RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 NUDT16L1Q9BRJ7 211 aaKnown RBP7.56□□□□□ -1.2
SNCA-206ENST00000420646 DLL3Q9NYJ7 618 aa7.56□□□□□ -1.2
SNCA-206ENST00000420646 GSKIPQ9P0R6 139 aa7.56□□□□□ -1.2
SNCA-206ENST00000420646 ANXA10Q9UJ72 324 aa7.56□□□□□ -1.2
SNCA-206ENST00000420646 FZR1Q9UM11 496 aa7.56□□□□□ -1.2
SNCA-206ENST00000420646 ANAPC10Q9UM13 185 aa7.56□□□□□ -1.2
SNCA-206ENST00000420646 OSGIN2Q9Y236 505 aa7.56□□□□□ -1.2
SNCA-206ENST00000420646 TRAV39A0A0B4J263 110 aa7.55□□□□□ -1.2
SNCA-206ENST00000420646 IL2RAP01589 272 aa7.55□□□□□ -1.2
SNCA-206ENST00000420646 RLN2P04090 185 aa7.55□□□□□ -1.2
SNCA-206ENST00000420646 FCGR3AP08637 254 aa7.55□□□□□ -1.2
SNCA-206ENST00000420646 TMEM128Q5BJH2 165 aa7.55□□□□□ -1.2
SNCA-206ENST00000420646 IGSF11Q5DX21 431 aa7.55□□□□□ -1.2
SNCA-206ENST00000420646 SLC22A25Q6T423 547 aa7.55□□□□□ -1.2
SNCA-206ENST00000420646 LHFPL1Q86WI0 220 aa7.55□□□□□ -1.2
SNCA-206ENST00000420646 RPRMLQ8N4K4 120 aa7.55□□□□□ -1.2
SNCA-206ENST00000420646 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.55□□□□□ -1.2
SNCA-206ENST00000420646 C9orf106Q8NAJ2 232 aa7.55□□□□□ -1.2
SNCA-206ENST00000420646 UBALD1Q8TB05 177 aa7.55□□□□□ -1.2
SNCA-206ENST00000420646 BCL2L2Q92843 193 aaPredicted RBP7.55□□□□□ -1.2
SNCA-206ENST00000420646 CXorf58Q96LI9 332 aa7.55□□□□□ -1.2
SNCA-206ENST00000420646 ASH1LQ9NR48 2969 aaKnown RBP7.55□□□□□ -1.2
SNCA-206ENST00000420646 UBQLN2Q9UHD9 624 aa7.55□□□□□ -1.2
SNCA-206ENST00000420646 MEX3AA1L020 520 aaKnown RBP7.55□□□□□ -1.2
SNCA-206ENST00000420646 RFPL4AA6NLU0 287 aa7.55□□□□□ -1.2
SNCA-206ENST00000420646 RFPL4AL1F8VTS6 287 aa7.55□□□□□ -1.2
SNCA-206ENST00000420646 HS3ST1O14792 307 aa7.55□□□□□ -1.2
SNCA-206ENST00000420646 DUS4LO95620 317 aaKnown RBP7.55□□□□□ -1.2
SNCA-206ENST00000420646 ZNF250P15622 560 aa7.55□□□□□ -1.2
SNCA-206ENST00000420646 MPGP29372 298 aa7.55□□□□□ -1.2
SNCA-206ENST00000420646 APLNRP35414 380 aa7.55□□□□□ -1.2
SNCA-206ENST00000420646 MALLQ13021 153 aa7.55□□□□□ -1.2
SNCA-206ENST00000420646 STK11Q15831 433 aa7.55□□□□□ -1.2
SNCA-206ENST00000420646 PHLDA2Q53GA4 152 aa7.55□□□□□ -1.2
SNCA-206ENST00000420646 ZNF585AQ6P3V2 769 aa7.55□□□□□ -1.2
SNCA-206ENST00000420646 ARRDC1Q8N5I2 433 aa7.55□□□□□ -1.2
SNCA-206ENST00000420646 OR11L1Q8NGX0 322 aa7.55□□□□□ -1.2
SNCA-206ENST00000420646 APOBEC3DQ96AK3 386 aaPredicted RBP7.55□□□□□ -1.2
SNCA-206ENST00000420646 OR2J1Q9GZK6 312 aa7.55□□□□□ -1.2
SNCA-206ENST00000420646 RGCCQ9H4X1 137 aa7.55□□□□□ -1.2
SNCA-206ENST00000420646 MBD2Q9UBB5 411 aa7.55□□□□□ -1.2
SNCA-206ENST00000420646 KCNMB2Q9Y691 235 aa7.55□□□□□ -1.2
SNCA-206ENST00000420646 IFNA7P01567 189 aa7.54□□□□□ -1.2
SNCA-206ENST00000420646 PTGER4P35408 488 aa7.54□□□□□ -1.2
SNCA-206ENST00000420646 NBL1P41271 181 aa7.54□□□□□ -1.2
SNCA-206ENST00000420646 RBM11P57052 281 aaKnown RBP7.54□□□□□ -1.2
SNCA-206ENST00000420646 DHODHQ02127 395 aa7.54□□□□□ -1.2
SNCA-206ENST00000420646 UNQ6126/PRO20091Q6UXV3 157 aa7.54□□□□□ -1.2
SNCA-206ENST00000420646 BOLLQ8N9W6 283 aaKnown RBP7.54□□□□□ -1.2
SNCA-206ENST00000420646 COQ3Q9NZJ6 369 aa7.54□□□□□ -1.2
SNCA-206ENST00000420646 MAB21L2Q9Y586 359 aa7.54□□□□□ -1.2
SNCA-206ENST00000420646 PTPRBP23467 1997 aa7.54□□□□□ -1.2
SNCA-206ENST00000420646 SVEP1Q4LDE5 3571 aa7.54□□□□□ -1.2
SNCA-206ENST00000420646 PQLC2LA1A4F0 135 aa7.54□□□□□ -1.2
SNCA-206ENST00000420646 H0YIZ8 118 aa7.54□□□□□ -1.2
SNCA-206ENST00000420646 SCO1O75880 301 aa7.54□□□□□ -1.2
SNCA-206ENST00000420646 RPS2P15880 293 aaKnown RBP7.54□□□□□ -1.2
SNCA-206ENST00000420646 TBPP20226 339 aa7.54□□□□□ -1.2
SNCA-206ENST00000420646 MPZP25189 248 aa7.54□□□□□ -1.2
SNCA-206ENST00000420646 GSG1LQ6UXU4 331 aa7.54□□□□□ -1.2
SNCA-206ENST00000420646 TMEM200AQ86VY9 491 aa7.54□□□□□ -1.2
SNCA-206ENST00000420646 CXorf67Q86X51 503 aaPredicted RBP7.54□□□□□ -1.2
SNCA-206ENST00000420646 ZDHHC23Q8IYP9 409 aa7.54□□□□□ -1.2
SNCA-206ENST00000420646 RDH5Q92781 318 aa7.54□□□□□ -1.2
SNCA-206ENST00000420646 METTL8Q9H825 291 aaKnown RBP7.54□□□□□ -1.2
SNCA-206ENST00000420646 MYOZ1Q9NP98 299 aaPredicted RBP7.54□□□□□ -1.2
SNCA-206ENST00000420646 SPEF1Q9Y4P9 236 aa7.54□□□□□ -1.2
SNCA-206ENST00000420646 HEATR1Q9H583 2144 aaKnown RBP7.54□□□□□ -1.2
SNCA-206ENST00000420646 NAV2Q8IVL1 2488 aa7.54□□□□□ -1.2
SNCA-206ENST00000420646 HMSDA8MTL9 139 aa7.54□□□□□ -1.2
SNCA-206ENST00000420646 KLK10O43240 276 aa7.54□□□□□ -1.2
SNCA-206ENST00000420646 TFF1P04155 84 aa7.54□□□□□ -1.2
SNCA-206ENST00000420646 FCGR2CP31995 323 aa7.54□□□□□ -1.2
SNCA-206ENST00000420646 ARR3P36575 388 aa7.54□□□□□ -1.2
SNCA-206ENST00000420646 TAS2R46P59540 309 aa7.54□□□□□ -1.2
SNCA-206ENST00000420646 MPPED2Q15777 294 aa7.54□□□□□ -1.2
SNCA-206ENST00000420646 NRN1LQ496H8 165 aa7.54□□□□□ -1.2
SNCA-206ENST00000420646 NHLRC3Q5JS37 347 aa7.54□□□□□ -1.2
SNCA-206ENST00000420646 ZNF660Q6AZW8 331 aaPredicted RBP7.54□□□□□ -1.2
SNCA-206ENST00000420646 C11orf87Q6NUJ2 197 aa7.54□□□□□ -1.2
SNCA-206ENST00000420646 TFAP2EQ6VUC0 442 aa7.54□□□□□ -1.2
SNCA-206ENST00000420646 ASCL4Q6XD76 172 aa7.54□□□□□ -1.2
SNCA-206ENST00000420646 NEK7Q8TDX7 302 aa7.54□□□□□ -1.2
SNCA-206ENST00000420646 RRNAD1Q96FB5 475 aaKnown RBP7.54□□□□□ -1.2
SNCA-206ENST00000420646 VRK1Q99986 396 aaPredicted RBP7.54□□□□□ -1.2
SNCA-206ENST00000420646 GSX2Q9BZM3 304 aa7.54□□□□□ -1.2
SNCA-206ENST00000420646 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.54□□□□□ -1.2
SNCA-206ENST00000420646 COMMD9Q9P000 198 aa7.54□□□□□ -1.2
SNCA-206ENST00000420646 SETXQ7Z333 2677 aaKnown RBP7.54□□□□□ -1.2
SNCA-206ENST00000420646 RNF222A6NCQ9 220 aa7.53□□□□□ -1.2
SNCA-206ENST00000420646 H0YL77 283 aa7.53□□□□□ -1.2
SNCA-206ENST00000420646 BET1O15155 118 aa7.53□□□□□ -1.2
SNCA-206ENST00000420646 RP2O75695 350 aa7.53□□□□□ -1.2
SNCA-206ENST00000420646 SFT2D2O95562 160 aa7.53□□□□□ -1.2
SNCA-206ENST00000420646 PRKACAP17612 351 aa7.53□□□□□ -1.2
SNCA-206ENST00000420646 FPR2P25090 351 aa7.53□□□□□ -1.2
SNCA-206ENST00000420646 KIR2DL2P43627 348 aaPredicted RBP7.53□□□□□ -1.2
SNCA-206ENST00000420646 IKZF1Q13422 519 aa7.53□□□□□ -1.2
SNCA-206ENST00000420646 CEACAM21Q3KPI0 293 aa7.53□□□□□ -1.2
SNCA-206ENST00000420646 NSUN5P2Q63ZY6 315 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms