RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 C1orf122Q6ZSJ8 110 aa9.01□□□□□ -0.97
USP49-204ENST00000423567 GDPD3Q7L5L3 318 aa9.01□□□□□ -0.97
USP49-204ENST00000423567 ZDHHC22Q8N966 263 aa9.01□□□□□ -0.97
USP49-204ENST00000423567 OR5D13Q8NGL4 314 aa9.01□□□□□ -0.97
USP49-204ENST00000423567 PPP1R35Q8TAP8 253 aa9.01□□□□□ -0.97
USP49-204ENST00000423567 FBLIM1Q8WUP2 373 aa9.01□□□□□ -0.97
USP49-204ENST00000423567 NRG4Q8WWG1 115 aa9.01□□□□□ -0.97
USP49-204ENST00000423567 GCDHQ92947 438 aaPredicted RBP9.01□□□□□ -0.97
USP49-204ENST00000423567 SLC25A28Q96A46 364 aa9.01□□□□□ -0.97
USP49-204ENST00000423567 RFT1Q96AA3 541 aa9.01□□□□□ -0.97
USP49-204ENST00000423567 SPACA5Q96QH8 159 aa9.01□□□□□ -0.97
USP49-204ENST00000423567 GPER1Q99527 375 aa9.01□□□□□ -0.97
USP49-204ENST00000423567 METTL8Q9H825 291 aaKnown RBP9.01□□□□□ -0.97
USP49-204ENST00000423567 RHOFQ9HBH0 211 aa9.01□□□□□ -0.97
USP49-204ENST00000423567 NOX4Q9NPH5 578 aa9.01□□□□□ -0.97
USP49-204ENST00000423567 SIRT7Q9NRC8 400 aa9.01□□□□□ -0.97
USP49-204ENST00000423567 RBFOX1Q9NWB1 397 aaKnown RBP9.01□□□□□ -0.97
USP49-204ENST00000423567 MXRA5Q9NR99 2828 aa9.01□□□□□ -0.97
USP49-204ENST00000423567 FBN1P35555 2871 aaKnown RBP9.01□□□□□ -0.97
USP49-204ENST00000423567 DNAJC9-AS1A6NH13 148 aa9□□□□□ -0.97
USP49-204ENST00000423567 F8VVB4 439 aa9□□□□□ -0.97
USP49-204ENST00000423567 F8VWA3 439 aa9□□□□□ -0.97
USP49-204ENST00000423567 K7N7A8 449 aa9□□□□□ -0.97
USP49-204ENST00000423567 OGG1O15527 345 aa9□□□□□ -0.97
USP49-204ENST00000423567 ANGPTL7O43827 346 aa9□□□□□ -0.97
USP49-204ENST00000423567 HAND1O96004 215 aa9□□□□□ -0.97
USP49-204ENST00000423567 TMEM225BP0DP42 221 aa9□□□□□ -0.97
USP49-204ENST00000423567 WNT4P56705 351 aa9□□□□□ -0.97
USP49-204ENST00000423567 KISS1Q15726 138 aa9□□□□□ -0.97
USP49-204ENST00000423567 DEFB112Q30KQ8 113 aa9□□□□□ -0.97
USP49-204ENST00000423567 YIF1BQ5BJH7 314 aa9□□□□□ -0.97
USP49-204ENST00000423567 RUSC1-AS1Q66K80 236 aa9□□□□□ -0.97
USP49-204ENST00000423567 METAP1DQ6UB28 335 aaPredicted RBP9□□□□□ -0.97
USP49-204ENST00000423567 SATL1Q86VE3 508 aa9□□□□□ -0.97
USP49-204ENST00000423567 PDZD9Q8IXQ8 264 aa9□□□□□ -0.97
USP49-204ENST00000423567 SAXO1Q8IYX7 474 aa9□□□□□ -0.97
USP49-204ENST00000423567 OR5D18Q8NGL1 313 aa9□□□□□ -0.97
USP49-204ENST00000423567 GHSRQ92847 366 aa9□□□□□ -0.97
USP49-204ENST00000423567 MYDGFQ969H8 173 aa9□□□□□ -0.97
USP49-204ENST00000423567 TMEM106AQ96A25 262 aa9□□□□□ -0.97
USP49-204ENST00000423567 ZNF48Q96MX3 618 aaPredicted RBP9□□□□□ -0.97
USP49-204ENST00000423567 CKLFQ9UBR5 152 aa9□□□□□ -0.97
USP49-204ENST00000423567 FAM96BQ9Y3D0 163 aa9□□□□□ -0.97
USP49-204ENST00000423567 DOCK11Q5JSL3 2073 aa9□□□□□ -0.97
USP49-204ENST00000423567 PTGES3LE9PB15 166 aa8.99□□□□□ -0.97
USP49-204ENST00000423567 CLDN34H7C241 214 aa8.99□□□□□ -0.97
USP49-204ENST00000423567 SH2D1BO14796 132 aa8.99□□□□□ -0.97
USP49-204ENST00000423567 KDM4BO94953 1096 aa8.99□□□□□ -0.97
USP49-204ENST00000423567 GABRR1P24046 479 aa8.99□□□□□ -0.97
USP49-204ENST00000423567 C21orf33P30042 268 aaPredicted RBP8.99□□□□□ -0.97
USP49-204ENST00000423567 NPBWR2P48146 333 aa8.99□□□□□ -0.97
USP49-204ENST00000423567 BMXP51813 675 aa8.99□□□□□ -0.97
USP49-204ENST00000423567 SNU13P55769 128 aaKnown RBP8.99□□□□□ -0.97
USP49-204ENST00000423567 EDDM3BP56851 147 aa8.99□□□□□ -0.97
USP49-204ENST00000423567 Q499Y3 187 aa8.99□□□□□ -0.97
USP49-204ENST00000423567 C6orf141Q5SZD1 244 aa8.99□□□□□ -0.97
USP49-204ENST00000423567 DMKNQ6E0U4 476 aaPredicted RBP8.99□□□□□ -0.97
USP49-204ENST00000423567 IZUMO2Q6UXV1 221 aa8.99□□□□□ -0.97
USP49-204ENST00000423567 C12orf54Q6X4T0 127 aa8.99□□□□□ -0.97
USP49-204ENST00000423567 OR4M1Q8NGD0 313 aa8.99□□□□□ -0.97
USP49-204ENST00000423567 RPS4Y2Q8TD47 263 aa8.99□□□□□ -0.97
USP49-204ENST00000423567 RGP1Q92546 391 aaPredicted RBP8.99□□□□□ -0.97
USP49-204ENST00000423567 SNX22Q96L94 193 aa8.99□□□□□ -0.97
USP49-204ENST00000423567 DUX5Q96PT3 197 aa8.99□□□□□ -0.97
USP49-204ENST00000423567 S100A13Q99584 98 aa8.99□□□□□ -0.97
USP49-204ENST00000423567 MND1Q9BWT6 205 aa8.99□□□□□ -0.97
USP49-204ENST00000423567 FAM192AQ9GZU8 254 aa8.99□□□□□ -0.97
USP49-204ENST00000423567 SEBOXQ9HB31 216 aaPredicted RBP8.99□□□□□ -0.97
USP49-204ENST00000423567 HMG20AQ9NP66 347 aa8.99□□□□□ -0.97
USP49-204ENST00000423567 EXOSC4Q9NPD3 245 aaKnown RBP8.99□□□□□ -0.97
USP49-204ENST00000423567 ESM1Q9NQ30 184 aa8.99□□□□□ -0.97
USP49-204ENST00000423567 C19orf12Q9NSK7 152 aa8.99□□□□□ -0.97
USP49-204ENST00000423567 TAS2R4Q9NYW5 299 aa8.99□□□□□ -0.97
USP49-204ENST00000423567 GSTK1Q9Y2Q3 226 aa8.99□□□□□ -0.97
USP49-204ENST00000423567 SF3B6Q9Y3B4 125 aaKnown RBP8.99□□□□□ -0.97
USP49-204ENST00000423567 TPRKBQ9Y3C4 175 aa8.99□□□□□ -0.97
USP49-204ENST00000423567 PNMA8CA0A1B0GUJ8 204 aa8.98□□□□□ -0.97
USP49-204ENST00000423567 MDFIC2A0A1B0GVS7 189 aa8.98□□□□□ -0.97
USP49-204ENST00000423567 HOXA3O43365 443 aaPredicted RBP8.98□□□□□ -0.97
USP49-204ENST00000423567 ZNF737O75373 536 aa8.98□□□□□ -0.97
USP49-204ENST00000423567 PAHP00439 452 aa8.98□□□□□ -0.97
USP49-204ENST00000423567 LALBAP00709 142 aa8.98□□□□□ -0.97
USP49-204ENST00000423567 CDK1P06493 297 aa8.98□□□□□ -0.97
USP49-204ENST00000423567 RNASE1P07998 156 aaKnown RBP8.98□□□□□ -0.97
USP49-204ENST00000423567 CALCBP10092 127 aa8.98□□□□□ -0.97
USP49-204ENST00000423567 CELP19835 753 aa8.98□□□□□ -0.97
USP49-204ENST00000423567 DUSP1P28562 367 aa8.98□□□□□ -0.97
USP49-204ENST00000423567 UBE2E1P51965 193 aa8.98□□□□□ -0.97
USP49-204ENST00000423567 RIPK1Q13546 671 aa8.98□□□□□ -0.97
USP49-204ENST00000423567 EDDM3AQ14507 147 aa8.98□□□□□ -0.97
USP49-204ENST00000423567 ZNF146Q15072 292 aa8.98□□□□□ -0.97
USP49-204ENST00000423567 SLC9A3R2Q15599 337 aa8.98□□□□□ -0.97
USP49-204ENST00000423567 GRK1Q15835 563 aa8.98□□□□□ -0.97
USP49-204ENST00000423567 LAIR2Q6ISS4 152 aa8.98□□□□□ -0.97
USP49-204ENST00000423567 OR8H2Q8N162 312 aa8.98□□□□□ -0.97
USP49-204ENST00000423567 Q8N7P7 452 aa8.98□□□□□ -0.97
USP49-204ENST00000423567 NANOGP1Q8N7R0 232 aa8.98□□□□□ -0.97
USP49-204ENST00000423567 ZFP41Q8N8Y5 198 aa8.98□□□□□ -0.97
USP49-204ENST00000423567 TNFAIP8L1Q8WVP5 186 aa8.98□□□□□ -0.97
USP49-204ENST00000423567 THRSPQ92748 146 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms