RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 CPT2P23786 658 aa14.16□□□□□ -0.14
COL7A1-202ENST00000422991 CEBPDP49716 269 aaPredicted RBP14.16□□□□□ -0.14
COL7A1-202ENST00000422991 SNU13P55769 128 aaKnown RBP14.16□□□□□ -0.14
COL7A1-202ENST00000422991 RIPPLY3P57055 190 aa14.16□□□□□ -0.14
COL7A1-202ENST00000422991 GPR176Q14439 515 aa14.16□□□□□ -0.14
COL7A1-202ENST00000422991 ZNF146Q15072 292 aa14.16□□□□□ -0.14
COL7A1-202ENST00000422991 P2RY14Q15391 338 aa14.16□□□□□ -0.14
COL7A1-202ENST00000422991 NHLRC3Q5JS37 347 aa14.16□□□□□ -0.14
COL7A1-202ENST00000422991 HES5Q5TA89 166 aa14.16□□□□□ -0.14
COL7A1-202ENST00000422991 DUX4L9Q6RFH8 374 aaPredicted RBP14.16□□□□□ -0.14
COL7A1-202ENST00000422991 ZNF788Q6ZQV5 615 aa14.16□□□□□ -0.14
COL7A1-202ENST00000422991 CD177Q8N6Q3 437 aa14.16□□□□□ -0.14
COL7A1-202ENST00000422991 FAM216BQ8N7L0 139 aa14.16□□□□□ -0.14
COL7A1-202ENST00000422991 OR8B3Q8NGG8 313 aa14.16□□□□□ -0.14
COL7A1-202ENST00000422991 OR51T1Q8NGJ9 327 aa14.16□□□□□ -0.14
COL7A1-202ENST00000422991 NEIL1Q96FI4 390 aaPredicted RBP14.16□□□□□ -0.14
COL7A1-202ENST00000422991 SDSLQ96GA7 329 aa14.16□□□□□ -0.14
COL7A1-202ENST00000422991 OR8B2Q96RD0 313 aa14.16□□□□□ -0.14
COL7A1-202ENST00000422991 KCNK15Q9H427 330 aa14.16□□□□□ -0.14
COL7A1-202ENST00000422991 SEBOXQ9HB31 216 aaPredicted RBP14.16□□□□□ -0.14
COL7A1-202ENST00000422991 PCDHB16Q9NRJ7 776 aa14.16□□□□□ -0.14
COL7A1-202ENST00000422991 DUX4Q9UBX2 424 aa14.16□□□□□ -0.14
COL7A1-202ENST00000422991 OR14J1Q9UGF5 321 aa14.16□□□□□ -0.14
COL7A1-202ENST00000422991 STEAP1Q9UHE8 339 aa14.16□□□□□ -0.14
COL7A1-202ENST00000422991 SETD2Q9BYW2 2564 aaPredicted RBP14.16□□□□□ -0.14
COL7A1-202ENST00000422991 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.15□□□□□ -0.143e-7■□□□□ 9.2
COL7A1-202ENST00000422991 SIGLEC5O15389 551 aa14.15□□□□□ -0.14
COL7A1-202ENST00000422991 TMPRSS2O15393 492 aa14.15□□□□□ -0.14
COL7A1-202ENST00000422991 IL1AP01583 271 aa14.15□□□□□ -0.14
COL7A1-202ENST00000422991 CSTBP04080 98 aaKnown RBP14.15□□□□□ -0.14
COL7A1-202ENST00000422991 VSIG8P0DPA2 414 aa14.15□□□□□ -0.14
COL7A1-202ENST00000422991 PRDX2P32119 198 aa14.15□□□□□ -0.14
COL7A1-202ENST00000422991 GABRA2P47869 451 aa14.15□□□□□ -0.14
COL7A1-202ENST00000422991 SERPINB10P48595 397 aa14.15□□□□□ -0.14
COL7A1-202ENST00000422991 PITPNBP48739 271 aa14.15□□□□□ -0.14
COL7A1-202ENST00000422991 TMBIM6P55061 237 aa14.15□□□□□ -0.14
COL7A1-202ENST00000422991 CAV3P56539 151 aa14.15□□□□□ -0.14
COL7A1-202ENST00000422991 CLDN12P56749 244 aa14.15□□□□□ -0.14
COL7A1-202ENST00000422991 RBM11P57052 281 aaKnown RBP14.15□□□□□ -0.14
COL7A1-202ENST00000422991 SEC61A1P61619 476 aaKnown RBP14.15□□□□□ -0.14
COL7A1-202ENST00000422991 QRFPP83859 136 aa14.15□□□□□ -0.14
COL7A1-202ENST00000422991 BLMHQ13867 455 aa14.15□□□□□ -0.14
COL7A1-202ENST00000422991 PIGYQ3MUY2 71 aa14.15□□□□□ -0.14
COL7A1-202ENST00000422991 SFXN4Q6P4A7 337 aa14.15□□□□□ -0.14
COL7A1-202ENST00000422991 NLRC3Q7RTR2 1065 aa14.15□□□□□ -0.14
COL7A1-202ENST00000422991 SLC36A1Q7Z2H8 476 aa14.15□□□□□ -0.14
COL7A1-202ENST00000422991 OSR2Q8N2R0 312 aa14.15□□□□□ -0.14
COL7A1-202ENST00000422991 TMEM104Q8NE00 496 aa14.15□□□□□ -0.14
COL7A1-202ENST00000422991 RAB2BQ8WUD1 216 aa14.15□□□□□ -0.14
COL7A1-202ENST00000422991 C1orf159Q96HA4 380 aa14.15□□□□□ -0.14
COL7A1-202ENST00000422991 BCL7BQ9BQE9 202 aa14.15□□□□□ -0.14
COL7A1-202ENST00000422991 SMAD7O15105 426 aaKnown RBP14.14□□□□□ -0.15
COL7A1-202ENST00000422991 FCN3O75636 299 aa14.14□□□□□ -0.15
COL7A1-202ENST00000422991 HAND1O96004 215 aa14.14□□□□□ -0.15
COL7A1-202ENST00000422991 GTF2F2P13984 249 aa14.14□□□□□ -0.15
COL7A1-202ENST00000422991 SELLP14151 372 aa14.14□□□□□ -0.15
COL7A1-202ENST00000422991 ARSBP15848 533 aa14.14□□□□□ -0.15
COL7A1-202ENST00000422991 MGMTP16455 207 aa14.14□□□□□ -0.15
COL7A1-202ENST00000422991 DUSP1P28562 367 aa14.14□□□□□ -0.15
COL7A1-202ENST00000422991 RPS19P39019 145 aaKnown RBP14.14□□□□□ -0.15
COL7A1-202ENST00000422991 RANBP1P43487 201 aa14.14□□□□□ -0.15
COL7A1-202ENST00000422991 CAPZA1P52907 286 aa14.14□□□□□ -0.15
COL7A1-202ENST00000422991 IL13RA1P78552 427 aa14.14□□□□□ -0.15
COL7A1-202ENST00000422991 IL13RA2Q14627 380 aa14.14□□□□□ -0.15
COL7A1-202ENST00000422991 TMEM249Q2WGJ8 235 aa14.14□□□□□ -0.15
COL7A1-202ENST00000422991 ZNF841Q6ZN19 808 aa14.14□□□□□ -0.15
COL7A1-202ENST00000422991 FAM3DQ96BQ1 224 aa14.14□□□□□ -0.15
COL7A1-202ENST00000422991 MRPS24Q96EL2 167 aaKnown RBP14.14□□□□□ -0.15
COL7A1-202ENST00000422991 MED30Q96HR3 178 aa14.14□□□□□ -0.15
COL7A1-202ENST00000422991 CST11Q9H112 138 aa14.14□□□□□ -0.15
COL7A1-202ENST00000422991 METRNQ9UJH8 293 aa14.14□□□□□ -0.15
COL7A1-202ENST00000422991 MAB21L2Q9Y586 359 aa14.14□□□□□ -0.15
COL7A1-202ENST00000422991 CEPT1Q9Y6K0 416 aa14.14□□□□□ -0.15
COL7A1-202ENST00000422991 TLN2Q9Y4G6 2542 aa14.13□□□□□ -0.15
COL7A1-202ENST00000422991 TMEM14DPA8MWL7 114 aa14.13□□□□□ -0.15
COL7A1-202ENST00000422991 A8MXK9 166 aa14.13□□□□□ -0.15
COL7A1-202ENST00000422991 FAM157AC9JC47 383 aa14.13□□□□□ -0.15
COL7A1-202ENST00000422991 CRTAPO75718 401 aaPredicted RBP14.13□□□□□ -0.15
COL7A1-202ENST00000422991 SLC2A2P11168 524 aaPredicted RBP14.13□□□□□ -0.15
COL7A1-202ENST00000422991 UNC119Q13432 240 aa14.13□□□□□ -0.15
COL7A1-202ENST00000422991 ESCO2Q56NI9 601 aa14.13□□□□□ -0.15
COL7A1-202ENST00000422991 OR10K2Q6IF99 312 aa14.13□□□□□ -0.15
COL7A1-202ENST00000422991 Q6P435 159 aa14.13□□□□□ -0.15
COL7A1-202ENST00000422991 OR2W3Q7Z3T1 314 aa14.13□□□□□ -0.15
COL7A1-202ENST00000422991 ZNF561Q8N587 486 aa14.13□□□□□ -0.15
COL7A1-202ENST00000422991 OR51D1Q8NGF3 324 aa14.13□□□□□ -0.15
COL7A1-202ENST00000422991 KCNG3Q8TAE7 436 aa14.13□□□□□ -0.15
COL7A1-202ENST00000422991 NDNFQ8TB73 568 aa14.13□□□□□ -0.15
COL7A1-202ENST00000422991 FAM46BQ96A09 425 aa14.13□□□□□ -0.15
COL7A1-202ENST00000422991 C18orf12Q96KH6 178 aa14.13□□□□□ -0.15
COL7A1-202ENST00000422991 RBM38Q9H0Z9 239 aaKnown RBP14.13□□□□□ -0.15
COL7A1-202ENST00000422991 BANF2Q9H503 90 aa14.13□□□□□ -0.15
COL7A1-202ENST00000422991 LIN7BQ9HAP6 207 aa14.13□□□□□ -0.15
COL7A1-202ENST00000422991 FBLN5Q9UBX5 448 aa14.13□□□□□ -0.15
COL7A1-202ENST00000422991 GLS2Q9UI32 602 aa14.13□□□□□ -0.15
COL7A1-202ENST00000422991 DAPK2Q9UIK4 370 aa14.13□□□□□ -0.15
COL7A1-202ENST00000422991 ST3GAL6Q9Y274 331 aa14.13□□□□□ -0.15
COL7A1-202ENST00000422991 C2CD3Q4AC94 2353 aa14.13□□□□□ -0.15
COL7A1-202ENST00000422991 NF1P21359 2839 aa14.13□□□□□ -0.15
COL7A1-202ENST00000422991 MALRD1Q5VYJ5 2156 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms