RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 OVOL2Q9BRP0 275 aa4.81□□□□□ -1.64
SDCBP-203ENST00000424270 TMEM120AQ9BXJ8 343 aa4.81□□□□□ -1.64
SDCBP-203ENST00000424270 BARHL1Q9BZE3 327 aa4.81□□□□□ -1.64
SDCBP-203ENST00000424270 PARP11Q9NR21 331 aa4.81□□□□□ -1.64
SDCBP-203ENST00000424270 VAPAQ9P0L0 249 aa4.81□□□□□ -1.64
SDCBP-203ENST00000424270 ZNF107Q9UII5 783 aaPredicted RBP4.81□□□□□ -1.64
SDCBP-203ENST00000424270 OR5B21A6NL26 309 aa4.8□□□□□ -1.64
SDCBP-203ENST00000424270 EPM2AB3EWF7 344 aa4.8□□□□□ -1.64
SDCBP-203ENST00000424270 IGLL5B9A064 214 aa4.8□□□□□ -1.64
SDCBP-203ENST00000424270 SDHDO14521 159 aa4.8□□□□□ -1.64
SDCBP-203ENST00000424270 UBDO15205 165 aa4.8□□□□□ -1.64
SDCBP-203ENST00000424270 GSC2O15499 205 aa4.8□□□□□ -1.64
SDCBP-203ENST00000424270 IGLV1-47P01700 117 aa4.8□□□□□ -1.64
SDCBP-203ENST00000424270 IGHV3-7P01780 117 aa4.8□□□□□ -1.64
SDCBP-203ENST00000424270 SHBGP04278 402 aa4.8□□□□□ -1.64
SDCBP-203ENST00000424270 HSPB1P04792 205 aaKnown RBP4.8□□□□□ -1.64
SDCBP-203ENST00000424270 GDNFP39905 211 aa4.8□□□□□ -1.64
SDCBP-203ENST00000424270 PTGFRP43088 359 aa4.8□□□□□ -1.64
SDCBP-203ENST00000424270 GNG10P50151 68 aa4.8□□□□□ -1.64
SDCBP-203ENST00000424270 RAB7AP51149 207 aa4.8□□□□□ -1.64
SDCBP-203ENST00000424270 ZNF121P58317 390 aaPredicted RBP4.8□□□□□ -1.64
SDCBP-203ENST00000424270 ZNF45Q02386 682 aa4.8□□□□□ -1.64
SDCBP-203ENST00000424270 CFHR3Q02985 330 aa4.8□□□□□ -1.64
SDCBP-203ENST00000424270 TNFRSF9Q07011 255 aa4.8□□□□□ -1.64
SDCBP-203ENST00000424270 TRAM2Q15035 370 aa4.8□□□□□ -1.64
SDCBP-203ENST00000424270 CEACAM21Q3KPI0 293 aa4.8□□□□□ -1.64
SDCBP-203ENST00000424270 FAM76BQ5HYJ3 339 aa4.8□□□□□ -1.64
SDCBP-203ENST00000424270 TCF23Q7RTU1 214 aa4.8□□□□□ -1.64
SDCBP-203ENST00000424270 ZNF573Q86YE8 665 aa4.8□□□□□ -1.64
SDCBP-203ENST00000424270 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.8□□□□□ -1.64
SDCBP-203ENST00000424270 MSRB3Q8IXL7 192 aa4.8□□□□□ -1.64
SDCBP-203ENST00000424270 MREGQ8N565 214 aa4.8□□□□□ -1.64
SDCBP-203ENST00000424270 ZNF645Q8N7E2 425 aa4.8□□□□□ -1.64
SDCBP-203ENST00000424270 FAM86B1Q8N7N1 296 aa4.8□□□□□ -1.64
SDCBP-203ENST00000424270 OR10X1Q8NGY0 326 aa4.8□□□□□ -1.64
SDCBP-203ENST00000424270 OR2T10Q8NGZ9 312 aa4.8□□□□□ -1.64
SDCBP-203ENST00000424270 OR4K13Q8NH42 304 aa4.8□□□□□ -1.64
SDCBP-203ENST00000424270 OR9G1Q8NH87 305 aa4.8□□□□□ -1.64
SDCBP-203ENST00000424270 SVIPQ8NHG7 77 aa4.8□□□□□ -1.64
SDCBP-203ENST00000424270 CASTOR1Q8WTX7 329 aa4.8□□□□□ -1.64
SDCBP-203ENST00000424270 WDR89Q96FK6 387 aaPredicted RBP4.8□□□□□ -1.64
SDCBP-203ENST00000424270 HSH2DQ96JZ2 352 aa4.8□□□□□ -1.64
SDCBP-203ENST00000424270 HSPB9Q9BQS6 159 aa4.8□□□□□ -1.64
SDCBP-203ENST00000424270 GGTLC1Q9BX51 225 aa4.8□□□□□ -1.64
SDCBP-203ENST00000424270 TOLLIPQ9H0E2 274 aa4.8□□□□□ -1.64
SDCBP-203ENST00000424270 WFDC10AQ9H1F0 79 aa4.8□□□□□ -1.64
SDCBP-203ENST00000424270 RGCCQ9H4X1 137 aa4.8□□□□□ -1.64
SDCBP-203ENST00000424270 IKZF5Q9H5V7 419 aa4.8□□□□□ -1.64
SDCBP-203ENST00000424270 NIPAL2Q9H841 368 aa4.8□□□□□ -1.64
SDCBP-203ENST00000424270 PPCSQ9HAB8 311 aa4.8□□□□□ -1.64
SDCBP-203ENST00000424270 NRIP3Q9NQ35 241 aa4.8□□□□□ -1.64
SDCBP-203ENST00000424270 ENPP5Q9UJA9 477 aa4.8□□□□□ -1.64
SDCBP-203ENST00000424270 SLC7A11Q9UPY5 501 aa4.8□□□□□ -1.64
SDCBP-203ENST00000424270 ERGIC3Q9Y282 383 aa4.8□□□□□ -1.64
SDCBP-203ENST00000424270 TMEM5Q9Y2B1 443 aa4.8□□□□□ -1.64
SDCBP-203ENST00000424270 UBE2J1Q9Y385 318 aaPredicted RBP4.8□□□□□ -1.64
SDCBP-203ENST00000424270 FBXO7Q9Y3I1 522 aa4.8□□□□□ -1.64
SDCBP-203ENST00000424270 TRAV41A0A0B4J266 112 aa4.79□□□□□ -1.64
SDCBP-203ENST00000424270 A0A1W2PN81 502 aa4.79□□□□□ -1.64
SDCBP-203ENST00000424270 FAM90A18PA6NE21 464 aa4.79□□□□□ -1.64
SDCBP-203ENST00000424270 FAM90A16PA6NEW6 464 aa4.79□□□□□ -1.64
SDCBP-203ENST00000424270 FAM90A20PA6NIJ5 464 aa4.79□□□□□ -1.64
SDCBP-203ENST00000424270 FAM90A9PA6NNJ1 464 aa4.79□□□□□ -1.64
SDCBP-203ENST00000424270 FAM90A12PA8MX19 464 aa4.79□□□□□ -1.64
SDCBP-203ENST00000424270 FAM90A5PA8MXJ8 464 aa4.79□□□□□ -1.64
SDCBP-203ENST00000424270 G3V318 75 aa4.79□□□□□ -1.64
SDCBP-203ENST00000424270 J3QT63 122 aa4.79□□□□□ -1.64
SDCBP-203ENST00000424270 CDC42EP2O14613 210 aa4.79□□□□□ -1.64
SDCBP-203ENST00000424270 ARPC1BO15143 372 aaKnown RBP4.79□□□□□ -1.64
SDCBP-203ENST00000424270 SPRY2O43597 315 aa4.79□□□□□ -1.64
SDCBP-203ENST00000424270 IFNA14P01570 189 aa4.79□□□□□ -1.64
SDCBP-203ENST00000424270 FAM90A15PP0C7V4 464 aa4.79□□□□□ -1.64
SDCBP-203ENST00000424270 FAM90A13PP0C7W8 464 aa4.79□□□□□ -1.64
SDCBP-203ENST00000424270 FAM90A14PP0C7W9 464 aa4.79□□□□□ -1.64
SDCBP-203ENST00000424270 FAM90A24PP0C7X0 464 aa4.79□□□□□ -1.64
SDCBP-203ENST00000424270 SLC2A2P11168 524 aaPredicted RBP4.79□□□□□ -1.64
SDCBP-203ENST00000424270 GPX2P18283 190 aa4.79□□□□□ -1.64
SDCBP-203ENST00000424270 CD40LGP29965 261 aa4.79□□□□□ -1.64
SDCBP-203ENST00000424270 SLC6A6P31641 620 aa4.79□□□□□ -1.64
SDCBP-203ENST00000424270 OTX1P32242 354 aaPredicted RBP4.79□□□□□ -1.64
SDCBP-203ENST00000424270 PYCR1P32322 319 aa4.79□□□□□ -1.64
SDCBP-203ENST00000424270 BMI1P35226 326 aa4.79□□□□□ -1.64
SDCBP-203ENST00000424270 CHRNA7P36544 502 aa4.79□□□□□ -1.64
SDCBP-203ENST00000424270 REG1BP48304 166 aa4.79□□□□□ -1.64
SDCBP-203ENST00000424270 MTPNP58546 118 aa4.79□□□□□ -1.64
SDCBP-203ENST00000424270 STX3Q13277 289 aa4.79□□□□□ -1.64
SDCBP-203ENST00000424270 LTC4SQ16873 150 aa4.79□□□□□ -1.64
SDCBP-203ENST00000424270 ECSCRQ19T08 205 aa4.79□□□□□ -1.64
SDCBP-203ENST00000424270 FGD3Q5JSP0 725 aa4.79□□□□□ -1.64
SDCBP-203ENST00000424270 ZNF684Q5T5D7 378 aa4.79□□□□□ -1.64
SDCBP-203ENST00000424270 HEPN1Q6WQI6 88 aa4.79□□□□□ -1.64
SDCBP-203ENST00000424270 LINC00322Q6ZN03 302 aaPredicted RBP4.79□□□□□ -1.64
SDCBP-203ENST00000424270 DPY19L2P2Q6ZN68 376 aa4.79□□□□□ -1.64
SDCBP-203ENST00000424270 ZBTB46Q86UZ6 589 aa4.79□□□□□ -1.64
SDCBP-203ENST00000424270 OR8H3Q8N146 312 aa4.79□□□□□ -1.64
SDCBP-203ENST00000424270 LILRB2Q8N423 598 aa4.79□□□□□ -1.64
SDCBP-203ENST00000424270 GVQW1Q8N7I0 195 aa4.79□□□□□ -1.64
SDCBP-203ENST00000424270 OR5A2Q8NGI9 324 aa4.79□□□□□ -1.64
SDCBP-203ENST00000424270 DYNLRB2Q8TF09 96 aa4.79□□□□□ -1.64
SDCBP-203ENST00000424270 ABHD5Q8WTS1 349 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms