RNA–Protein interactions for RNA: ENST00000419110.5

HMGB3-202, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 3

Gene HMGB3, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-202ENST00000419110 OR11L1Q8NGX0 322 aa5.07□□□□□ -1.6
HMGB3-202ENST00000419110 OR10Z1Q8NGY1 313 aa5.07□□□□□ -1.6
HMGB3-202ENST00000419110 ITLN2Q8WWU7 325 aaPredicted RBP5.07□□□□□ -1.6
HMGB3-202ENST00000419110 ARHGAP5-AS1Q96IT6 56 aa5.07□□□□□ -1.6
HMGB3-202ENST00000419110 WFIKKN1Q96NZ8 548 aa5.07□□□□□ -1.6
HMGB3-202ENST00000419110 OR2V2Q96R30 315 aa5.07□□□□□ -1.6
HMGB3-202ENST00000419110 PECRQ9BY49 303 aa5.07□□□□□ -1.6
HMGB3-202ENST00000419110 MRPL37Q9BZE1 423 aaKnown RBP5.07□□□□□ -1.6
HMGB3-202ENST00000419110 EGLN1Q9GZT9 426 aa5.07□□□□□ -1.6
HMGB3-202ENST00000419110 TLNRD1Q9H1K6 362 aa5.07□□□□□ -1.6
HMGB3-202ENST00000419110 OR51I2Q9H344 312 aa5.07□□□□□ -1.6
HMGB3-202ENST00000419110 MSL2Q9HCI7 577 aa5.07□□□□□ -1.6
HMGB3-202ENST00000419110 PLEKHJ1Q9NW61 149 aa5.07□□□□□ -1.6
HMGB3-202ENST00000419110 MCUBQ9NWR8 336 aa5.07□□□□□ -1.6
HMGB3-202ENST00000419110 GLS2Q9UI32 602 aa5.07□□□□□ -1.6
HMGB3-202ENST00000419110 FBXO9Q9UK97 447 aaPredicted RBP5.07□□□□□ -1.6
HMGB3-202ENST00000419110 HSF4Q9ULV5 492 aa5.07□□□□□ -1.6
HMGB3-202ENST00000419110 ZFYVE26Q68DK2 2539 aa5.07□□□□□ -1.6
HMGB3-202ENST00000419110 NBEAQ8NFP9 2946 aa5.07□□□□□ -1.6
HMGB3-202ENST00000419110 ICE1Q9Y2F5 2266 aa5.06□□□□□ -1.6
HMGB3-202ENST00000419110 A0A1B0GWJ7 208 aa5.06□□□□□ -1.6
HMGB3-202ENST00000419110 MEIOCA2RUB1 952 aa5.06□□□□□ -1.6
HMGB3-202ENST00000419110 DPRXA6NFQ7 191 aa5.06□□□□□ -1.6
HMGB3-202ENST00000419110 NKX6-3A6NJ46 265 aa5.06□□□□□ -1.6
HMGB3-202ENST00000419110 FOXI3A8MTJ6 420 aaPredicted RBP5.06□□□□□ -1.6
HMGB3-202ENST00000419110 ZNF736B4DX44 427 aaPredicted RBP5.06□□□□□ -1.6
HMGB3-202ENST00000419110 B8ZZF3 427 aa5.06□□□□□ -1.6
HMGB3-202ENST00000419110 DISC1C4P0D8 188 aa5.06□□□□□ -1.6
HMGB3-202ENST00000419110 GEMIN2O14893 280 aaKnown RBP5.06□□□□□ -1.6
HMGB3-202ENST00000419110 SOCS1O15524 211 aa5.06□□□□□ -1.6
HMGB3-202ENST00000419110 LANCL1O43813 399 aa5.06□□□□□ -1.6
HMGB3-202ENST00000419110 ORC5O43913 435 aa5.06□□□□□ -1.6
HMGB3-202ENST00000419110 GOSR1O95249 250 aa5.06□□□□□ -1.6
HMGB3-202ENST00000419110 RAB3DO95716 219 aa5.06□□□□□ -1.6
HMGB3-202ENST00000419110 MT-ND4P03905 459 aa5.06□□□□□ -1.6
HMGB3-202ENST00000419110 AMY2AP04746 511 aa5.06□□□□□ -1.6
HMGB3-202ENST00000419110 GRPP07492 148 aa5.06□□□□□ -1.6
HMGB3-202ENST00000419110 MELTFP08582 738 aa5.06□□□□□ -1.6
HMGB3-202ENST00000419110 OR4A8P0C604 315 aa5.06□□□□□ -1.6
HMGB3-202ENST00000419110 PTHLHP12272 177 aa5.06□□□□□ -1.6
HMGB3-202ENST00000419110 IRF2P14316 349 aa5.06□□□□□ -1.6
HMGB3-202ENST00000419110 ZNF44P15621 663 aa5.06□□□□□ -1.6
HMGB3-202ENST00000419110 TNFRSF1AP19438 455 aa5.06□□□□□ -1.6
HMGB3-202ENST00000419110 GLRA1P23415 457 aa5.06□□□□□ -1.6
HMGB3-202ENST00000419110 DTYMKP23919 212 aa5.06□□□□□ -1.6
HMGB3-202ENST00000419110 GRNP28799 593 aaKnown RBP5.06□□□□□ -1.6
HMGB3-202ENST00000419110 ARPC4P59998 168 aa5.06□□□□□ -1.6
HMGB3-202ENST00000419110 TNFAIP6P98066 277 aaPredicted RBP5.06□□□□□ -1.6
HMGB3-202ENST00000419110 TFF3Q07654 80 aa5.06□□□□□ -1.6
HMGB3-202ENST00000419110 RBM39Q14498 530 aaKnown RBP5.06□□□□□ -1.6
HMGB3-202ENST00000419110 RBMS2Q15434 407 aaKnown RBP5.06□□□□□ -1.6
HMGB3-202ENST00000419110 ADIPOQQ15848 244 aa5.06□□□□□ -1.6
HMGB3-202ENST00000419110 ZNF260Q3ZCT1 412 aa5.06□□□□□ -1.6
HMGB3-202ENST00000419110 CDNFQ49AH0 187 aa5.06□□□□□ -1.6
HMGB3-202ENST00000419110 PAN3Q58A45 887 aaKnown RBP5.06□□□□□ -1.6
HMGB3-202ENST00000419110 TMEM255AQ5JRV8 349 aa5.06□□□□□ -1.6
HMGB3-202ENST00000419110 FAM209AQ5JX71 171 aa5.06□□□□□ -1.6
HMGB3-202ENST00000419110 ATAD3CQ5T2N8 411 aa5.06□□□□□ -1.6
HMGB3-202ENST00000419110 STEAP1BQ6NZ63 245 aa5.06□□□□□ -1.6
HMGB3-202ENST00000419110 CCBE1Q6UXH8 406 aaPredicted RBP5.06□□□□□ -1.6
HMGB3-202ENST00000419110 Q6ZNX1 250 aa5.06□□□□□ -1.6
HMGB3-202ENST00000419110 Q6ZR03 302 aa5.06□□□□□ -1.6
HMGB3-202ENST00000419110 BIVMQ86UB2 503 aa5.06□□□□□ -1.6
HMGB3-202ENST00000419110 ZNF295-AS1Q8N0V1 137 aa5.06□□□□□ -1.6
HMGB3-202ENST00000419110 BATF2Q8N1L9 274 aa5.06□□□□□ -1.6
HMGB3-202ENST00000419110 TMEM229BQ8NBD8 167 aa5.06□□□□□ -1.6
HMGB3-202ENST00000419110 Q8NFD4 153 aa5.06□□□□□ -1.6
HMGB3-202ENST00000419110 OR4C16Q8NGL9 310 aa5.06□□□□□ -1.6
HMGB3-202ENST00000419110 OR5H2Q8NGV7 314 aa5.06□□□□□ -1.6
HMGB3-202ENST00000419110 FAM222BQ8WU58 562 aa5.06□□□□□ -1.6
HMGB3-202ENST00000419110 LRRC29Q8WV35 223 aa5.06□□□□□ -1.6
HMGB3-202ENST00000419110 ITLN1Q8WWA0 313 aa5.06□□□□□ -1.6
HMGB3-202ENST00000419110 ST8SIA4Q92187 359 aa5.06□□□□□ -1.6
HMGB3-202ENST00000419110 CREB3L1Q96BA8 519 aa5.06□□□□□ -1.6
HMGB3-202ENST00000419110 SEH1LQ96EE3 360 aa5.06□□□□□ -1.6
HMGB3-202ENST00000419110 PIK3IP1Q96FE7 263 aa5.06□□□□□ -1.6
HMGB3-202ENST00000419110 MEGF10Q96KG7 1140 aa5.06□□□□□ -1.6
HMGB3-202ENST00000419110 PRRT1Q99946 306 aa5.06□□□□□ -1.6
HMGB3-202ENST00000419110 CMSS1Q9BQ75 279 aaKnown RBP5.06□□□□□ -1.6
HMGB3-202ENST00000419110 NRIP2Q9BQI9 281 aa5.06□□□□□ -1.6
HMGB3-202ENST00000419110 CHST6Q9GZX3 395 aa5.06□□□□□ -1.6
HMGB3-202ENST00000419110 C20orf85Q9H1P6 137 aa5.06□□□□□ -1.6
HMGB3-202ENST00000419110 ZMAT3Q9HA38 289 aaKnown RBP5.06□□□□□ -1.6
HMGB3-202ENST00000419110 SAP30LQ9HAJ7 183 aa5.06□□□□□ -1.6
HMGB3-202ENST00000419110 ZNF286AQ9HBT8 521 aa5.06□□□□□ -1.6
HMGB3-202ENST00000419110 CHMP1AQ9HD42 196 aaPredicted RBP5.06□□□□□ -1.6
HMGB3-202ENST00000419110 UFSP2Q9NUQ7 469 aa5.06□□□□□ -1.6
HMGB3-202ENST00000419110 FAIMQ9NVQ4 179 aa5.06□□□□□ -1.6
HMGB3-202ENST00000419110 RCC2Q9P258 522 aaKnown RBP5.06□□□□□ -1.6
HMGB3-202ENST00000419110 ZDHHC8Q9ULC8 765 aa5.06□□□□□ -1.6
HMGB3-202ENST00000419110 ANAPC10Q9UM13 185 aa5.06□□□□□ -1.6
HMGB3-202ENST00000419110 NUBP2Q9Y5Y2 271 aa5.06□□□□□ -1.6
HMGB3-202ENST00000419110 NPTNQ9Y639 398 aa5.06□□□□□ -1.6
HMGB3-202ENST00000419110 DOPEY1Q5JWR5 2465 aa5.06□□□□□ -1.6
HMGB3-202ENST00000419110 DSCAMO60469 2012 aa5.06□□□□□ -1.6
HMGB3-202ENST00000419110 KALRNO60229 2985 aa5.05□□□□□ -1.6
HMGB3-202ENST00000419110 LRRC30A6NM36 301 aa5.05□□□□□ -1.6
HMGB3-202ENST00000419110 SHISA9B4DS77 424 aa5.05□□□□□ -1.6
HMGB3-202ENST00000419110 B9A039 149 aa5.05□□□□□ -1.6
HMGB3-202ENST00000419110 H0YL77 283 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 110.8 ms