RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 VAX1Q5SQQ9 334 aa9.88□□□□□ -0.83
SEC61A1-202ENST00000424880 LHFPL1Q86WI0 220 aa9.88□□□□□ -0.83
SEC61A1-202ENST00000424880 C9orf40Q8IXQ3 194 aa9.88□□□□□ -0.83
SEC61A1-202ENST00000424880 TMEM183AQ8IXX5 376 aa9.88□□□□□ -0.83
SEC61A1-202ENST00000424880 ZFYVE21Q9BQ24 234 aa9.88□□□□□ -0.83
SEC61A1-202ENST00000424880 OR10A5Q9H207 317 aa9.88□□□□□ -0.83
SEC61A1-202ENST00000424880 GPR173Q9NS66 373 aa9.88□□□□□ -0.83
SEC61A1-202ENST00000424880 AURKAIP1Q9NWT8 199 aaPredicted RBP9.88□□□□□ -0.83
SEC61A1-202ENST00000424880 NSG2Q9Y328 171 aa9.88□□□□□ -0.83
SEC61A1-202ENST00000424880 EDDM13A0A1B0GTR0 161 aa9.88□□□□□ -0.83
SEC61A1-202ENST00000424880 BPNT1O95861 308 aa9.88□□□□□ -0.83
SEC61A1-202ENST00000424880 APODP05090 189 aa9.88□□□□□ -0.83
SEC61A1-202ENST00000424880 HNRNPA1P09651 372 aaKnown RBP eCLIP9.88□□□□□ -0.83
SEC61A1-202ENST00000424880 FOLR1P15328 257 aa9.88□□□□□ -0.83
SEC61A1-202ENST00000424880 S100A7P31151 101 aa9.88□□□□□ -0.83
SEC61A1-202ENST00000424880 ROM1Q03395 351 aa9.88□□□□□ -0.83
SEC61A1-202ENST00000424880 MYPOPQ86VE0 399 aaPredicted RBP9.88□□□□□ -0.83
SEC61A1-202ENST00000424880 NKAIN3Q8N8D7 197 aa9.88□□□□□ -0.83
SEC61A1-202ENST00000424880 OR1P1Q8NH06 330 aa9.88□□□□□ -0.83
SEC61A1-202ENST00000424880 SYT3Q9BQG1 590 aa9.88□□□□□ -0.83
SEC61A1-202ENST00000424880 OR8D2Q9GZM6 311 aa9.88□□□□□ -0.83
SEC61A1-202ENST00000424880 PBOV1Q9GZY1 135 aa9.88□□□□□ -0.83
SEC61A1-202ENST00000424880 CALHM2Q9HA72 323 aa9.88□□□□□ -0.83
SEC61A1-202ENST00000424880 PHPT1Q9NRX4 125 aaPredicted RBP9.88□□□□□ -0.83
SEC61A1-202ENST00000424880 A0A1W2PPQ1 181 aa9.87□□□□□ -0.83
SEC61A1-202ENST00000424880 ZNF850A8MQ14 1090 aa9.87□□□□□ -0.83
SEC61A1-202ENST00000424880 SCDO00767 359 aa9.87□□□□□ -0.83
SEC61A1-202ENST00000424880 SSSCA1O60232 199 aa9.87□□□□□ -0.83
SEC61A1-202ENST00000424880 CEACAM1P13688 526 aa9.87□□□□□ -0.83
SEC61A1-202ENST00000424880 POLR2HP52434 150 aaKnown RBP9.87□□□□□ -0.83
SEC61A1-202ENST00000424880 FOXL2P58012 376 aa9.87□□□□□ -0.83
SEC61A1-202ENST00000424880 EWSR1Q01844 656 aaKnown RBP eCLIP9.87□□□□□ -0.83
SEC61A1-202ENST00000424880 SGCGQ13326 291 aa9.87□□□□□ -0.83
SEC61A1-202ENST00000424880 OR5I1Q13606 314 aa9.87□□□□□ -0.83
SEC61A1-202ENST00000424880 TMEM52BQ4KMG9 183 aa9.87□□□□□ -0.83
SEC61A1-202ENST00000424880 CST9LP1Q5W188 147 aa9.87□□□□□ -0.83
SEC61A1-202ENST00000424880 Q6ZVH6 145 aa9.87□□□□□ -0.83
SEC61A1-202ENST00000424880 OR5C1Q8NGR4 320 aa9.87□□□□□ -0.83
SEC61A1-202ENST00000424880 SVIPQ8NHG7 77 aa9.87□□□□□ -0.83
SEC61A1-202ENST00000424880 TM4SF19Q96DZ7 209 aa9.87□□□□□ -0.83
SEC61A1-202ENST00000424880 RAB11FIP5Q9BXF6 653 aa9.87□□□□□ -0.83
SEC61A1-202ENST00000424880 ZNF665Q9H7R5 613 aa9.87□□□□□ -0.83
SEC61A1-202ENST00000424880 PLEKHA2Q9HB19 425 aa9.87□□□□□ -0.83
SEC61A1-202ENST00000424880 LRFN1Q9P244 771 aa9.87□□□□□ -0.83
SEC61A1-202ENST00000424880 DEC1Q9P2X7 70 aa9.87□□□□□ -0.83
SEC61A1-202ENST00000424880 FUT9Q9Y231 359 aa9.87□□□□□ -0.83
SEC61A1-202ENST00000424880 TMEM210A6NLX4 147 aa9.87□□□□□ -0.83
SEC61A1-202ENST00000424880 ZNF705FA8MVS1 300 aaPredicted RBP9.87□□□□□ -0.83
SEC61A1-202ENST00000424880 SRSF10O75494 262 aaKnown RBP9.87□□□□□ -0.83
SEC61A1-202ENST00000424880 ZNF705DP0CH99 300 aaPredicted RBP9.87□□□□□ -0.83
SEC61A1-202ENST00000424880 ZNF705BP0CI00 300 aaPredicted RBP9.87□□□□□ -0.83
SEC61A1-202ENST00000424880 SLC35E2P0CK97 266 aa9.87□□□□□ -0.83
SEC61A1-202ENST00000424880 PNMTP11086 282 aa9.87□□□□□ -0.83
SEC61A1-202ENST00000424880 GZMHP20718 246 aa9.87□□□□□ -0.83
SEC61A1-202ENST00000424880 AKT2P31751 481 aa9.87□□□□□ -0.83
SEC61A1-202ENST00000424880 ERVFC1-1P60608 527 aa9.87□□□□□ -0.83
SEC61A1-202ENST00000424880 VAMP2P63027 116 aa9.87□□□□□ -0.83
SEC61A1-202ENST00000424880 ZNF117Q03924 483 aa9.87□□□□□ -0.83
SEC61A1-202ENST00000424880 ADIRFQ15847 76 aa9.87□□□□□ -0.83
SEC61A1-202ENST00000424880 ZNF440Q8IYI8 595 aa9.87□□□□□ -0.83
SEC61A1-202ENST00000424880 SNIP1Q8TAD8 396 aaKnown RBP9.87□□□□□ -0.83
SEC61A1-202ENST00000424880 EMG1Q92979 244 aaKnown RBP9.87□□□□□ -0.83
SEC61A1-202ENST00000424880 SDSLQ96GA7 329 aa9.87□□□□□ -0.83
SEC61A1-202ENST00000424880 NXF5Q9H1B4 397 aaKnown RBP9.87□□□□□ -0.83
SEC61A1-202ENST00000424880 FIGNL2A6NMB9 653 aa9.86□□□□□ -0.83
SEC61A1-202ENST00000424880 CEACAM18A8MTB9 384 aa9.86□□□□□ -0.83
SEC61A1-202ENST00000424880 SHISA8B8ZZ34 492 aa9.86□□□□□ -0.83
SEC61A1-202ENST00000424880 DFFBO76075 338 aa9.86□□□□□ -0.83
SEC61A1-202ENST00000424880 RPLP1P05386 114 aaKnown RBP9.86□□□□□ -0.83
SEC61A1-202ENST00000424880 FGF5P12034 268 aa9.86□□□□□ -0.83
SEC61A1-202ENST00000424880 GAB4Q2WGN9 574 aa9.86□□□□□ -0.83
SEC61A1-202ENST00000424880 RTL10Q7L3V2 364 aa9.86□□□□□ -0.83
SEC61A1-202ENST00000424880 LFNGQ8NES3 379 aa9.86□□□□□ -0.83
SEC61A1-202ENST00000424880 RTN4IP1Q8WWV3 396 aaPredicted RBP9.86□□□□□ -0.83
SEC61A1-202ENST00000424880 C1orf147Q96MC9 270 aaPredicted RBP9.86□□□□□ -0.83
SEC61A1-202ENST00000424880 NCOR1P1Q9H4R4 102 aa9.86□□□□□ -0.83
SEC61A1-202ENST00000424880 IGSF23A1L1A6 192 aa9.86□□□□□ -0.83
SEC61A1-202ENST00000424880 PHF1O43189 567 aaPredicted RBP9.86□□□□□ -0.83
SEC61A1-202ENST00000424880 ZNF10P21506 573 aaPredicted RBP9.86□□□□□ -0.83
SEC61A1-202ENST00000424880 OR3A1P47881 315 aa9.86□□□□□ -0.83
SEC61A1-202ENST00000424880 CSNK1A1P48729 337 aa9.86□□□□□ -0.83
SEC61A1-202ENST00000424880 H3F3AP84243 136 aa9.86□□□□□ -0.83
SEC61A1-202ENST00000424880 PRTGQ2VWP7 1150 aa9.86□□□□□ -0.83
SEC61A1-202ENST00000424880 ABCA11PQ4W5N1 156 aa9.86□□□□□ -0.83
SEC61A1-202ENST00000424880 COA6Q5JTJ3 125 aaKnown RBP9.86□□□□□ -0.83
SEC61A1-202ENST00000424880 ZNF774Q6NX45 483 aa9.86□□□□□ -0.83
SEC61A1-202ENST00000424880 FAM57BQ71RH2 274 aa9.86□□□□□ -0.83
SEC61A1-202ENST00000424880 ZNF573Q86YE8 665 aa9.86□□□□□ -0.83
SEC61A1-202ENST00000424880 ZPBPQ9BS86 351 aa9.86□□□□□ -0.83
SEC61A1-202ENST00000424880 PCGF1Q9BSM1 259 aa9.86□□□□□ -0.83
SEC61A1-202ENST00000424880 VSIRQ9H7M9 311 aa9.86□□□□□ -0.83
SEC61A1-202ENST00000424880 GPR84Q9NQS5 396 aa9.86□□□□□ -0.83
SEC61A1-202ENST00000424880 PNO1Q9NRX1 252 aaKnown RBP9.86□□□□□ -0.83
SEC61A1-202ENST00000424880 POLR1DQ9Y2S0 133 aa9.86□□□□□ -0.83
SEC61A1-202ENST00000424880 A0A1W2PQU0 124 aa9.86□□□□□ -0.83
SEC61A1-202ENST00000424880 E9PLN8 166 aa9.86□□□□□ -0.83
SEC61A1-202ENST00000424880 CLDN34H7C241 214 aa9.86□□□□□ -0.83
SEC61A1-202ENST00000424880 HSD11B1P28845 292 aa9.86□□□□□ -0.83
SEC61A1-202ENST00000424880 CTHP32929 405 aa9.86□□□□□ -0.83
SEC61A1-202ENST00000424880 GABREP78334 506 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms