RNA–Protein interactions for RNA: ENST00000417508.1

VPS16-204, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-204ENST00000417508 HTR1AP08908 422 aa14.92□□□□□ -0.02
VPS16-204ENST00000417508 ZNF20P17024 532 aa14.92□□□□□ -0.02
VPS16-204ENST00000417508 ERP29P30040 261 aaKnown RBP14.92□□□□□ -0.02
VPS16-204ENST00000417508 ALDH3A2P51648 485 aa14.92□□□□□ -0.02
VPS16-204ENST00000417508 ZNF626Q68DY1 528 aa14.92□□□□□ -0.02
VPS16-204ENST00000417508 FGGYQ96C11 551 aa14.92□□□□□ -0.02
VPS16-204ENST00000417508 ADAT3Q96EY9 351 aaPredicted RBP14.92□□□□□ -0.02
VPS16-204ENST00000417508 RHOFQ9HBH0 211 aa14.92□□□□□ -0.02
VPS16-204ENST00000417508 PITPNC1Q9UKF7 332 aa14.92□□□□□ -0.02
VPS16-204ENST00000417508 HHLA2Q9UM44 414 aa14.92□□□□□ -0.02
VPS16-204ENST00000417508 EXOGQ9Y2C4 368 aaKnown RBP14.92□□□□□ -0.02
VPS16-204ENST00000417508 IGKV1-9A0A0C4DH69 117 aa14.91□□□□□ -0.02
VPS16-204ENST00000417508 H3BUI4 141 aa14.91□□□□□ -0.02
VPS16-204ENST00000417508 MGST3O14880 152 aa14.91□□□□□ -0.02
VPS16-204ENST00000417508 INMTO95050 263 aa14.91□□□□□ -0.02
VPS16-204ENST00000417508 MT-ND2P03891 347 aa14.91□□□□□ -0.02
VPS16-204ENST00000417508 CSF1P09603 554 aa14.91□□□□□ -0.02
VPS16-204ENST00000417508 AZGP1P25311 298 aaKnown RBP14.91□□□□□ -0.02
VPS16-204ENST00000417508 DYNLT3P51808 116 aa14.91□□□□□ -0.02
VPS16-204ENST00000417508 OR12D2P58182 307 aa14.91□□□□□ -0.02
VPS16-204ENST00000417508 ACTA2P62736 377 aa14.91□□□□□ -0.02
VPS16-204ENST00000417508 ACTG2P63267 376 aa14.91□□□□□ -0.02
VPS16-204ENST00000417508 ZNF91Q05481 1191 aa14.91□□□□□ -0.02
VPS16-204ENST00000417508 PDZK1IP1Q13113 114 aa14.91□□□□□ -0.02
VPS16-204ENST00000417508 GRK1Q15835 563 aa14.91□□□□□ -0.02
VPS16-204ENST00000417508 KIAA2026Q5HYC2 2103 aa14.91□□□□□ -0.02
VPS16-204ENST00000417508 MINOS1Q5TGZ0 78 aa14.91□□□□□ -0.02
VPS16-204ENST00000417508 ZBTB49Q6ZSB9 765 aa14.91□□□□□ -0.02
VPS16-204ENST00000417508 LHFPL4Q7Z7J7 247 aa14.91□□□□□ -0.02
VPS16-204ENST00000417508 RPS4Y2Q8TD47 263 aa14.91□□□□□ -0.02
VPS16-204ENST00000417508 ABCB10Q9NRK6 738 aa14.91□□□□□ -0.02
VPS16-204ENST00000417508 MINOS1-NBL1R4GNA1 71 aa14.91□□□□□ -0.02
VPS16-204ENST00000417508 FUOMA2VDF0 154 aa14.9□□□□□ -0.02
VPS16-204ENST00000417508 EI24O14681 340 aa14.9□□□□□ -0.02
VPS16-204ENST00000417508 SH2D1BO14796 132 aa14.9□□□□□ -0.02
VPS16-204ENST00000417508 MPZL2O60487 215 aa14.9□□□□□ -0.02
VPS16-204ENST00000417508 OCM2P0CE71 109 aa14.9□□□□□ -0.02
VPS16-204ENST00000417508 OCMP0CE72 109 aaPredicted RBP14.9□□□□□ -0.02
VPS16-204ENST00000417508 GABRR1P24046 479 aa14.9□□□□□ -0.02
VPS16-204ENST00000417508 NPBWR2P48146 333 aa14.9□□□□□ -0.02
VPS16-204ENST00000417508 POU3F4P49335 361 aa14.9□□□□□ -0.02
VPS16-204ENST00000417508 CFHR4Q92496 578 aa14.9□□□□□ -0.02
VPS16-204ENST00000417508 Q96MT0 163 aa14.9□□□□□ -0.02
VPS16-204ENST00000417508 OPALINQ96PE5 141 aa14.9□□□□□ -0.02
VPS16-204ENST00000417508 TCF19Q9Y242 345 aa14.9□□□□□ -0.02
VPS16-204ENST00000417508 UBE2J1Q9Y385 318 aaPredicted RBP14.9□□□□□ -0.02
VPS16-204ENST00000417508 PCDHGB5Q9Y5G0 923 aa14.9□□□□□ -0.02
VPS16-204ENST00000417508 SESN1Q9Y6P5 492 aa14.9□□□□□ -0.02
VPS16-204ENST00000417508 J3QLW9 94 aa14.89□□□□□ -0.03
VPS16-204ENST00000417508 ALX3O95076 343 aa14.89□□□□□ -0.03
VPS16-204ENST00000417508 TSPAN15O95858 294 aa14.89□□□□□ -0.03
VPS16-204ENST00000417508 IGHA1P01876 353 aa14.89□□□□□ -0.03
VPS16-204ENST00000417508 ZNF19P17023 458 aa14.89□□□□□ -0.03
VPS16-204ENST00000417508 PRKACAP17612 351 aa14.89□□□□□ -0.03
VPS16-204ENST00000417508 BCL3P20749 454 aa14.89□□□□□ -0.03
VPS16-204ENST00000417508 NANOS3P60323 173 aaKnown RBP14.89□□□□□ -0.03
VPS16-204ENST00000417508 MRPL28Q13084 256 aaKnown RBP14.89□□□□□ -0.03
VPS16-204ENST00000417508 ALKBH1Q13686 389 aaKnown RBP14.89□□□□□ -0.03
VPS16-204ENST00000417508 GALEQ14376 348 aa14.89□□□□□ -0.03
VPS16-204ENST00000417508 EDDM3AQ14507 147 aa14.89□□□□□ -0.03
VPS16-204ENST00000417508 FAM189A2Q15884 450 aa14.89□□□□□ -0.03
VPS16-204ENST00000417508 SSX2Q16385 188 aa14.89□□□□□ -0.03
VPS16-204ENST00000417508 ZIK1Q3SY52 487 aaPredicted RBP14.89□□□□□ -0.03
VPS16-204ENST00000417508 SAXO1Q8IYX7 474 aa14.89□□□□□ -0.03
VPS16-204ENST00000417508 Q8N2B8 174 aa14.89□□□□□ -0.03
VPS16-204ENST00000417508 OR52N4Q8NGI2 321 aa14.89□□□□□ -0.03
VPS16-204ENST00000417508 PELI1Q96FA3 418 aa14.89□□□□□ -0.03
VPS16-204ENST00000417508 HMG20AQ9NP66 347 aa14.89□□□□□ -0.03
VPS16-204ENST00000417508 RBFOX1Q9NWB1 397 aaKnown RBP14.89□□□□□ -0.03
VPS16-204ENST00000417508 SIGLEC9Q9Y336 463 aa14.89□□□□□ -0.03
VPS16-204ENST00000417508 TGP01266 2768 aa14.88□□□□□ -0.03
VPS16-204ENST00000417508 A6NDX4 124 aa14.88□□□□□ -0.03
VPS16-204ENST00000417508 OR4C45A6NMZ5 311 aa14.88□□□□□ -0.03
VPS16-204ENST00000417508 H3BNX3 289 aa14.88□□□□□ -0.03
VPS16-204ENST00000417508 CHST1O43916 411 aa14.88□□□□□ -0.03
VPS16-204ENST00000417508 PSPNO60542 156 aa14.88□□□□□ -0.03
VPS16-204ENST00000417508 FADS2O95864 444 aaKnown RBP14.88□□□□□ -0.03
VPS16-204ENST00000417508 LMO1P25800 156 aa14.88□□□□□ -0.03
VPS16-204ENST00000417508 PAX6P26367 422 aa14.88□□□□□ -0.03
VPS16-204ENST00000417508 DYNC1I2Q13409 638 aaKnown RBP14.88□□□□□ -0.03
VPS16-204ENST00000417508 KPNB1Q14974 876 aaKnown RBP14.88□□□□□ -0.03
VPS16-204ENST00000417508 OR52W1Q6IF63 320 aa14.88□□□□□ -0.03
VPS16-204ENST00000417508 TCF23Q7RTU1 214 aa14.88□□□□□ -0.03
VPS16-204ENST00000417508 DYNAPQ8N1N2 210 aa14.88□□□□□ -0.03
VPS16-204ENST00000417508 SYS1Q8N2H4 156 aa14.88□□□□□ -0.03
VPS16-204ENST00000417508 CBR4Q8N4T8 237 aa14.88□□□□□ -0.03
VPS16-204ENST00000417508 ZNF676Q8N7Q3 588 aa14.88□□□□□ -0.03
VPS16-204ENST00000417508 OR4S1Q8NGB4 309 aa14.88□□□□□ -0.03
VPS16-204ENST00000417508 OR13C3Q8NGS6 347 aa14.88□□□□□ -0.03
VPS16-204ENST00000417508 FAM110DQ8TAY7 271 aaPredicted RBP14.88□□□□□ -0.03
VPS16-204ENST00000417508 HAVCR2Q8TDQ0 301 aa14.88□□□□□ -0.03
VPS16-204ENST00000417508 LGALS12Q96DT0 336 aa14.88□□□□□ -0.03
VPS16-204ENST00000417508 TMEM133Q9H2Q1 129 aa14.88□□□□□ -0.03
VPS16-204ENST00000417508 INPP5EQ9NRR6 644 aa14.88□□□□□ -0.03
VPS16-204ENST00000417508 GMPPBQ9Y5P6 360 aa14.88□□□□□ -0.03
VPS16-204ENST00000417508 KDM4BO94953 1096 aa14.87□□□□□ -0.03
VPS16-204ENST00000417508 GABRB1P18505 474 aa14.87□□□□□ -0.03
VPS16-204ENST00000417508 DUSP1P28562 367 aa14.87□□□□□ -0.03
VPS16-204ENST00000417508 P2RX3P56373 397 aa14.87□□□□□ -0.03
VPS16-204ENST00000417508 CCDC121Q6ZUS5 278 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms