RNA–Protein interactions for RNA: ENST00000420503.1

LINC00339-203, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-203ENST00000420503 MINOS1Q5TGZ0 78 aa10.23□□□□□ -0.77
LINC00339-203ENST00000420503 SLC25A26Q70HW3 274 aa10.23□□□□□ -0.77
LINC00339-203ENST00000420503 SPATA24Q86W54 205 aa10.23□□□□□ -0.77
LINC00339-203ENST00000420503 ELMOD2Q8IZ81 293 aa10.23□□□□□ -0.77
LINC00339-203ENST00000420503 CEP19Q96LK0 163 aa10.23□□□□□ -0.77
LINC00339-203ENST00000420503 B9D2Q9BPU9 175 aa10.23□□□□□ -0.77
LINC00339-203ENST00000420503 ZNF649Q9BS31 505 aa10.23□□□□□ -0.77
LINC00339-203ENST00000420503 CLEC7AQ9BXN2 247 aa10.23□□□□□ -0.77
LINC00339-203ENST00000420503 OR52A1Q9UKL2 312 aa10.23□□□□□ -0.77
LINC00339-203ENST00000420503 R4GMQ9 66 aa10.23□□□□□ -0.77
LINC00339-203ENST00000420503 MINOS1-NBL1R4GNA1 71 aa10.23□□□□□ -0.77
LINC00339-203ENST00000420503 TENM2Q9NT68 2774 aa10.23□□□□□ -0.77
LINC00339-203ENST00000420503 ARRDC5A6NEK1 342 aa10.22□□□□□ -0.77
LINC00339-203ENST00000420503 ACOD1A6NK06 481 aa10.22□□□□□ -0.77
LINC00339-203ENST00000420503 DLGAP1O14490 977 aa10.22□□□□□ -0.77
LINC00339-203ENST00000420503 RPP14O95059 124 aaKnown RBP10.22□□□□□ -0.77
LINC00339-203ENST00000420503 APOL3O95236 402 aa10.22□□□□□ -0.77
LINC00339-203ENST00000420503 HAND1O96004 215 aa10.22□□□□□ -0.77
LINC00339-203ENST00000420503 RBP4P02753 201 aa10.22□□□□□ -0.77
LINC00339-203ENST00000420503 HMGN1P05114 100 aa10.22□□□□□ -0.77
LINC00339-203ENST00000420503 SNRNP70P08621 437 aaKnown RBP10.22□□□□□ -0.77
LINC00339-203ENST00000420503 GABRR1P24046 479 aa10.22□□□□□ -0.77
LINC00339-203ENST00000420503 OR3A1P47881 315 aa10.22□□□□□ -0.77
LINC00339-203ENST00000420503 GRK1Q15835 563 aa10.22□□□□□ -0.77
LINC00339-203ENST00000420503 SNAPC1Q16533 368 aa10.22□□□□□ -0.77
LINC00339-203ENST00000420503 KCTD18Q6PI47 426 aaPredicted RBP10.22□□□□□ -0.77
LINC00339-203ENST00000420503 DEGS2Q6QHC5 323 aa10.22□□□□□ -0.77
LINC00339-203ENST00000420503 ZNF322Q6U7Q0 402 aaPredicted RBP10.22□□□□□ -0.77
LINC00339-203ENST00000420503 C8orf86Q6ZUL3 223 aa10.22□□□□□ -0.77
LINC00339-203ENST00000420503 DTX3Q8N9I9 347 aa10.22□□□□□ -0.77
LINC00339-203ENST00000420503 RBMXL1Q96E39 390 aaKnown RBP10.22□□□□□ -0.77
LINC00339-203ENST00000420503 NOL4LQ96MY1 436 aaPredicted RBP10.22□□□□□ -0.77
LINC00339-203ENST00000420503 TBX5Q99593 518 aa10.22□□□□□ -0.77
LINC00339-203ENST00000420503 PKIBQ9C010 78 aa10.22□□□□□ -0.77
LINC00339-203ENST00000420503 ZNF286AQ9HBT8 521 aa10.22□□□□□ -0.77
LINC00339-203ENST00000420503 SLC25A19Q9HC21 320 aa10.22□□□□□ -0.77
LINC00339-203ENST00000420503 ING3Q9NXR8 418 aa10.22□□□□□ -0.77
LINC00339-203ENST00000420503 GAR1Q9NY12 217 aaKnown RBP10.22□□□□□ -0.77
LINC00339-203ENST00000420503 LINC00527Q9UJ94 153 aa10.22□□□□□ -0.77
LINC00339-203ENST00000420503 SACSQ9NZJ4 4579 aa10.21□□□□□ -0.77
LINC00339-203ENST00000420503 hADV38S2A0JD32 116 aa10.21□□□□□ -0.77
LINC00339-203ENST00000420503 SIRPB1O00241 398 aa10.21□□□□□ -0.77
LINC00339-203ENST00000420503 FKBP6O75344 327 aa10.21□□□□□ -0.77
LINC00339-203ENST00000420503 ALDOBP05062 364 aa10.21□□□□□ -0.77
LINC00339-203ENST00000420503 BCL3P20749 454 aa10.21□□□□□ -0.77
LINC00339-203ENST00000420503 HTR1DP28221 377 aa10.21□□□□□ -0.77
LINC00339-203ENST00000420503 EPHA2P29317 976 aa10.21□□□□□ -0.77
LINC00339-203ENST00000420503 ZNF91Q05481 1191 aa10.21□□□□□ -0.77
LINC00339-203ENST00000420503 GABPB1Q06547 395 aaPredicted RBP10.21□□□□□ -0.77
LINC00339-203ENST00000420503 NKAPLQ5M9Q1 402 aa10.21□□□□□ -0.77
LINC00339-203ENST00000420503 C1orf146Q5VVC0 180 aa10.21□□□□□ -0.77
LINC00339-203ENST00000420503 EGFL6Q8IUX8 553 aa10.21□□□□□ -0.77
LINC00339-203ENST00000420503 SLC35F2Q8IXU6 374 aa10.21□□□□□ -0.77
LINC00339-203ENST00000420503 ABHD12Q8N2K0 398 aa10.21□□□□□ -0.77
LINC00339-203ENST00000420503 OR4X2Q8NGF9 303 aa10.21□□□□□ -0.77
LINC00339-203ENST00000420503 EMG1Q92979 244 aaKnown RBP10.21□□□□□ -0.77
LINC00339-203ENST00000420503 SNX22Q96L94 193 aa10.21□□□□□ -0.77
LINC00339-203ENST00000420503 CNN2Q99439 309 aaKnown RBP10.21□□□□□ -0.77
LINC00339-203ENST00000420503 LIN7BQ9HAP6 207 aa10.21□□□□□ -0.77
LINC00339-203ENST00000420503 ADGRL4Q9HBW9 690 aa10.21□□□□□ -0.77
LINC00339-203ENST00000420503 LINC00312Q9Y6C7 94 aa10.21□□□□□ -0.77
LINC00339-203ENST00000420503 EPPK1P58107 5090 aaKnown RBP10.2□□□□□ -0.78
LINC00339-203ENST00000420503 MITFO75030 526 aaPredicted RBP10.2□□□□□ -0.78
LINC00339-203ENST00000420503 ZNF254O75437 659 aa10.2□□□□□ -0.78
LINC00339-203ENST00000420503 IGHV3-7P01780 117 aa10.2□□□□□ -0.78
LINC00339-203ENST00000420503 CCL1P22362 96 aa10.2□□□□□ -0.78
LINC00339-203ENST00000420503 CDK2P24941 298 aa10.2□□□□□ -0.78
LINC00339-203ENST00000420503 AZGP1P25311 298 aaKnown RBP10.2□□□□□ -0.78
LINC00339-203ENST00000420503 MEF2CQ06413 473 aaPredicted RBP10.2□□□□□ -0.78
LINC00339-203ENST00000420503 GK3PQ14409 553 aa10.2□□□□□ -0.78
LINC00339-203ENST00000420503 Q6ZSR3 168 aa10.2□□□□□ -0.78
LINC00339-203ENST00000420503 TRAPPC6BQ86SZ2 158 aa10.2□□□□□ -0.78
LINC00339-203ENST00000420503 RDH10Q8IZV5 341 aa10.2□□□□□ -0.78
LINC00339-203ENST00000420503 TFAP2CQ92754 450 aa10.2□□□□□ -0.78
LINC00339-203ENST00000420503 RBM14Q96PK6 669 aaKnown RBP10.2□□□□□ -0.78
LINC00339-203ENST00000420503 DPM3Q9P2X0 92 aa10.2□□□□□ -0.78
LINC00339-203ENST00000420503 HHLA2Q9UM44 414 aa10.2□□□□□ -0.78
LINC00339-203ENST00000420503 IGKV1-9A0A0C4DH69 117 aa10.19□□□□□ -0.78
LINC00339-203ENST00000420503 IGKV1-12A0A0C4DH73 117 aa10.19□□□□□ -0.78
LINC00339-203ENST00000420503 ENTPD6O75354 484 aa10.19□□□□□ -0.78
LINC00339-203ENST00000420503 E2F6O75461 281 aa10.19□□□□□ -0.78
LINC00339-203ENST00000420503 CIB2O75838 187 aa10.19□□□□□ -0.78
LINC00339-203ENST00000420503 OR2F2O95006 317 aa10.19□□□□□ -0.78
LINC00339-203ENST00000420503 IGKV1D-12P01611 117 aa10.19□□□□□ -0.78
LINC00339-203ENST00000420503 IGLV1-47P01700 117 aa10.19□□□□□ -0.78
LINC00339-203ENST00000420503 GLIPR1P48060 266 aa10.19□□□□□ -0.78
LINC00339-203ENST00000420503 POU3F4P49335 361 aa10.19□□□□□ -0.78
LINC00339-203ENST00000420503 THBS3P49746 956 aa10.19□□□□□ -0.78
LINC00339-203ENST00000420503 LUMP51884 338 aaPredicted RBP10.19□□□□□ -0.78
LINC00339-203ENST00000420503 P2RX3P56373 397 aa10.19□□□□□ -0.78
LINC00339-203ENST00000420503 ACTR3P61158 418 aa10.19□□□□□ -0.78
LINC00339-203ENST00000420503 RPL23AP62750 156 aaKnown RBP10.19□□□□□ -0.78
LINC00339-203ENST00000420503 DIAPH2-AS1Q14236 149 aa10.19□□□□□ -0.78
LINC00339-203ENST00000420503 LCNL1Q6ZST4 164 aa10.19□□□□□ -0.78
LINC00339-203ENST00000420503 OR2W3Q7Z3T1 314 aa10.19□□□□□ -0.78
LINC00339-203ENST00000420503 OSR2Q8N2R0 312 aa10.19□□□□□ -0.78
LINC00339-203ENST00000420503 ASB17Q8WXJ9 295 aa10.19□□□□□ -0.78
LINC00339-203ENST00000420503 STMN2Q93045 179 aa10.19□□□□□ -0.78
LINC00339-203ENST00000420503 RFT1Q96AA3 541 aa10.19□□□□□ -0.78
LINC00339-203ENST00000420503 PRR25Q96S07 402 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms