RNA–Protein interactions for RNA: ENST00000420377.6

PTPN22-202, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN22, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-202ENST00000420377 NKX3-1Q99801 234 aaPredicted RBP3.6□□□□□ -1.83
PTPN22-202ENST00000420377 CDCA4Q9BXL8 241 aa3.6□□□□□ -1.83
PTPN22-202ENST00000420377 PPDPFQ9H3Y8 114 aa3.6□□□□□ -1.83
PTPN22-202ENST00000420377 PLK3Q9H4B4 646 aa3.6□□□□□ -1.83
PTPN22-202ENST00000420377 ZDHHC11Q9H8X9 412 aa3.6□□□□□ -1.83
PTPN22-202ENST00000420377 APOBEC3GQ9HC16 384 aaKnown RBP3.6□□□□□ -1.83
PTPN22-202ENST00000420377 PRSS16Q9NQE7 514 aa3.6□□□□□ -1.83
PTPN22-202ENST00000420377 MRPS18AQ9NVS2 196 aaKnown RBP3.6□□□□□ -1.83
PTPN22-202ENST00000420377 SIGLEC9Q9Y336 463 aa3.6□□□□□ -1.83
PTPN22-202ENST00000420377 CFAP20Q9Y6A4 193 aaKnown RBP3.6□□□□□ -1.83
PTPN22-202ENST00000420377 NYNRINQ9P2P1 1898 aaKnown RBP3.6□□□□□ -1.83
PTPN22-202ENST00000420377 TRIP11Q15643 1979 aa3.59□□□□□ -1.83
PTPN22-202ENST00000420377 NME4O00746 187 aa3.59□□□□□ -1.83
PTPN22-202ENST00000420377 SLC31A1O15431 190 aa3.59□□□□□ -1.83
PTPN22-202ENST00000420377 CDRT1O95170 752 aa3.59□□□□□ -1.83
PTPN22-202ENST00000420377 HAND1O96004 215 aa3.59□□□□□ -1.83
PTPN22-202ENST00000420377 ESR1P03372 595 aa3.59□□□□□ -1.83
PTPN22-202ENST00000420377 IL5P05113 134 aa3.59□□□□□ -1.83
PTPN22-202ENST00000420377 CHRM4P08173 479 aa3.59□□□□□ -1.83
PTPN22-202ENST00000420377 MMP7P09237 267 aaPredicted RBP3.59□□□□□ -1.83
PTPN22-202ENST00000420377 CT45A8P0DMV1 189 aa3.59□□□□□ -1.83
PTPN22-202ENST00000420377 CT45A9P0DMV2 189 aa3.59□□□□□ -1.83
PTPN22-202ENST00000420377 ARRB2P32121 409 aa3.59□□□□□ -1.83
PTPN22-202ENST00000420377 GABRA3P34903 492 aa3.59□□□□□ -1.83
PTPN22-202ENST00000420377 CNN1P51911 297 aaKnown RBP3.59□□□□□ -1.83
PTPN22-202ENST00000420377 FOXG1P55316 489 aaPredicted RBP3.59□□□□□ -1.83
PTPN22-202ENST00000420377 TCTAP57738 103 aa3.59□□□□□ -1.83
PTPN22-202ENST00000420377 TIRAPP58753 221 aa3.59□□□□□ -1.83
PTPN22-202ENST00000420377 MMDQ15546 238 aa3.59□□□□□ -1.83
PTPN22-202ENST00000420377 SMN1Q16637 294 aaKnown RBP3.59□□□□□ -1.83
PTPN22-202ENST00000420377 CT45A2Q5DJT8 189 aa3.59□□□□□ -1.83
PTPN22-202ENST00000420377 TMEM78Q5T7P6 136 aa3.59□□□□□ -1.83
PTPN22-202ENST00000420377 TMEM211Q6ICI0 200 aa3.59□□□□□ -1.83
PTPN22-202ENST00000420377 ZNF730Q6ZMV8 503 aa3.59□□□□□ -1.83
PTPN22-202ENST00000420377 OR10G4Q8NGN3 311 aa3.59□□□□□ -1.83
PTPN22-202ENST00000420377 OR13G1Q8NGZ3 307 aa3.59□□□□□ -1.83
PTPN22-202ENST00000420377 NEU4Q8WWR8 484 aaPredicted RBP3.59□□□□□ -1.83
PTPN22-202ENST00000420377 ZNF75AQ96N20 296 aa3.59□□□□□ -1.83
PTPN22-202ENST00000420377 TSPAN32Q96QS1 320 aa3.59□□□□□ -1.83
PTPN22-202ENST00000420377 RAB40CQ96S21 281 aa3.59□□□□□ -1.83
PTPN22-202ENST00000420377 C1orf43Q9BWL3 253 aa3.59□□□□□ -1.83
PTPN22-202ENST00000420377 SLC39A8Q9C0K1 460 aa3.59□□□□□ -1.83
PTPN22-202ENST00000420377 CDIP1Q9H305 208 aa3.59□□□□□ -1.83
PTPN22-202ENST00000420377 TMEM231Q9H6L2 316 aa3.59□□□□□ -1.83
PTPN22-202ENST00000420377 A4GALTQ9NPC4 353 aa3.59□□□□□ -1.83
PTPN22-202ENST00000420377 MEPEQ9NQ76 525 aaPredicted RBP3.59□□□□□ -1.83
PTPN22-202ENST00000420377 UQCR10Q9UDW1 63 aa3.59□□□□□ -1.83
PTPN22-202ENST00000420377 ZNF107Q9UII5 783 aaPredicted RBP3.59□□□□□ -1.83
PTPN22-202ENST00000420377 MCTS1Q9ULC4 181 aaKnown RBP3.59□□□□□ -1.83
PTPN22-202ENST00000420377 BOKQ9UMX3 212 aaPredicted RBP3.59□□□□□ -1.83
PTPN22-202ENST00000420377 WIPI2Q9Y4P8 454 aa3.59□□□□□ -1.83
PTPN22-202ENST00000420377 ZNF106Q9H2Y7 1883 aaKnown RBP3.59□□□□□ -1.83
PTPN22-202ENST00000420377 LOC102724200A0A096LPH7 203 aaPredicted RBP3.59□□□□□ -1.83
PTPN22-202ENST00000420377 KLF18A0A0U1RQI7 1052 aa3.59□□□□□ -1.83
PTPN22-202ENST00000420377 GABRPO00591 440 aa3.59□□□□□ -1.83
PTPN22-202ENST00000420377 DEGS1O15121 323 aa3.59□□□□□ -1.83
PTPN22-202ENST00000420377 TIMM8AO60220 97 aaPredicted RBP3.59□□□□□ -1.83
PTPN22-202ENST00000420377 HPXP02790 462 aa3.59□□□□□ -1.83
PTPN22-202ENST00000420377 MAS1P04201 325 aa3.59□□□□□ -1.83
PTPN22-202ENST00000420377 C8orf88P0DMB2 117 aa3.59□□□□□ -1.83
PTPN22-202ENST00000420377 GNB3P16520 340 aa3.59□□□□□ -1.83
PTPN22-202ENST00000420377 ATP6V0CP27449 155 aa3.59□□□□□ -1.83
PTPN22-202ENST00000420377 FCGR2BP31994 310 aaPredicted RBP3.59□□□□□ -1.83
PTPN22-202ENST00000420377 SOX3P41225 446 aa3.59□□□□□ -1.83
PTPN22-202ENST00000420377 UQCRFS1P47985 274 aa3.59□□□□□ -1.83
PTPN22-202ENST00000420377 MARCKSL1P49006 195 aa3.59□□□□□ -1.83
PTPN22-202ENST00000420377 GNG4P50150 75 aa3.59□□□□□ -1.83
PTPN22-202ENST00000420377 RPL7AP62424 266 aaKnown RBP3.59□□□□□ -1.83
PTPN22-202ENST00000420377 PPP1R8Q12972 351 aaKnown RBP3.59□□□□□ -1.83
PTPN22-202ENST00000420377 TDRG1Q3Y452 100 aa3.59□□□□□ -1.83
PTPN22-202ENST00000420377 CPTPQ5TA50 214 aa3.59□□□□□ -1.83
PTPN22-202ENST00000420377 ZNF787Q6DD87 383 aa3.59□□□□□ -1.83
PTPN22-202ENST00000420377 MEPCEQ7L2J0 689 aaKnown RBP3.59□□□□□ -1.83
PTPN22-202ENST00000420377 GPSM1Q86YR5 675 aa3.59□□□□□ -1.83
PTPN22-202ENST00000420377 ACVR1CQ8NER5 493 aa3.59□□□□□ -1.83
PTPN22-202ENST00000420377 NOXO1Q8NFA2 376 aa3.59□□□□□ -1.83
PTPN22-202ENST00000420377 ABHD5Q8WTS1 349 aa3.59□□□□□ -1.83
PTPN22-202ENST00000420377 APOBEC4Q8WW27 367 aaKnown RBP3.59□□□□□ -1.83
PTPN22-202ENST00000420377 RAB8BQ92930 207 aa3.59□□□□□ -1.83
PTPN22-202ENST00000420377 MBD6Q96DN6 1003 aa3.59□□□□□ -1.83
PTPN22-202ENST00000420377 KIRREL1Q96J84 757 aa3.59□□□□□ -1.83
PTPN22-202ENST00000420377 SRSF8Q9BRL6 282 aaKnown RBP3.59□□□□□ -1.83
PTPN22-202ENST00000420377 SPRY4Q9C004 299 aa3.59□□□□□ -1.83
PTPN22-202ENST00000420377 CTDSP1Q9GZU7 261 aa3.59□□□□□ -1.83
PTPN22-202ENST00000420377 MOB1AQ9H8S9 216 aa3.59□□□□□ -1.83
PTPN22-202ENST00000420377 ACSS2Q9NR19 701 aa3.59□□□□□ -1.83
PTPN22-202ENST00000420377 INPP5EQ9NRR6 644 aa3.59□□□□□ -1.83
PTPN22-202ENST00000420377 MED29Q9NX70 200 aa3.59□□□□□ -1.83
PTPN22-202ENST00000420377 KLRF1Q9NZS2 232 aa3.59□□□□□ -1.83
PTPN22-202ENST00000420377 ZNF319Q9P2F9 582 aa3.59□□□□□ -1.83
PTPN22-202ENST00000420377 RALYQ9UKM9 306 aaKnown RBP3.59□□□□□ -1.83
PTPN22-202ENST00000420377 SIGLEC7Q9Y286 467 aa3.59□□□□□ -1.83
PTPN22-202ENST00000420377 FXYD6-FXYD2A0A087WZ82 144 aa3.58□□□□□ -1.84
PTPN22-202ENST00000420377 LOC102723996A0A087X1L8 192 aa3.58□□□□□ -1.84
PTPN22-202ENST00000420377 A0A1B0GVT2 93 aa3.58□□□□□ -1.84
PTPN22-202ENST00000420377 TMEM189A5PLL7 270 aa3.58□□□□□ -1.84
PTPN22-202ENST00000420377 GAGE12HA6NDE8 117 aa3.58□□□□□ -1.84
PTPN22-202ENST00000420377 A8MZ25 164 aa3.58□□□□□ -1.84
PTPN22-202ENST00000420377 AGPAT2O15120 278 aa3.58□□□□□ -1.84
PTPN22-202ENST00000420377 OR1F1O43749 312 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms