RNA–Protein interactions for RNA: ENST00000422109.6

CTCFL-203, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,964 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-203ENST00000422109 ZNF716A6NP11 495 aa11.92□□□□□ -0.5
CTCFL-203ENST00000422109 RNASEK-C17orf49H0YIS7 233 aa11.92□□□□□ -0.5
CTCFL-203ENST00000422109 CTSDP07339 412 aaPredicted RBP11.92□□□□□ -0.5
CTCFL-203ENST00000422109 FOSL1P15407 271 aa11.92□□□□□ -0.5
CTCFL-203ENST00000422109 PRKACAP17612 351 aa11.92□□□□□ -0.5
CTCFL-203ENST00000422109 CHATP28329 748 aa11.92□□□□□ -0.5
CTCFL-203ENST00000422109 NAAAQ02083 359 aa11.92□□□□□ -0.5
CTCFL-203ENST00000422109 NHLH2Q02577 135 aa11.92□□□□□ -0.5
CTCFL-203ENST00000422109 ACER2Q5QJU3 275 aa11.92□□□□□ -0.5
CTCFL-203ENST00000422109 CPEB3Q8NE35 698 aaKnown RBP11.92□□□□□ -0.5
CTCFL-203ENST00000422109 SLAMF9Q96A28 289 aa11.92□□□□□ -0.5
CTCFL-203ENST00000422109 GJE1A6NN92 205 aa11.91□□□□□ -0.5
CTCFL-203ENST00000422109 PRH1P02810 166 aa11.91□□□□□ -0.5
CTCFL-203ENST00000422109 ALDH3B1P43353 468 aa11.91□□□□□ -0.5
CTCFL-203ENST00000422109 IL15RAQ13261 267 aa11.91□□□□□ -0.5
CTCFL-203ENST00000422109 FAM76BQ5HYJ3 339 aa11.91□□□□□ -0.5
CTCFL-203ENST00000422109 TIPARPQ7Z3E1 657 aaKnown RBP11.91□□□□□ -0.5
CTCFL-203ENST00000422109 PPP1R32Q7Z5V6 425 aa11.91□□□□□ -0.5
CTCFL-203ENST00000422109 ZNF611Q8N823 705 aa11.91□□□□□ -0.5
CTCFL-203ENST00000422109 SECTM1Q8WVN6 248 aa11.91□□□□□ -0.5
CTCFL-203ENST00000422109 NRIP2Q9BQI9 281 aa11.91□□□□□ -0.5
CTCFL-203ENST00000422109 MAGT1Q9H0U3 335 aa11.91□□□□□ -0.5
CTCFL-203ENST00000422109 SH3BGRL3Q9H299 93 aa11.91□□□□□ -0.5
CTCFL-203ENST00000422109 SLC2A9Q9NRM0 540 aa11.91□□□□□ -0.5
CTCFL-203ENST00000422109 PARPBPQ9NWS1 579 aa11.91□□□□□ -0.5
CTCFL-203ENST00000422109 PLA2G3Q9NZ20 509 aa11.91□□□□□ -0.5
CTCFL-203ENST00000422109 RCL1Q9Y2P8 373 aaKnown RBP11.91□□□□□ -0.5
CTCFL-203ENST00000422109 DEDDO75618 318 aa11.91□□□□□ -0.5
CTCFL-203ENST00000422109 ONECUT2O95948 504 aa11.91□□□□□ -0.5
CTCFL-203ENST00000422109 EDN3P14138 238 aa11.91□□□□□ -0.5
CTCFL-203ENST00000422109 AADACP22760 399 aa11.91□□□□□ -0.5
CTCFL-203ENST00000422109 FBXW12Q6X9E4 464 aa11.91□□□□□ -0.5
CTCFL-203ENST00000422109 OR2V1Q8NHB1 315 aa11.91□□□□□ -0.5
CTCFL-203ENST00000422109 SPSB1Q96BD6 273 aa11.91□□□□□ -0.5
CTCFL-203ENST00000422109 GPR35Q9HC97 309 aa11.91□□□□□ -0.5
CTCFL-203ENST00000422109 TCFL5Q9UL49 500 aa11.91□□□□□ -0.5
CTCFL-203ENST00000422109 AMDHD2Q9Y303 409 aa11.91□□□□□ -0.5
CTCFL-203ENST00000422109 TIMM10BQ9Y5J6 103 aa11.91□□□□□ -0.5
CTCFL-203ENST00000422109 MED13Q9UHV7 2174 aa11.91□□□□□ -0.5
CTCFL-203ENST00000422109 LRRC3CA6NJW4 275 aa11.91□□□□□ -0.5
CTCFL-203ENST00000422109 LAMTOR5O43504 91 aa11.91□□□□□ -0.5
CTCFL-203ENST00000422109 TNFSF12O43508 249 aa11.91□□□□□ -0.5
CTCFL-203ENST00000422109 SRD5A2P31213 254 aa11.91□□□□□ -0.5
CTCFL-203ENST00000422109 HERV-K104P61576 105 aa11.91□□□□□ -0.5
CTCFL-203ENST00000422109 MALLQ13021 153 aa11.91□□□□□ -0.5
CTCFL-203ENST00000422109 PDZK1IP1Q13113 114 aa11.91□□□□□ -0.5
CTCFL-203ENST00000422109 CLINT1Q14677 625 aa11.91□□□□□ -0.5
CTCFL-203ENST00000422109 TGIF1Q15583 401 aa11.91□□□□□ -0.5
CTCFL-203ENST00000422109 NSUN5P2Q63ZY6 315 aa11.91□□□□□ -0.5
CTCFL-203ENST00000422109 Q6ZPA2 131 aa11.91□□□□□ -0.5
CTCFL-203ENST00000422109 LINC00696Q6ZRV3 163 aa11.91□□□□□ -0.5
CTCFL-203ENST00000422109 RHBDD1Q8TEB9 315 aa11.91□□□□□ -0.5
CTCFL-203ENST00000422109 THOC3Q96J01 351 aaKnown RBP11.91□□□□□ -0.5
CTCFL-203ENST00000422109 NAA60Q9H7X0 242 aa11.91□□□□□ -0.5
CTCFL-203ENST00000422109 DAOP14920 347 aa11.9□□□□□ -0.5
CTCFL-203ENST00000422109 GPM6AP51674 278 aa11.9□□□□□ -0.5
CTCFL-203ENST00000422109 FOXL2NBQ6ZUU3 175 aa11.9□□□□□ -0.5
CTCFL-203ENST00000422109 CDX2Q99626 313 aaPredicted RBP11.9□□□□□ -0.5
CTCFL-203ENST00000422109 BCO1Q9HAY6 547 aa11.9□□□□□ -0.5
CTCFL-203ENST00000422109 NOSIPQ9Y314 301 aaKnown RBP11.9□□□□□ -0.5
CTCFL-203ENST00000422109 C5orf49A4QMS7 147 aa11.9□□□□□ -0.5
CTCFL-203ENST00000422109 CST2P09228 141 aa11.9□□□□□ -0.5
CTCFL-203ENST00000422109 HAAOP46952 286 aa11.9□□□□□ -0.5
CTCFL-203ENST00000422109 CYB561P49447 251 aa11.9□□□□□ -0.5
CTCFL-203ENST00000422109 CEBPGP53567 150 aa11.9□□□□□ -0.5
CTCFL-203ENST00000422109 LHFPL2Q6ZUX7 228 aa11.9□□□□□ -0.5
CTCFL-203ENST00000422109 OR56B2PQ8NGI1 322 aa11.9□□□□□ -0.5
CTCFL-203ENST00000422109 CT55Q8WUE5 264 aa11.9□□□□□ -0.5
CTCFL-203ENST00000422109 ZNF488Q96MN9 340 aa11.9□□□□□ -0.5
CTCFL-203ENST00000422109 ZNF286AQ9HBT8 521 aa11.9□□□□□ -0.5
CTCFL-203ENST00000422109 WFDC1Q9HC57 220 aa11.9□□□□□ -0.5
CTCFL-203ENST00000422109 SH2D2AQ9NP31 389 aa11.9□□□□□ -0.5
CTCFL-203ENST00000422109 LRFN1Q9P244 771 aa11.9□□□□□ -0.5
CTCFL-203ENST00000422109 MRPL33O75394 65 aaKnown RBP11.89□□□□□ -0.51
CTCFL-203ENST00000422109 CST4P01036 141 aa11.89□□□□□ -0.51
CTCFL-203ENST00000422109 BCL3P20749 454 aa11.89□□□□□ -0.51
CTCFL-203ENST00000422109 ARF1P84077 181 aaKnown RBP11.89□□□□□ -0.51
CTCFL-203ENST00000422109 ZFP36L1Q07352 338 aaKnown RBP11.89□□□□□ -0.51
CTCFL-203ENST00000422109 TMEM187Q14656 261 aa11.89□□□□□ -0.51
CTCFL-203ENST00000422109 ARL6IP1Q15041 203 aa11.89□□□□□ -0.51
CTCFL-203ENST00000422109 TSC22D1Q15714 1073 aa11.89□□□□□ -0.51
CTCFL-203ENST00000422109 TMEM268Q5VZI3 342 aa11.89□□□□□ -0.51
CTCFL-203ENST00000422109 OR10Z1Q8NGY1 313 aa11.89□□□□□ -0.51
CTCFL-203ENST00000422109 UBALD1Q8TB05 177 aa11.89□□□□□ -0.51
CTCFL-203ENST00000422109 INTS12Q96CB8 462 aaKnown RBP11.89□□□□□ -0.51
CTCFL-203ENST00000422109 TP53RKQ96S44 253 aa11.89□□□□□ -0.51
CTCFL-203ENST00000422109 EIF5A2Q9GZV4 153 aaKnown RBP11.89□□□□□ -0.51
CTCFL-203ENST00000422109 SLC7A10Q9NS82 523 aa11.89□□□□□ -0.51
CTCFL-203ENST00000422109 DNAJB11Q9UBS4 358 aa11.89□□□□□ -0.51
CTCFL-203ENST00000422109 NTN3O00634 580 aaPredicted RBP11.89□□□□□ -0.51
CTCFL-203ENST00000422109 SNAPINO95295 136 aa11.89□□□□□ -0.51
CTCFL-203ENST00000422109 LYL1P12980 280 aa11.89□□□□□ -0.51
CTCFL-203ENST00000422109 GLP1RP43220 463 aa11.89□□□□□ -0.51
CTCFL-203ENST00000422109 CAV2P51636 162 aa11.89□□□□□ -0.51
CTCFL-203ENST00000422109 SURF2Q15527 256 aaPredicted RBP11.89□□□□□ -0.51
CTCFL-203ENST00000422109 MIDNQ504T8 468 aa11.89□□□□□ -0.51
CTCFL-203ENST00000422109 DCAF12Q5T6F0 453 aa11.89□□□□□ -0.51
CTCFL-203ENST00000422109 EIF5AL1Q6IS14 154 aaKnown RBP11.89□□□□□ -0.51
CTCFL-203ENST00000422109 CPT1CQ8TCG5 803 aa11.89□□□□□ -0.51
CTCFL-203ENST00000422109 SGCZQ96LD1 299 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms