RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 FCGR2CP31995 323 aa9.45□□□□□ -0.9
DDX56-203ENST00000421223 ACOT7LQ6ZUV0 252 aa9.45□□□□□ -0.9
DDX56-203ENST00000421223 CNEP1R1Q8N9A8 125 aa9.45□□□□□ -0.9
DDX56-203ENST00000421223 OR5L1Q8NGL2 311 aa9.45□□□□□ -0.9
DDX56-203ENST00000421223 NUDT16L1Q9BRJ7 211 aaKnown RBP9.45□□□□□ -0.9
DDX56-203ENST00000421223 TM2D1Q9BX74 207 aa9.45□□□□□ -0.9
DDX56-203ENST00000421223 KIAA1549Q9HCM3 1950 aa9.45□□□□□ -0.9
DDX56-203ENST00000421223 CACNA1DQ01668 2161 aa9.45□□□□□ -0.9
DDX56-203ENST00000421223 RNF222A6NCQ9 220 aa9.45□□□□□ -0.9
DDX56-203ENST00000421223 TSPAN4O14817 238 aa9.45□□□□□ -0.9
DDX56-203ENST00000421223 BET1O15155 118 aa9.45□□□□□ -0.9
DDX56-203ENST00000421223 CD8AP01732 235 aa9.45□□□□□ -0.9
DDX56-203ENST00000421223 BCL3P20749 454 aa9.45□□□□□ -0.9
DDX56-203ENST00000421223 RAB32Q13637 225 aa9.45□□□□□ -0.9
DDX56-203ENST00000421223 OR2T2Q6IF00 324 aa9.45□□□□□ -0.9
DDX56-203ENST00000421223 HAGHLQ6PII5 290 aaPredicted RBP9.45□□□□□ -0.9
DDX56-203ENST00000421223 OR6K3Q8NGY3 331 aa9.45□□□□□ -0.9
DDX56-203ENST00000421223 C10orf35Q96D05 121 aa9.45□□□□□ -0.9
DDX56-203ENST00000421223 MARS2Q96GW9 593 aaKnown RBP9.45□□□□□ -0.9
DDX56-203ENST00000421223 LINC00052Q96N35 136 aa9.45□□□□□ -0.9
DDX56-203ENST00000421223 LIME1Q9H400 295 aa9.45□□□□□ -0.9
DDX56-203ENST00000421223 FAM86C1Q9NVL1 165 aa9.45□□□□□ -0.9
DDX56-203ENST00000421223 OR5AC2Q9NZP5 309 aa9.45□□□□□ -0.9
DDX56-203ENST00000421223 OSGIN2Q9Y236 505 aa9.45□□□□□ -0.9
DDX56-203ENST00000421223 MRPS18CQ9Y3D5 142 aaKnown RBP9.45□□□□□ -0.9
DDX56-203ENST00000421223 SLC22A20A6NK97 555 aa9.45□□□□□ -0.9
DDX56-203ENST00000421223 SLC33A1O00400 549 aaPredicted RBP9.45□□□□□ -0.9
DDX56-203ENST00000421223 NUPL2O15504 423 aaKnown RBP9.45□□□□□ -0.9
DDX56-203ENST00000421223 LILRA1O75019 489 aa9.45□□□□□ -0.9
DDX56-203ENST00000421223 PTGER4P35408 488 aa9.45□□□□□ -0.9
DDX56-203ENST00000421223 NUP62P37198 522 aaPredicted RBP9.45□□□□□ -0.9
DDX56-203ENST00000421223 ALDH3B1P43353 468 aa9.45□□□□□ -0.9
DDX56-203ENST00000421223 PIGPP57054 158 aa9.45□□□□□ -0.9
DDX56-203ENST00000421223 SOX8P57073 446 aa9.45□□□□□ -0.9
DDX56-203ENST00000421223 CLEC9AQ6UXN8 241 aa9.45□□□□□ -0.9
DDX56-203ENST00000421223 SGPP2Q8IWX5 399 aa9.45□□□□□ -0.9
DDX56-203ENST00000421223 SMIM3Q9BZL3 60 aa9.45□□□□□ -0.9
DDX56-203ENST00000421223 ZNF552Q9H707 407 aaPredicted RBP9.45□□□□□ -0.9
DDX56-203ENST00000421223 LSM5Q9Y4Y9 91 aaKnown RBP9.45□□□□□ -0.9
DDX56-203ENST00000421223 A8MXK9 166 aa9.44□□□□□ -0.9
DDX56-203ENST00000421223 H0YIZ8 118 aa9.44□□□□□ -0.9
DDX56-203ENST00000421223 LINC01387J3KSC0 135 aa9.44□□□□□ -0.9
DDX56-203ENST00000421223 HS3ST1O14792 307 aa9.44□□□□□ -0.9
DDX56-203ENST00000421223 NME2P1O60361 137 aa9.44□□□□□ -0.9
DDX56-203ENST00000421223 LYZL6O75951 148 aa9.44□□□□□ -0.9
DDX56-203ENST00000421223 FCGR3AP08637 254 aa9.44□□□□□ -0.9
DDX56-203ENST00000421223 HOXD4P09016 255 aaPredicted RBP9.44□□□□□ -0.9
DDX56-203ENST00000421223 NME2P22392 152 aa9.44□□□□□ -0.9
DDX56-203ENST00000421223 CHATP28329 748 aa9.44□□□□□ -0.9
DDX56-203ENST00000421223 APLNRP35414 380 aa9.44□□□□□ -0.9
DDX56-203ENST00000421223 NOVA1P51513 510 aaKnown RBP9.44□□□□□ -0.9
DDX56-203ENST00000421223 AKR1C2P52895 323 aa9.44□□□□□ -0.9
DDX56-203ENST00000421223 AKR1C1Q04828 323 aa9.44□□□□□ -0.9
DDX56-203ENST00000421223 SRSF4Q08170 494 aaKnown RBP9.44□□□□□ -0.9
DDX56-203ENST00000421223 CLN3Q13286 438 aa9.44□□□□□ -0.9
DDX56-203ENST00000421223 ARL6IP1Q15041 203 aa9.44□□□□□ -0.9
DDX56-203ENST00000421223 IAH1Q2TAA2 248 aaPredicted RBP9.44□□□□□ -0.9
DDX56-203ENST00000421223 SPIN3Q5JUX0 258 aa9.44□□□□□ -0.9
DDX56-203ENST00000421223 FAHD2BQ6P2I3 314 aaPredicted RBP9.44□□□□□ -0.9
DDX56-203ENST00000421223 C17orf78Q8N4C9 275 aa9.44□□□□□ -0.9
DDX56-203ENST00000421223 OR11L1Q8NGX0 322 aa9.44□□□□□ -0.9
DDX56-203ENST00000421223 FAHD2AQ96GK7 314 aa9.44□□□□□ -0.9
DDX56-203ENST00000421223 SPRR3Q9UBC9 169 aa9.44□□□□□ -0.9
DDX56-203ENST00000421223 NBEAQ8NFP9 2946 aa9.44□□□□□ -0.9
DDX56-203ENST00000421223 MSGN1A6NI15 193 aa9.44□□□□□ -0.9
DDX56-203ENST00000421223 FOXI3A8MTJ6 420 aaPredicted RBP9.44□□□□□ -0.9
DDX56-203ENST00000421223 TERTO14746 1132 aaKnown RBP9.44□□□□□ -0.9
DDX56-203ENST00000421223 MSTNO14793 375 aa9.44□□□□□ -0.9
DDX56-203ENST00000421223 FTH1P19P0C7X4 201 aa9.44□□□□□ -0.9
DDX56-203ENST00000421223 ZNF728P0DKX0 622 aa9.44□□□□□ -0.9
DDX56-203ENST00000421223 IDH3GP51553 393 aaPredicted RBP9.44□□□□□ -0.9
DDX56-203ENST00000421223 MEX3BQ6ZN04 569 aaKnown RBP9.44□□□□□ -0.9
DDX56-203ENST00000421223 KCNRGQ8N5I3 272 aa9.44□□□□□ -0.9
DDX56-203ENST00000421223 FDCSPQ8NFU4 85 aa9.44□□□□□ -0.9
DDX56-203ENST00000421223 RDH5Q92781 318 aa9.44□□□□□ -0.9
DDX56-203ENST00000421223 RRNAD1Q96FB5 475 aaKnown RBP9.44□□□□□ -0.9
DDX56-203ENST00000421223 C1QTNF5Q9BXJ0 243 aa9.44□□□□□ -0.9
DDX56-203ENST00000421223 RGCCQ9H4X1 137 aa9.44□□□□□ -0.9
DDX56-203ENST00000421223 TAS2R3Q9NYW6 316 aa9.44□□□□□ -0.9
DDX56-203ENST00000421223 SESN1Q9Y6P5 492 aa9.44□□□□□ -0.9
DDX56-203ENST00000421223 KIAA2026Q5HYC2 2103 aa9.44□□□□□ -0.9
DDX56-203ENST00000421223 SYNGR1O43759 233 aa9.43□□□□□ -0.9
DDX56-203ENST00000421223 OR2F2O95006 317 aa9.43□□□□□ -0.9
DDX56-203ENST00000421223 IFNA2P01563 188 aa9.43□□□□□ -0.9
DDX56-203ENST00000421223 CA6P23280 308 aa9.43□□□□□ -0.9
DDX56-203ENST00000421223 MPZP25189 248 aa9.43□□□□□ -0.9
DDX56-203ENST00000421223 OR2F1Q13607 317 aa9.43□□□□□ -0.9
DDX56-203ENST00000421223 TUSC1Q2TAM9 212 aa9.43□□□□□ -0.9
DDX56-203ENST00000421223 SHEQ5VZ18 495 aa9.43□□□□□ -0.9
DDX56-203ENST00000421223 TMEM185AQ8NFB2 350 aa9.43□□□□□ -0.9
DDX56-203ENST00000421223 OR1S1Q8NH92 325 aa9.43□□□□□ -0.9
DDX56-203ENST00000421223 UBALD1Q8TB05 177 aa9.43□□□□□ -0.9
DDX56-203ENST00000421223 TMEM45BQ96B21 275 aa9.43□□□□□ -0.9
DDX56-203ENST00000421223 TRIB1Q96RU8 372 aa9.43□□□□□ -0.9
DDX56-203ENST00000421223 MS4A7Q9GZW8 240 aaPredicted RBP9.43□□□□□ -0.9
DDX56-203ENST00000421223 PARD6AQ9NPB6 346 aa9.43□□□□□ -0.9
DDX56-203ENST00000421223 NECAP2Q9NVZ3 263 aa9.43□□□□□ -0.9
DDX56-203ENST00000421223 IGKV3D-15A0A087WSY6 115 aa9.43□□□□□ -0.9
DDX56-203ENST00000421223 BCL2L11O43521 198 aa9.43□□□□□ -0.9
DDX56-203ENST00000421223 FGF2P09038 288 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms