RNA–Protein interactions for RNA: ENST00000422245.5

SQSTM1-203, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-203ENST00000422245 SSX2Q16385 188 aa9.33□□□□□ -0.92
SQSTM1-203ENST00000422245 TP53I3Q53FA7 332 aa9.33□□□□□ -0.92
SQSTM1-203ENST00000422245 PLA1AQ53H76 456 aa9.33□□□□□ -0.92
SQSTM1-203ENST00000422245 MINOS1Q5TGZ0 78 aa9.33□□□□□ -0.92
SQSTM1-203ENST00000422245 TMEM244Q5VVB8 128 aa9.33□□□□□ -0.92
SQSTM1-203ENST00000422245 ZBTB49Q6ZSB9 765 aa9.33□□□□□ -0.92
SQSTM1-203ENST00000422245 LHFPL2Q6ZUX7 228 aa9.33□□□□□ -0.92
SQSTM1-203ENST00000422245 UTS2BQ765I0 119 aa9.33□□□□□ -0.92
SQSTM1-203ENST00000422245 DYNAPQ8N1N2 210 aa9.33□□□□□ -0.92
SQSTM1-203ENST00000422245 C11orf44Q8N8P7 122 aa9.33□□□□□ -0.92
SQSTM1-203ENST00000422245 OR2G2Q8NGZ5 317 aa9.33□□□□□ -0.92
SQSTM1-203ENST00000422245 TRUB1Q8WWH5 349 aaKnown RBP9.33□□□□□ -0.92
SQSTM1-203ENST00000422245 SPSB1Q96BD6 273 aa9.33□□□□□ -0.92
SQSTM1-203ENST00000422245 RBFOX1Q9NWB1 397 aaKnown RBP9.33□□□□□ -0.92
SQSTM1-203ENST00000422245 GLS2Q9UI32 602 aa9.33□□□□□ -0.92
SQSTM1-203ENST00000422245 MINOS1-NBL1R4GNA1 71 aa9.33□□□□□ -0.92
SQSTM1-203ENST00000422245 MEX3AA1L020 520 aaKnown RBP9.32□□□□□ -0.92
SQSTM1-203ENST00000422245 MEGF11A6BM72 1044 aa9.32□□□□□ -0.92
SQSTM1-203ENST00000422245 SAC3D1A6NKF1 404 aa9.32□□□□□ -0.92
SQSTM1-203ENST00000422245 MGST3O14880 152 aa9.32□□□□□ -0.92
SQSTM1-203ENST00000422245 SLC16A6O15403 523 aa9.32□□□□□ -0.92
SQSTM1-203ENST00000422245 INMTO95050 263 aa9.32□□□□□ -0.92
SQSTM1-203ENST00000422245 IGHA1P01876 353 aa9.32□□□□□ -0.92
SQSTM1-203ENST00000422245 ALDOBP05062 364 aa9.32□□□□□ -0.92
SQSTM1-203ENST00000422245 AZGP1P25311 298 aaKnown RBP9.32□□□□□ -0.92
SQSTM1-203ENST00000422245 MTCP1P56278 107 aa9.32□□□□□ -0.92
SQSTM1-203ENST00000422245 P2RX3P56373 397 aa9.32□□□□□ -0.92
SQSTM1-203ENST00000422245 ACTA2P62736 377 aa9.32□□□□□ -0.92
SQSTM1-203ENST00000422245 ACTG2P63267 376 aa9.32□□□□□ -0.92
SQSTM1-203ENST00000422245 ZNF146Q15072 292 aa9.32□□□□□ -0.92
SQSTM1-203ENST00000422245 FDX2Q6P4F2 183 aa9.32□□□□□ -0.92
SQSTM1-203ENST00000422245 KCTD20Q7Z5Y7 419 aa9.32□□□□□ -0.92
SQSTM1-203ENST00000422245 FAM58AQ8N1B3 248 aa9.32□□□□□ -0.92
SQSTM1-203ENST00000422245 ZNF676Q8N7Q3 588 aa9.32□□□□□ -0.92
SQSTM1-203ENST00000422245 ADAT3Q96EY9 351 aaPredicted RBP9.32□□□□□ -0.92
SQSTM1-203ENST00000422245 OPALINQ96PE5 141 aa9.32□□□□□ -0.92
SQSTM1-203ENST00000422245 MBOAT4Q96T53 435 aa9.32□□□□□ -0.92
SQSTM1-203ENST00000422245 CHST6Q9GZX3 395 aa9.32□□□□□ -0.92
SQSTM1-203ENST00000422245 SERTAD4Q9NUC0 356 aa9.32□□□□□ -0.92
SQSTM1-203ENST00000422245 IL36RNQ9UBH0 155 aa9.32□□□□□ -0.92
SQSTM1-203ENST00000422245 ORC6Q9Y5N6 252 aa9.32□□□□□ -0.92
SQSTM1-203ENST00000422245 PLXNB1O43157 2135 aa9.31□□□□□ -0.92
SQSTM1-203ENST00000422245 IGHV2-26A0A0B4J1V2 119 aa9.31□□□□□ -0.92
SQSTM1-203ENST00000422245 IGKV1-9A0A0C4DH69 117 aa9.31□□□□□ -0.92
SQSTM1-203ENST00000422245 DAPL1A0PJW8 107 aa9.31□□□□□ -0.92
SQSTM1-203ENST00000422245 SNTNA6NMZ2 147 aa9.31□□□□□ -0.92
SQSTM1-203ENST00000422245 H3BUI4 141 aa9.31□□□□□ -0.92
SQSTM1-203ENST00000422245 PSPNO60542 156 aa9.31□□□□□ -0.92
SQSTM1-203ENST00000422245 ENTPD6O75354 484 aa9.31□□□□□ -0.92
SQSTM1-203ENST00000422245 ISG15P05161 165 aa9.31□□□□□ -0.92
SQSTM1-203ENST00000422245 OCM2P0CE71 109 aa9.31□□□□□ -0.92
SQSTM1-203ENST00000422245 OCMP0CE72 109 aaPredicted RBP9.31□□□□□ -0.92
SQSTM1-203ENST00000422245 PRKACAP17612 351 aa9.31□□□□□ -0.92
SQSTM1-203ENST00000422245 ATF1P18846 271 aa9.31□□□□□ -0.92
SQSTM1-203ENST00000422245 BCL3P20749 454 aa9.31□□□□□ -0.92
SQSTM1-203ENST00000422245 ERP29P30040 261 aaKnown RBP9.31□□□□□ -0.92
SQSTM1-203ENST00000422245 OR3A1P47881 315 aa9.31□□□□□ -0.92
SQSTM1-203ENST00000422245 NPBWR2P48146 333 aa9.31□□□□□ -0.92
SQSTM1-203ENST00000422245 CCR9P51686 369 aa9.31□□□□□ -0.92
SQSTM1-203ENST00000422245 SLC34A1Q06495 639 aa9.31□□□□□ -0.92
SQSTM1-203ENST00000422245 IL18R1Q13478 541 aa9.31□□□□□ -0.92
SQSTM1-203ENST00000422245 HABP2Q14520 560 aaPredicted RBP9.31□□□□□ -0.92
SQSTM1-203ENST00000422245 BEAN1Q3B7T3 259 aa9.31□□□□□ -0.92
SQSTM1-203ENST00000422245 SLC25A30Q5SVS4 291 aa9.31□□□□□ -0.92
SQSTM1-203ENST00000422245 LDLRAD2Q5SZI1 272 aa9.31□□□□□ -0.92
SQSTM1-203ENST00000422245 KPRPQ5T749 579 aaPredicted RBP9.31□□□□□ -0.92
SQSTM1-203ENST00000422245 SAMD5Q5TGI4 173 aa9.31□□□□□ -0.92
SQSTM1-203ENST00000422245 MEDAGQ5VYS4 303 aa9.31□□□□□ -0.92
SQSTM1-203ENST00000422245 CCBE1Q6UXH8 406 aaPredicted RBP9.31□□□□□ -0.92
SQSTM1-203ENST00000422245 TRAPPC6BQ86SZ2 158 aa9.31□□□□□ -0.92
SQSTM1-203ENST00000422245 TMEM219Q86XT9 240 aa9.31□□□□□ -0.92
SQSTM1-203ENST00000422245 RDH10Q8IZV5 341 aa9.31□□□□□ -0.92
SQSTM1-203ENST00000422245 TPRX1Q8N7U7 411 aa9.31□□□□□ -0.92
SQSTM1-203ENST00000422245 OR4S1Q8NGB4 309 aa9.31□□□□□ -0.92
SQSTM1-203ENST00000422245 OR52N4Q8NGI2 321 aa9.31□□□□□ -0.92
SQSTM1-203ENST00000422245 NDNFQ8TB73 568 aa9.31□□□□□ -0.92
SQSTM1-203ENST00000422245 RNF166Q96A37 237 aaPredicted RBP9.31□□□□□ -0.92
SQSTM1-203ENST00000422245 RNFT2Q96EX2 444 aa9.31□□□□□ -0.92
SQSTM1-203ENST00000422245 MRPL48Q96GC5 212 aaKnown RBP9.31□□□□□ -0.92
SQSTM1-203ENST00000422245 CLEC7AQ9BXN2 247 aa9.31□□□□□ -0.92
SQSTM1-203ENST00000422245 PRSS22Q9GZN4 317 aa9.31□□□□□ -0.92
SQSTM1-203ENST00000422245 TMEM133Q9H2Q1 129 aa9.31□□□□□ -0.92
SQSTM1-203ENST00000422245 GAL3ST2Q9H3Q3 398 aa9.31□□□□□ -0.92
SQSTM1-203ENST00000422245 NEK6Q9HC98 313 aa9.31□□□□□ -0.92
SQSTM1-203ENST00000422245 EXOSC4Q9NPD3 245 aaKnown RBP9.31□□□□□ -0.92
SQSTM1-203ENST00000422245 HHLA2Q9UM44 414 aa9.31□□□□□ -0.92
SQSTM1-203ENST00000422245 UBE2J1Q9Y385 318 aaPredicted RBP9.31□□□□□ -0.92
SQSTM1-203ENST00000422245 PCDHGB5Q9Y5G0 923 aa9.31□□□□□ -0.92
SQSTM1-203ENST00000422245 TRGV10A0A0A0MS01 117 aa9.3□□□□□ -0.92
SQSTM1-203ENST00000422245 FUOMA2VDF0 154 aa9.3□□□□□ -0.92
SQSTM1-203ENST00000422245 XPNPEP2O43895 674 aa9.3□□□□□ -0.92
SQSTM1-203ENST00000422245 PEX14O75381 377 aa9.3□□□□□ -0.92
SQSTM1-203ENST00000422245 MT-ND2P03891 347 aa9.3□□□□□ -0.92
SQSTM1-203ENST00000422245 ALPLP05186 524 aa9.3□□□□□ -0.92
SQSTM1-203ENST00000422245 HTR1AP08908 422 aa9.3□□□□□ -0.92
SQSTM1-203ENST00000422245 RAB13P51153 203 aa9.3□□□□□ -0.92
SQSTM1-203ENST00000422245 SNRPGP62308 76 aaKnown RBP9.3□□□□□ -0.92
SQSTM1-203ENST00000422245 PDZK1IP1Q13113 114 aa9.3□□□□□ -0.92
SQSTM1-203ENST00000422245 OR52W1Q6IF63 320 aa9.3□□□□□ -0.92
SQSTM1-203ENST00000422245 NDUFA11Q86Y39 141 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms