RNA–Protein interactions for RNA: ENST00000422687.1

CDC42EP3-202, Transcript of CDC42 effector protein 3, humanhuman

TSL 4

Gene CDC42EP3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-202ENST00000422687 KRT34O76011 436 aa3.71□□□□□ -1.82
CDC42EP3-202ENST00000422687 LHBP01229 141 aa3.71□□□□□ -1.82
CDC42EP3-202ENST00000422687 OPN1SWP03999 348 aa3.71□□□□□ -1.82
CDC42EP3-202ENST00000422687 DUTP33316 252 aaKnown RBP3.71□□□□□ -1.82
CDC42EP3-202ENST00000422687 GUCA1AP43080 201 aaPredicted RBP3.71□□□□□ -1.82
CDC42EP3-202ENST00000422687 LUMP51884 338 aaPredicted RBP3.71□□□□□ -1.82
CDC42EP3-202ENST00000422687 SLC18A1P54219 525 aa3.71□□□□□ -1.82
CDC42EP3-202ENST00000422687 ARF6P62330 175 aa3.71□□□□□ -1.82
CDC42EP3-202ENST00000422687 VSNL1P62760 191 aa3.71□□□□□ -1.82
CDC42EP3-202ENST00000422687 TRAP1Q12931 704 aaKnown RBP3.71□□□□□ -1.82
CDC42EP3-202ENST00000422687 MPPED2Q15777 294 aa3.71□□□□□ -1.82
CDC42EP3-202ENST00000422687 KCNJ8Q15842 424 aa3.71□□□□□ -1.82
CDC42EP3-202ENST00000422687 AANATQ16613 207 aa3.71□□□□□ -1.82
CDC42EP3-202ENST00000422687 ANKDD1AQ495B1 522 aa3.71□□□□□ -1.82
CDC42EP3-202ENST00000422687 IFI44LQ53G44 452 aa3.71□□□□□ -1.82
CDC42EP3-202ENST00000422687 SLC35D3Q5M8T2 416 aa3.71□□□□□ -1.82
CDC42EP3-202ENST00000422687 TEX36Q5VZQ5 186 aa3.71□□□□□ -1.82
CDC42EP3-202ENST00000422687 EPGNQ6UW88 154 aa3.71□□□□□ -1.82
CDC42EP3-202ENST00000422687 BTN2A1Q7KYR7 527 aa3.71□□□□□ -1.82
CDC42EP3-202ENST00000422687 FAM122BQ7Z309 247 aa3.71□□□□□ -1.82
CDC42EP3-202ENST00000422687 RTN4RL2Q86UN3 420 aa3.71□□□□□ -1.82
CDC42EP3-202ENST00000422687 CALHM3Q86XJ0 350 aa3.71□□□□□ -1.82
CDC42EP3-202ENST00000422687 Q8N2B8 174 aa3.71□□□□□ -1.82
CDC42EP3-202ENST00000422687 Q8N7P7 452 aa3.71□□□□□ -1.82
CDC42EP3-202ENST00000422687 SPERTQ8NA61 448 aa3.71□□□□□ -1.82
CDC42EP3-202ENST00000422687 OR5L1Q8NGL2 311 aa3.71□□□□□ -1.82
CDC42EP3-202ENST00000422687 OR11L1Q8NGX0 322 aa3.71□□□□□ -1.82
CDC42EP3-202ENST00000422687 C8orf46Q8TAG6 207 aa3.71□□□□□ -1.82
CDC42EP3-202ENST00000422687 APOBEC3DQ96AK3 386 aaPredicted RBP3.71□□□□□ -1.82
CDC42EP3-202ENST00000422687 TECTBQ96PL2 329 aa3.71□□□□□ -1.82
CDC42EP3-202ENST00000422687 COQ7Q99807 217 aa3.71□□□□□ -1.82
CDC42EP3-202ENST00000422687 ECSITQ9BQ95 431 aa3.71□□□□□ -1.82
CDC42EP3-202ENST00000422687 C1orf21Q9H246 121 aa3.71□□□□□ -1.82
CDC42EP3-202ENST00000422687 RANBP3Q9H6Z4 567 aaPredicted RBP3.71□□□□□ -1.82
CDC42EP3-202ENST00000422687 KAT8Q9H7Z6 458 aaKnown RBP3.71□□□□□ -1.82
CDC42EP3-202ENST00000422687 TMEM100Q9NV29 134 aa3.71□□□□□ -1.82
CDC42EP3-202ENST00000422687 PTTG3PQ9NZH4 202 aa3.71□□□□□ -1.82
CDC42EP3-202ENST00000422687 PTTG2Q9NZH5 202 aa3.71□□□□□ -1.82
CDC42EP3-202ENST00000422687 RNF7Q9UBF6 113 aa3.71□□□□□ -1.82
CDC42EP3-202ENST00000422687 RIMS3Q9UJD0 308 aa3.71□□□□□ -1.82
CDC42EP3-202ENST00000422687 FOXA2Q9Y261 457 aaPredicted RBP3.71□□□□□ -1.82
CDC42EP3-202ENST00000422687 SIGLEC9Q9Y336 463 aa3.71□□□□□ -1.82
CDC42EP3-202ENST00000422687 CAB39Q9Y376 341 aaPredicted RBP3.71□□□□□ -1.82
CDC42EP3-202ENST00000422687 MED31Q9Y3C7 131 aa3.71□□□□□ -1.82
CDC42EP3-202ENST00000422687 MAB21L2Q9Y586 359 aa3.71□□□□□ -1.82
CDC42EP3-202ENST00000422687 TET2Q6N021 2002 aaPredicted RBP3.71□□□□□ -1.82
CDC42EP3-202ENST00000422687 TRAV38-1A0A0B4J264 116 aa3.7□□□□□ -1.82
CDC42EP3-202ENST00000422687 TRBV2A0A0J9YWF9 115 aa3.7□□□□□ -1.82
CDC42EP3-202ENST00000422687 PRSS37A4D1T9 235 aa3.7□□□□□ -1.82
CDC42EP3-202ENST00000422687 BTBD17A6NE02 478 aa3.7□□□□□ -1.82
CDC42EP3-202ENST00000422687 NPFFO15130 113 aa3.7□□□□□ -1.82
CDC42EP3-202ENST00000422687 RER1O15258 196 aa3.7□□□□□ -1.82
CDC42EP3-202ENST00000422687 ATP6V0E1O15342 81 aa3.7□□□□□ -1.82
CDC42EP3-202ENST00000422687 OR10H3O60404 316 aa3.7□□□□□ -1.82
CDC42EP3-202ENST00000422687 HLA-DPB1P04440 258 aa3.7□□□□□ -1.82
CDC42EP3-202ENST00000422687 CD14P08571 375 aa3.7□□□□□ -1.82
CDC42EP3-202ENST00000422687 CTLA4P16410 223 aa3.7□□□□□ -1.82
CDC42EP3-202ENST00000422687 ZNF26P17031 533 aaPredicted RBP3.7□□□□□ -1.82
CDC42EP3-202ENST00000422687 CA6P23280 308 aa3.7□□□□□ -1.82
CDC42EP3-202ENST00000422687 MAPK3P27361 379 aaPredicted RBP3.7□□□□□ -1.82
CDC42EP3-202ENST00000422687 UBE2E1P51965 193 aa3.7□□□□□ -1.82
CDC42EP3-202ENST00000422687 EMX1Q04741 257 aaPredicted RBP3.7□□□□□ -1.82
CDC42EP3-202ENST00000422687 SELPLGQ14242 412 aa3.7□□□□□ -1.82
CDC42EP3-202ENST00000422687 GK2Q14410 553 aaPredicted RBP3.7□□□□□ -1.82
CDC42EP3-202ENST00000422687 KRT71Q3SY84 523 aa3.7□□□□□ -1.82
CDC42EP3-202ENST00000422687 MESTQ5EB52 335 aa3.7□□□□□ -1.82
CDC42EP3-202ENST00000422687 BEND6Q5SZJ8 279 aaPredicted RBP3.7□□□□□ -1.82
CDC42EP3-202ENST00000422687 PRAMEF6Q5VXH4 476 aa3.7□□□□□ -1.82
CDC42EP3-202ENST00000422687 VMO1Q7Z5L0 202 aa3.7□□□□□ -1.82
CDC42EP3-202ENST00000422687 KLHDC1Q8N7A1 406 aa3.7□□□□□ -1.82
CDC42EP3-202ENST00000422687 C19orf18Q8NEA5 215 aa3.7□□□□□ -1.82
CDC42EP3-202ENST00000422687 OR4S1Q8NGB4 309 aa3.7□□□□□ -1.82
CDC42EP3-202ENST00000422687 SCARB1Q8WTV0 552 aa3.7□□□□□ -1.82
CDC42EP3-202ENST00000422687 RASSF5Q8WWW0 418 aa3.7□□□□□ -1.82
CDC42EP3-202ENST00000422687 BPIFA2Q96DR5 249 aa3.7□□□□□ -1.82
CDC42EP3-202ENST00000422687 ZNF583Q96ND8 569 aa3.7□□□□□ -1.82
CDC42EP3-202ENST00000422687 CGREF1Q99674 301 aa3.7□□□□□ -1.82
CDC42EP3-202ENST00000422687 CCDC28BQ9BUN5 200 aa3.7□□□□□ -1.82
CDC42EP3-202ENST00000422687 HCAR1Q9BXC0 346 aa3.7□□□□□ -1.82
CDC42EP3-202ENST00000422687 SLC22A4Q9H015 551 aa3.7□□□□□ -1.82
CDC42EP3-202ENST00000422687 HDHD2Q9H0R4 259 aa3.7□□□□□ -1.82
CDC42EP3-202ENST00000422687 MMP28Q9H239 520 aa3.7□□□□□ -1.82
CDC42EP3-202ENST00000422687 CCDC167Q9P0B6 97 aa3.7□□□□□ -1.82
CDC42EP3-202ENST00000422687 PRPF19Q9UMS4 504 aaKnown RBP3.7□□□□□ -1.82
CDC42EP3-202ENST00000422687 FOXJ3Q9UPW0 622 aa3.7□□□□□ -1.82
CDC42EP3-202ENST00000422687 NOP16Q9Y3C1 178 aaKnown RBP3.7□□□□□ -1.82
CDC42EP3-202ENST00000422687 LHFPL6Q9Y693 200 aa3.7□□□□□ -1.82
CDC42EP3-202ENST00000422687 STARD9Q9P2P6 4700 aa3.7□□□□□ -1.82
CDC42EP3-202ENST00000422687 CSMD3Q7Z407 3707 aa3.7□□□□□ -1.82
CDC42EP3-202ENST00000422687 PLECQ15149 4684 aaKnown RBP3.7□□□□□ -1.82
CDC42EP3-202ENST00000422687 TRAV18A0A075B6X5 111 aa3.69□□□□□ -1.82
CDC42EP3-202ENST00000422687 TRAV27A0A087WT01 109 aa3.69□□□□□ -1.82
CDC42EP3-202ENST00000422687 TRBV5-5A0A0J9YX44 114 aa3.69□□□□□ -1.82
CDC42EP3-202ENST00000422687 CD300LBA8K4G0 201 aa3.69□□□□□ -1.82
CDC42EP3-202ENST00000422687 PRAC2D3DTV9 90 aa3.69□□□□□ -1.82
CDC42EP3-202ENST00000422687 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.69□□□□□ -1.82
CDC42EP3-202ENST00000422687 H7C1C5 153 aa3.69□□□□□ -1.82
CDC42EP3-202ENST00000422687 GMDSO60547 372 aa3.69□□□□□ -1.82
CDC42EP3-202ENST00000422687 SHOX2O60902 331 aaPredicted RBP3.69□□□□□ -1.82
CDC42EP3-202ENST00000422687 KHDRBS3O75525 346 aaKnown RBP3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms