINS3-203ENST00000426538 ITLN1Q8WWA0 313 aa12.79□□□□□ -0.36
GINS3-203ENST00000426538 ST8SIA4Q92187 359 aa12.79□□□□□ -0.36
GINS3-203ENST00000426538 DHRS9Q9BPW9 319 aa12.79□□□□□ -0.36
GINS3-203ENST00000426538 MS4A5Q9H3V2 200 aa12.79□□□□□ -0.36
GINS3-203ENST00000426538 SPACA1Q9HBV2 294 aa12.79□□□□□ -0.36
GINS3-203ENST00000426538 ZFYVE26Q68DK2 2539 aa12.79□□□□□ -0.36
GINS3-203ENST00000426538 NAP1L6A6NFF2 107 aa12.78□□□□□ -0.36
GINS3-203ENST00000426538 AKAIN1P0CW23 69 aa12.78□□□□□ -0.36
GINS3-203ENST00000426538 RCVRNP35243 200 aa12.78□□□□□ -0.36
GINS3-203ENST00000426538 TAS2R19P59542 299 aa12.78□□□□□ -0.36
GINS3-203ENST00000426538 TMEM229BQ8NBD8 167 aa12.78□□□□□ -0.36
GINS3-203ENST00000426538 FAM222BQ8WU58 562 aa12.78□□□□□ -0.36
GINS3-203ENST00000426538 HRASLSQ9HDD0 168 aa12.78□□□□□ -0.36
GINS3-203ENST00000426538 DYNLRB1Q9NP97 96 aa12.78□□□□□ -0.36
GINS3-203ENST00000426538 MCUBQ9NWR8 336 aa12.78□□□□□ -0.36
GINS3-203ENST00000426538 IL36RNQ9UBH0 155 aa12.78□□□□□ -0.36
GINS3-203ENST00000426538 GLS2Q9UI32 602 aa12.78□□□□□ -0.36
GINS3-203ENST00000426538 ZNF107Q9UII5 783 aaPredicted RBP12.78□□□□□ -0.36
GINS3-203ENST00000426538 ANKHD1Q8IWZ3 2542 aaKnown RBP12.78□□□□□ -0.36
GINS3-203ENST00000426538 SPTBN1Q01082 2364 aaKnown RBP12.77□□□□□ -0.36
GINS3-203ENST00000426538 ZNF736B4DX44 427 aaPredicted RBP12.77□□□□□ -0.36
GINS3-203ENST00000426538 MCRIP1C9JLW8 97 aa12.77□□□□□ -0.36
GINS3-203ENST00000426538 DEGS1O15121 323 aa12.77□□□□□ -0.36
GINS3-203ENST00000426538 SSX5O60225 188 aa12.77□□□□□ -0.36
GINS3-203ENST00000426538 ZNF44P15621 663 aa12.77□□□□□ -0.36
GINS3-203ENST00000426538 TNFRSF1AP19438 455 aa12.77□□□□□ -0.36
GINS3-203ENST00000426538 GATA4P43694 442 aa12.77□□□□□ -0.36
GINS3-203ENST00000426538 EFNB3Q15768 340 aa12.77□□□□□ -0.36
GINS3-203ENST00000426538 STEAP1BQ6NZ63 245 aa12.77□□□□□ -0.36
GINS3-203ENST00000426538 BRICD5Q6PL45 260 aa12.77□□□□□ -0.36
GINS3-203ENST00000426538 MOGAT3Q86VF5 341 aa12.77□□□□□ -0.36
GINS3-203ENST00000426538 GVQW1Q8N7I0 195 aa12.77□□□□□ -0.36
GINS3-203ENST00000426538 OR10Z1Q8NGY1 313 aa12.77□□□□□ -0.36
GINS3-203ENST00000426538 LRRC29Q8WV35 223 aa12.77□□□□□ -0.36
GINS3-203ENST00000426538 ERGIC1Q969X5 290 aa12.77□□□□□ -0.36
GINS3-203ENST00000426538 CMSS1Q9BQ75 279 aaKnown RBP12.77□□□□□ -0.36
GINS3-203ENST00000426538 SULT4A1Q9BR01 284 aa12.77□□□□□ -0.36
GINS3-203ENST00000426538 OCSTAMPQ9BR26 566 aa12.77□□□□□ -0.36
GINS3-203ENST00000426538 TMEM204Q9BSN7 226 aa12.77□□□□□ -0.36
GINS3-203ENST00000426538 EGLN1Q9GZT9 426 aa12.77□□□□□ -0.36
GINS3-203ENST00000426538 DECR2Q9NUI1 292 aa12.77□□□□□ -0.36
GINS3-203ENST00000426538 ZNF581Q9P0T4 197 aa12.77□□□□□ -0.36
GINS3-203ENST00000426538 NLKQ9UBE8 527 aa12.77□□□□□ -0.36
GINS3-203ENST00000426538 UBE2QL1A1L167 161 aa12.76□□□□□ -0.37
GINS3-203ENST00000426538 HS3ST1O14792 307 aa12.76□□□□□ -0.37
GINS3-203ENST00000426538 SH2D1BO14796 132 aa12.76□□□□□ -0.37
GINS3-203ENST00000426538 SSX4O60224 188 aa12.76□□□□□ -0.37
GINS3-203ENST00000426538 MT-ND4P03905 459 aa12.76□□□□□ -0.37
GINS3-203ENST00000426538 CD3DP04234 171 aa12.76□□□□□ -0.37
GINS3-203ENST00000426538 ADH4P08319 380 aa12.76□□□□□ -0.37
GINS3-203ENST00000426538 SPNP16150 400 aa12.76□□□□□ -0.37
GINS3-203ENST00000426538 HLA-DMAP28067 261 aa12.76□□□□□ -0.37
GINS3-203ENST00000426538 SLC6A1P30531 599 aa12.76□□□□□ -0.37
GINS3-203ENST00000426538 CFHR2P36980 270 aa12.76□□□□□ -0.37
GINS3-203ENST00000426538 PMELP40967 661 aa12.76□□□□□ -0.37
GINS3-203ENST00000426538 ZNF146Q15072 292 aa12.76□□□□□ -0.37
GINS3-203ENST00000426538 SPIN3Q5JUX0 258 aa12.76□□□□□ -0.37
GINS3-203ENST00000426538 PLET1Q6UQ28 207 aa12.76□□□□□ -0.37
GINS3-203ENST00000426538 MUC15Q8N387 334 aa12.76□□□□□ -0.37
GINS3-203ENST00000426538 DUSP18Q8NEJ0 188 aa12.76□□□□□ -0.37
GINS3-203ENST00000426538 LILRB1Q8NHL6 650 aaPredicted RBP12.76□□□□□ -0.37
GINS3-203ENST00000426538 NEK7Q8TDX7 302 aa12.76□□□□□ -0.37
GINS3-203ENST00000426538 ST6GALNAC5Q9BVH7 336 aa12.76□□□□□ -0.37
GINS3-203ENST00000426538 HES4Q9HCC6 221 aa12.76□□□□□ -0.37
GINS3-203ENST00000426538 RASL12Q9NYN1 266 aa12.76□□□□□ -0.37
GINS3-203ENST00000426538 AK3Q9UIJ7 227 aa12.76□□□□□ -0.37
GINS3-203ENST00000426538 hCG_2014768A0A024R1R8 64 aa12.76□□□□□ -0.37
GINS3-203ENST00000426538 GIFP27352 417 aa12.76□□□□□ -0.37
GINS3-203ENST00000426538 LOXP28300 417 aaPredicted RBP12.76□□□□□ -0.37
GINS3-203ENST00000426538 CCL8P80075 99 aa12.76□□□□□ -0.37
GINS3-203ENST00000426538 RBM39Q14498 530 aaKnown RBP12.76□□□□□ -0.37
GINS3-203ENST00000426538 SMIM21Q3B7S5 101 aa12.76□□□□□ -0.37
GINS3-203ENST00000426538 FAM209AQ5JX71 171 aa12.76□□□□□ -0.37
GINS3-203ENST00000426538 ACP7Q6ZNF0 438 aa12.76□□□□□ -0.37
GINS3-203ENST00000426538 OR4S1Q8NGB4 309 aa12.76□□□□□ -0.37
GINS3-203ENST00000426538 FBXW5Q969U6 566 aa12.76□□□□□ -0.37
GINS3-203ENST00000426538 CACNG6Q9BXT2 260 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms