RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 OR8U1Q8NH10 309 aa3.8□□□□□ -1.8
SFXN1-202ENST00000421887 OCC1Q8TAD7 63 aa3.8□□□□□ -1.8
SFXN1-202ENST00000421887 LRRC29Q8WV35 223 aa3.8□□□□□ -1.8
SFXN1-202ENST00000421887 ST6GALNAC6Q969X2 333 aa3.8□□□□□ -1.8
SFXN1-202ENST00000421887 TESCQ96BS2 214 aa3.8□□□□□ -1.8
SFXN1-202ENST00000421887 MOB3AQ96BX8 217 aa3.8□□□□□ -1.8
SFXN1-202ENST00000421887 C12orf43Q96C57 262 aaKnown RBP3.8□□□□□ -1.8
SFXN1-202ENST00000421887 MALSU1Q96EH3 234 aa3.8□□□□□ -1.8
SFXN1-202ENST00000421887 OR52E6Q96RD3 313 aa3.8□□□□□ -1.8
SFXN1-202ENST00000421887 P2RX4Q99571 388 aa3.8□□□□□ -1.8
SFXN1-202ENST00000421887 FEVQ99581 238 aa3.8□□□□□ -1.8
SFXN1-202ENST00000421887 GFI1Q99684 422 aa3.8□□□□□ -1.8
SFXN1-202ENST00000421887 TM2D3Q9BRN9 247 aa3.8□□□□□ -1.8
SFXN1-202ENST00000421887 ADAT1Q9BUB4 502 aaKnown RBP3.8□□□□□ -1.8
SFXN1-202ENST00000421887 WDR76Q9H967 626 aa3.8□□□□□ -1.8
SFXN1-202ENST00000421887 SLCO1B3Q9NPD5 702 aa3.8□□□□□ -1.8
SFXN1-202ENST00000421887 ZFP57Q9NU63 452 aa3.8□□□□□ -1.8
SFXN1-202ENST00000421887 UGT2A1Q9Y4X1 527 aa3.8□□□□□ -1.8
SFXN1-202ENST00000421887 DYNC2H1Q8NCM8 4307 aaKnown RBP3.79□□□□□ -1.8
SFXN1-202ENST00000421887 IGKV1D-43A0A0B4J1Z2 117 aa3.79□□□□□ -1.8
SFXN1-202ENST00000421887 C5orf52A6NGY3 159 aa3.79□□□□□ -1.8
SFXN1-202ENST00000421887 POLR3GO15318 223 aaPredicted RBP3.79□□□□□ -1.8
SFXN1-202ENST00000421887 HSPA12AO43301 675 aa3.79□□□□□ -1.8
SFXN1-202ENST00000421887 TXNL1O43396 289 aa3.79□□□□□ -1.8
SFXN1-202ENST00000421887 CHP2O43745 196 aa3.79□□□□□ -1.8
SFXN1-202ENST00000421887 FCN3O75636 299 aa3.79□□□□□ -1.8
SFXN1-202ENST00000421887 C1QCP02747 245 aa3.79□□□□□ -1.8
SFXN1-202ENST00000421887 ARG1P05089 322 aa3.79□□□□□ -1.8
SFXN1-202ENST00000421887 CHRNGP07510 517 aa3.79□□□□□ -1.8
SFXN1-202ENST00000421887 OR2T7P0C7T2 308 aa3.79□□□□□ -1.8
SFXN1-202ENST00000421887 ASAH2BP0C7U1 165 aa3.79□□□□□ -1.8
SFXN1-202ENST00000421887 DUX4L4P0CJ87 422 aa3.79□□□□□ -1.8
SFXN1-202ENST00000421887 ETS2P15036 469 aa3.79□□□□□ -1.8
SFXN1-202ENST00000421887 NAA10P41227 235 aaPredicted RBP3.79□□□□□ -1.8
SFXN1-202ENST00000421887 ARHGDIBP52566 201 aa3.79□□□□□ -1.8
SFXN1-202ENST00000421887 UGT2B15P54855 530 aa3.79□□□□□ -1.8
SFXN1-202ENST00000421887 SLC35B1P78383 322 aa3.79□□□□□ -1.8
SFXN1-202ENST00000421887 SLC34A1Q06495 639 aa3.79□□□□□ -1.8
SFXN1-202ENST00000421887 GAGE2BQ13066 116 aa3.79□□□□□ -1.8
SFXN1-202ENST00000421887 AQP6Q13520 282 aa3.79□□□□□ -1.8
SFXN1-202ENST00000421887 ENDOGQ14249 297 aaKnown RBP3.79□□□□□ -1.8
SFXN1-202ENST00000421887 MAPK11Q15759 364 aa3.79□□□□□ -1.8
SFXN1-202ENST00000421887 KRTAP13-3Q3SY46 172 aa3.79□□□□□ -1.8
SFXN1-202ENST00000421887 GAGE2EQ4V326 116 aa3.79□□□□□ -1.8
SFXN1-202ENST00000421887 GAGE2AQ6NT46 116 aa3.79□□□□□ -1.8
SFXN1-202ENST00000421887 ZNF613Q6PF04 617 aa3.79□□□□□ -1.8
SFXN1-202ENST00000421887 SLC25A47Q6Q0C1 308 aa3.79□□□□□ -1.8
SFXN1-202ENST00000421887 C10orf99Q6UWK7 81 aa3.79□□□□□ -1.8
SFXN1-202ENST00000421887 ZNF826PQ6ZT77 177 aa3.79□□□□□ -1.8
SFXN1-202ENST00000421887 MRPL21Q7Z2W9 205 aaKnown RBP3.79□□□□□ -1.8
SFXN1-202ENST00000421887 OR2W3Q7Z3T1 314 aa3.79□□□□□ -1.8
SFXN1-202ENST00000421887 SH2D6Q7Z4S9 175 aa3.79□□□□□ -1.8
SFXN1-202ENST00000421887 LHFPL4Q7Z7J7 247 aa3.79□□□□□ -1.8
SFXN1-202ENST00000421887 MKXQ8IYA7 352 aa3.79□□□□□ -1.8
SFXN1-202ENST00000421887 OR5T2Q8NGG2 359 aa3.79□□□□□ -1.8
SFXN1-202ENST00000421887 OR8S1Q8NH09 359 aa3.79□□□□□ -1.8
SFXN1-202ENST00000421887 OR1F12Q8NHA8 337 aa3.79□□□□□ -1.8
SFXN1-202ENST00000421887 SLC7A6Q92536 515 aa3.79□□□□□ -1.8
SFXN1-202ENST00000421887 STMN2Q93045 179 aa3.79□□□□□ -1.8
SFXN1-202ENST00000421887 DUX3Q96PT4 197 aa3.79□□□□□ -1.8
SFXN1-202ENST00000421887 ATF6BQ99941 703 aa3.79□□□□□ -1.8
SFXN1-202ENST00000421887 ALG12Q9BV10 488 aa3.79□□□□□ -1.8
SFXN1-202ENST00000421887 RNPEPL1Q9HAU8 725 aa3.79□□□□□ -1.8
SFXN1-202ENST00000421887 POLE4Q9NR33 117 aa3.79□□□□□ -1.8
SFXN1-202ENST00000421887 RCC2Q9P258 522 aaKnown RBP3.79□□□□□ -1.8
SFXN1-202ENST00000421887 GAGE2DQ9UEU5 116 aa3.79□□□□□ -1.8
SFXN1-202ENST00000421887 ZNF391Q9UJN7 358 aa3.79□□□□□ -1.8
SFXN1-202ENST00000421887 RNF150Q9ULK6 438 aa3.79□□□□□ -1.8
SFXN1-202ENST00000421887 POLR1DQ9Y2S0 133 aa3.79□□□□□ -1.8
SFXN1-202ENST00000421887 TBL2Q9Y4P3 447 aaKnown RBP3.79□□□□□ -1.8
SFXN1-202ENST00000421887 DNAH1Q9P2D7 4330 aa3.78□□□□□ -1.8
SFXN1-202ENST00000421887 SAA2-SAA4A0A096LPE2 208 aa3.78□□□□□ -1.8
SFXN1-202ENST00000421887 IGLV1-36A0A0B4J1U3 117 aa3.78□□□□□ -1.8
SFXN1-202ENST00000421887 C13orf42A0A1B0GVH6 325 aa3.78□□□□□ -1.8
SFXN1-202ENST00000421887 A0A1B0GWJ7 208 aa3.78□□□□□ -1.8
SFXN1-202ENST00000421887 PRORSD1PA6NEY8 169 aa3.78□□□□□ -1.8
SFXN1-202ENST00000421887 GGT3PA6NGU5 568 aa3.78□□□□□ -1.8
SFXN1-202ENST00000421887 A6NIZ1 184 aa3.78□□□□□ -1.8
SFXN1-202ENST00000421887 FAM90A26D6RGX4 464 aa3.78□□□□□ -1.8
SFXN1-202ENST00000421887 BHLHE40O14503 412 aa3.78□□□□□ -1.8
SFXN1-202ENST00000421887 COPEO14579 308 aa3.78□□□□□ -1.8
SFXN1-202ENST00000421887 SELENOFO60613 162 aa3.78□□□□□ -1.8
SFXN1-202ENST00000421887 PLIN3O60664 434 aa3.78□□□□□ -1.8
SFXN1-202ENST00000421887 SERPINB7O75635 380 aa3.78□□□□□ -1.8
SFXN1-202ENST00000421887 RHBDL1O75783 438 aa3.78□□□□□ -1.8
SFXN1-202ENST00000421887 PGA5P0DJD9 388 aa3.78□□□□□ -1.8
SFXN1-202ENST00000421887 AQP2P41181 271 aa3.78□□□□□ -1.8
SFXN1-202ENST00000421887 CDKN2CP42773 168 aa3.78□□□□□ -1.8
SFXN1-202ENST00000421887 CAV3P56539 151 aa3.78□□□□□ -1.8
SFXN1-202ENST00000421887 GMFBP60983 142 aa3.78□□□□□ -1.8
SFXN1-202ENST00000421887 RAP1BP61224 184 aa3.78□□□□□ -1.8
SFXN1-202ENST00000421887 RAP1AP62834 184 aa3.78□□□□□ -1.8
SFXN1-202ENST00000421887 CBX1P83916 185 aa3.78□□□□□ -1.8
SFXN1-202ENST00000421887 DYNC1I2Q13409 638 aaKnown RBP3.78□□□□□ -1.8
SFXN1-202ENST00000421887 GK2Q14410 553 aaPredicted RBP3.78□□□□□ -1.8
SFXN1-202ENST00000421887 PCK2Q16822 640 aa3.78□□□□□ -1.8
SFXN1-202ENST00000421887 HCP5Q6MZN7 132 aa3.78□□□□□ -1.8
SFXN1-202ENST00000421887 C8orf74Q6P047 294 aa3.78□□□□□ -1.8
SFXN1-202ENST00000421887 TMPRSS11FQ6ZWK6 438 aa3.78□□□□□ -1.8
SFXN1-202ENST00000421887 COMMD1Q8N668 190 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms