RNA–Protein interactions for RNA: ENST00000421459.2

VIM-202, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-202ENST00000421459 ZNF329Q86UD4 541 aa6.45□□□□□ -1.38
VIM-202ENST00000421459 SLC35F2Q8IXU6 374 aa6.45□□□□□ -1.38
VIM-202ENST00000421459 RDH10Q8IZV5 341 aa6.45□□□□□ -1.38
VIM-202ENST00000421459 OR8H2Q8N162 312 aa6.45□□□□□ -1.38
VIM-202ENST00000421459 ABHD12Q8N2K0 398 aa6.45□□□□□ -1.38
VIM-202ENST00000421459 DTX3Q8N9I9 347 aa6.45□□□□□ -1.38
VIM-202ENST00000421459 ASB17Q8WXJ9 295 aa6.45□□□□□ -1.38
VIM-202ENST00000421459 EMG1Q92979 244 aaKnown RBP6.45□□□□□ -1.38
VIM-202ENST00000421459 STMN2Q93045 179 aa6.45□□□□□ -1.38
VIM-202ENST00000421459 NSL1Q96IY1 281 aa6.45□□□□□ -1.38
VIM-202ENST00000421459 SNX22Q96L94 193 aa6.45□□□□□ -1.38
VIM-202ENST00000421459 LRGUKQ96M69 825 aa6.45□□□□□ -1.38
VIM-202ENST00000421459 SLC25A33Q9BSK2 321 aa6.45□□□□□ -1.38
VIM-202ENST00000421459 CLEC7AQ9BXN2 247 aa6.45□□□□□ -1.38
VIM-202ENST00000421459 PKIBQ9C010 78 aa6.45□□□□□ -1.38
VIM-202ENST00000421459 ZNF556Q9HAH1 456 aa6.45□□□□□ -1.38
VIM-202ENST00000421459 SLC25A19Q9HC21 320 aa6.45□□□□□ -1.38
VIM-202ENST00000421459 RBFOX1Q9NWB1 397 aaKnown RBP6.45□□□□□ -1.38
VIM-202ENST00000421459 NDE1Q9NXR1 346 aa6.45□□□□□ -1.38
VIM-202ENST00000421459 ING3Q9NXR8 418 aa6.45□□□□□ -1.38
VIM-202ENST00000421459 BIRC6Q9NR09 4857 aa6.45□□□□□ -1.38
VIM-202ENST00000421459 DNAH7Q8WXX0 4024 aa6.45□□□□□ -1.38
VIM-202ENST00000421459 hADV38S2A0JD32 116 aa6.44□□□□□ -1.38
VIM-202ENST00000421459 SIRPB1O00241 398 aa6.44□□□□□ -1.38
VIM-202ENST00000421459 IGHV3-7P01780 117 aa6.44□□□□□ -1.38
VIM-202ENST00000421459 RBP4P02753 201 aa6.44□□□□□ -1.38
VIM-202ENST00000421459 BCL3P20749 454 aa6.44□□□□□ -1.38
VIM-202ENST00000421459 HTR1DP28221 377 aa6.44□□□□□ -1.38
VIM-202ENST00000421459 PEX2P28328 305 aa6.44□□□□□ -1.38
VIM-202ENST00000421459 OR3A1P47881 315 aa6.44□□□□□ -1.38
VIM-202ENST00000421459 GLIPR1P48060 266 aa6.44□□□□□ -1.38
VIM-202ENST00000421459 MNAT1P51948 309 aa6.44□□□□□ -1.38
VIM-202ENST00000421459 MEF2CQ06413 473 aaPredicted RBP6.44□□□□□ -1.38
VIM-202ENST00000421459 CD69Q07108 199 aa6.44□□□□□ -1.38
VIM-202ENST00000421459 EGFEM1PQ0D2K5 195 aa6.44□□□□□ -1.38
VIM-202ENST00000421459 PTGES3Q15185 160 aaKnown RBP6.44□□□□□ -1.38
VIM-202ENST00000421459 MINOS1Q5TGZ0 78 aa6.44□□□□□ -1.38
VIM-202ENST00000421459 AADACL4Q5VUY2 407 aa6.44□□□□□ -1.38
VIM-202ENST00000421459 Q6ZSR3 168 aa6.44□□□□□ -1.38
VIM-202ENST00000421459 TRAPPC6BQ86SZ2 158 aa6.44□□□□□ -1.38
VIM-202ENST00000421459 MRPL41Q8IXM3 137 aaKnown RBP6.44□□□□□ -1.38
VIM-202ENST00000421459 LINC00482Q8N8I6 264 aa6.44□□□□□ -1.38
VIM-202ENST00000421459 RFT1Q96AA3 541 aa6.44□□□□□ -1.38
VIM-202ENST00000421459 SLC7A6OSQ96CW6 309 aaPredicted RBP6.44□□□□□ -1.38
VIM-202ENST00000421459 RBMXL1Q96E39 390 aaKnown RBP6.44□□□□□ -1.38
VIM-202ENST00000421459 RCC1LQ96I51 464 aaKnown RBP6.44□□□□□ -1.38
VIM-202ENST00000421459 NOL4LQ96MY1 436 aaPredicted RBP6.44□□□□□ -1.38
VIM-202ENST00000421459 DUX3Q96PT4 197 aa6.44□□□□□ -1.38
VIM-202ENST00000421459 IL4I1Q96RQ9 567 aa6.44□□□□□ -1.38
VIM-202ENST00000421459 CNN2Q99439 309 aaKnown RBP6.44□□□□□ -1.38
VIM-202ENST00000421459 ZNF649Q9BS31 505 aa6.44□□□□□ -1.38
VIM-202ENST00000421459 ZNF286AQ9HBT8 521 aa6.44□□□□□ -1.38
VIM-202ENST00000421459 ADGRL4Q9HBW9 690 aa6.44□□□□□ -1.38
VIM-202ENST00000421459 DPM3Q9P2X0 92 aa6.44□□□□□ -1.38
VIM-202ENST00000421459 LINC00527Q9UJ94 153 aa6.44□□□□□ -1.38
VIM-202ENST00000421459 SLC7A11Q9UPY5 501 aa6.44□□□□□ -1.38
VIM-202ENST00000421459 SNX5Q9Y5X3 404 aa6.44□□□□□ -1.38
VIM-202ENST00000421459 LINC00312Q9Y6C7 94 aa6.44□□□□□ -1.38
VIM-202ENST00000421459 MINOS1-NBL1R4GNA1 71 aa6.44□□□□□ -1.38
VIM-202ENST00000421459 IGKV1-9A0A0C4DH69 117 aa6.43□□□□□ -1.38
VIM-202ENST00000421459 ZNF670-ZNF695F2Z2N8 137 aa6.43□□□□□ -1.38
VIM-202ENST00000421459 SYT7O43581 403 aa6.43□□□□□ -1.38
VIM-202ENST00000421459 ENTPD6O75354 484 aa6.43□□□□□ -1.38
VIM-202ENST00000421459 DNAJC8O75937 253 aaPredicted RBP6.43□□□□□ -1.38
VIM-202ENST00000421459 ALDOBP05062 364 aa6.43□□□□□ -1.38
VIM-202ENST00000421459 SNRNP70P08621 437 aaKnown RBP6.43□□□□□ -1.38
VIM-202ENST00000421459 ANXA8P13928 327 aa6.43□□□□□ -1.38
VIM-202ENST00000421459 PRKACAP17612 351 aa6.43□□□□□ -1.38
VIM-202ENST00000421459 CCL1P22362 96 aa6.43□□□□□ -1.38
VIM-202ENST00000421459 CDK2P24941 298 aa6.43□□□□□ -1.38
VIM-202ENST00000421459 AZGP1P25311 298 aaKnown RBP6.43□□□□□ -1.38
VIM-202ENST00000421459 POU3F4P49335 361 aa6.43□□□□□ -1.38
VIM-202ENST00000421459 RASSF2P50749 326 aa6.43□□□□□ -1.38
VIM-202ENST00000421459 FUT6P51993 359 aa6.43□□□□□ -1.38
VIM-202ENST00000421459 EFNB1P98172 346 aa6.43□□□□□ -1.38
VIM-202ENST00000421459 ZNF91Q05481 1191 aa6.43□□□□□ -1.38
VIM-202ENST00000421459 AESQ08117 197 aa6.43□□□□□ -1.38
VIM-202ENST00000421459 LCN1P1Q5VSP4 162 aa6.43□□□□□ -1.38
VIM-202ENST00000421459 CATSPERDQ86XM0 798 aa6.43□□□□□ -1.38
VIM-202ENST00000421459 FAM58AQ8N1B3 248 aa6.43□□□□□ -1.38
VIM-202ENST00000421459 PRSS35Q8N3Z0 413 aa6.43□□□□□ -1.38
VIM-202ENST00000421459 TCEANCQ8N8B7 351 aa6.43□□□□□ -1.38
VIM-202ENST00000421459 YIPF7Q8N8F6 280 aa6.43□□□□□ -1.38
VIM-202ENST00000421459 CAPSLQ8WWF8 208 aa6.43□□□□□ -1.38
VIM-202ENST00000421459 ASB9Q96DX5 294 aa6.43□□□□□ -1.38
VIM-202ENST00000421459 ADAT3Q96EY9 351 aaPredicted RBP6.43□□□□□ -1.38
VIM-202ENST00000421459 RBM14Q96PK6 669 aaKnown RBP6.43□□□□□ -1.38
VIM-202ENST00000421459 THTPAQ9BU02 230 aa6.43□□□□□ -1.38
VIM-202ENST00000421459 LIN7BQ9HAP6 207 aa6.43□□□□□ -1.38
VIM-202ENST00000421459 PAPOLBQ9NRJ5 636 aaKnown RBP6.43□□□□□ -1.38
VIM-202ENST00000421459 CLN6Q9NWW5 311 aa6.43□□□□□ -1.38
VIM-202ENST00000421459 DNAJB9Q9UBS3 223 aa6.43□□□□□ -1.38
VIM-202ENST00000421459 HHLA2Q9UM44 414 aa6.43□□□□□ -1.38
VIM-202ENST00000421459 TMEM14AQ9Y6G1 99 aa6.43□□□□□ -1.38
VIM-202ENST00000421459 TENM3Q9P273 2699 aa6.43□□□□□ -1.38
VIM-202ENST00000421459 HYDINQ4G0P3 5121 aa6.43□□□□□ -1.38
VIM-202ENST00000421459 IGKV1-12A0A0C4DH73 117 aa6.42□□□□□ -1.38
VIM-202ENST00000421459 A0A1W2PQL4 384 aaPredicted RBP6.42□□□□□ -1.38
VIM-202ENST00000421459 LINC01548A6NM66 108 aa6.42□□□□□ -1.38
VIM-202ENST00000421459 LY6LH3BQJ8 138 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms