RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 SLC7A6OSQ96CW6 309 aaPredicted RBP11.89□□□□□ -0.51
RPS28-201ENST00000417088 BORCS8Q96FH0 119 aa11.89□□□□□ -0.51
RPS28-201ENST00000417088 OCSTAMPQ9BR26 566 aa11.89□□□□□ -0.51
RPS28-201ENST00000417088 CHST5Q9GZS9 411 aa11.89□□□□□ -0.51
RPS28-201ENST00000417088 LINC00312Q9Y6C7 94 aa11.89□□□□□ -0.51
RPS28-201ENST00000417088 PSPNO60542 156 aa11.88□□□□□ -0.51
RPS28-201ENST00000417088 GATBO75879 557 aaKnown RBP11.88□□□□□ -0.51
RPS28-201ENST00000417088 ALDOBP05062 364 aa11.88□□□□□ -0.51
RPS28-201ENST00000417088 OR2T7P0C7T2 308 aa11.88□□□□□ -0.51
RPS28-201ENST00000417088 GABRR1P24046 479 aa11.88□□□□□ -0.51
RPS28-201ENST00000417088 PEX2P28328 305 aa11.88□□□□□ -0.51
RPS28-201ENST00000417088 DUSP1P28562 367 aa11.88□□□□□ -0.51
RPS28-201ENST00000417088 NPBWR2P48146 333 aa11.88□□□□□ -0.51
RPS28-201ENST00000417088 CD83Q01151 205 aa11.88□□□□□ -0.51
RPS28-201ENST00000417088 ZNF91Q05481 1191 aa11.88□□□□□ -0.51
RPS28-201ENST00000417088 GRK1Q15835 563 aa11.88□□□□□ -0.51
RPS28-201ENST00000417088 FOXB2Q5VYV0 432 aa11.88□□□□□ -0.51
RPS28-201ENST00000417088 KDM4DQ6B0I6 523 aa11.88□□□□□ -0.51
RPS28-201ENST00000417088 CCDC54Q8NEL0 328 aa11.88□□□□□ -0.51
RPS28-201ENST00000417088 WFDC9Q8NEX5 89 aa11.88□□□□□ -0.51
RPS28-201ENST00000417088 NDNFQ8TB73 568 aa11.88□□□□□ -0.51
RPS28-201ENST00000417088 ADI1Q9BV57 179 aa11.88□□□□□ -0.51
RPS28-201ENST00000417088 CHST6Q9GZX3 395 aa11.88□□□□□ -0.51
RPS28-201ENST00000417088 TMEM133Q9H2Q1 129 aa11.88□□□□□ -0.51
RPS28-201ENST00000417088 WARS2Q9UGM6 360 aaKnown RBP11.88□□□□□ -0.51
RPS28-201ENST00000417088 A0A1W2PRX2 142 aa11.87□□□□□ -0.51
RPS28-201ENST00000417088 G3V2T6 193 aa11.87□□□□□ -0.51
RPS28-201ENST00000417088 SULT1C4O75897 302 aa11.87□□□□□ -0.51
RPS28-201ENST00000417088 MMP23AO75900 390 aa11.87□□□□□ -0.51
RPS28-201ENST00000417088 DNAJC8O75937 253 aaPredicted RBP11.87□□□□□ -0.51
RPS28-201ENST00000417088 APOL3O95236 402 aa11.87□□□□□ -0.51
RPS28-201ENST00000417088 SERPINA3P01011 423 aa11.87□□□□□ -0.51
RPS28-201ENST00000417088 AZGP1P25311 298 aaKnown RBP11.87□□□□□ -0.51
RPS28-201ENST00000417088 HTR1FP30939 366 aa11.87□□□□□ -0.51
RPS28-201ENST00000417088 Q8IYB0 196 aa11.87□□□□□ -0.51
RPS28-201ENST00000417088 ENTHD1Q8IYW4 607 aa11.87□□□□□ -0.51
RPS28-201ENST00000417088 PRSS35Q8N3Z0 413 aa11.87□□□□□ -0.51
RPS28-201ENST00000417088 DNAAF1Q8NEP3 725 aa11.87□□□□□ -0.51
RPS28-201ENST00000417088 OR5AU1Q8NGC0 362 aa11.87□□□□□ -0.51
RPS28-201ENST00000417088 OR4P4Q8NGL7 312 aa11.87□□□□□ -0.51
RPS28-201ENST00000417088 C10orf35Q96D05 121 aa11.87□□□□□ -0.51
RPS28-201ENST00000417088 CLEC7AQ9BXN2 247 aa11.87□□□□□ -0.51
RPS28-201ENST00000417088 RBFOX1Q9NWB1 397 aaKnown RBP11.87□□□□□ -0.51
RPS28-201ENST00000417088 IGKV1-9A0A0C4DH69 117 aa11.86□□□□□ -0.51
RPS28-201ENST00000417088 TRBV2A0A0J9YWF9 115 aa11.86□□□□□ -0.51
RPS28-201ENST00000417088 LOC107986453A0A1B0GWG9 222 aa11.86□□□□□ -0.51
RPS28-201ENST00000417088 MGST3O14880 152 aa11.86□□□□□ -0.51
RPS28-201ENST00000417088 ENTPD6O75354 484 aa11.86□□□□□ -0.51
RPS28-201ENST00000417088 CALCBP10092 127 aa11.86□□□□□ -0.51
RPS28-201ENST00000417088 IGLL1P15814 213 aa11.86□□□□□ -0.51
RPS28-201ENST00000417088 BCL3P20749 454 aa11.86□□□□□ -0.51
RPS28-201ENST00000417088 HTR1DP28221 377 aa11.86□□□□□ -0.51
RPS28-201ENST00000417088 ERP29P30040 261 aaKnown RBP11.86□□□□□ -0.51
RPS28-201ENST00000417088 KIR3DL2P43630 455 aa11.86□□□□□ -0.51
RPS28-201ENST00000417088 OR3A1P47881 315 aa11.86□□□□□ -0.51
RPS28-201ENST00000417088 RBP2P50120 134 aa11.86□□□□□ -0.51
RPS28-201ENST00000417088 ATP1B3P54709 279 aa11.86□□□□□ -0.51
RPS28-201ENST00000417088 ZNF146Q15072 292 aa11.86□□□□□ -0.51
RPS28-201ENST00000417088 ATP6AP1Q15904 470 aa11.86□□□□□ -0.51
RPS28-201ENST00000417088 TCTEX1D4Q5JR98 221 aa11.86□□□□□ -0.51
RPS28-201ENST00000417088 BAIAP2L2Q6UXY1 529 aa11.86□□□□□ -0.51
RPS28-201ENST00000417088 ZBTB49Q6ZSB9 765 aa11.86□□□□□ -0.51
RPS28-201ENST00000417088 RDH10Q8IZV5 341 aa11.86□□□□□ -0.51
RPS28-201ENST00000417088 FAM58AQ8N1B3 248 aa11.86□□□□□ -0.51
RPS28-201ENST00000417088 OR10H4Q8NGA5 316 aa11.86□□□□□ -0.51
RPS28-201ENST00000417088 PP6455Q8WZ26 134 aa11.86□□□□□ -0.51
RPS28-201ENST00000417088 RNF166Q96A37 237 aaPredicted RBP11.86□□□□□ -0.51
RPS28-201ENST00000417088 ADAT3Q96EY9 351 aaPredicted RBP11.86□□□□□ -0.51
RPS28-201ENST00000417088 GABARAPL1Q9H0R8 117 aa11.86□□□□□ -0.51
RPS28-201ENST00000417088 DPM3Q9P2X0 92 aa11.86□□□□□ -0.51
RPS28-201ENST00000417088 H3BUI4 141 aa11.85□□□□□ -0.51
RPS28-201ENST00000417088 PRKACAP17612 351 aa11.85□□□□□ -0.51
RPS28-201ENST00000417088 CD33P20138 364 aa11.85□□□□□ -0.51
RPS28-201ENST00000417088 CD24P25063 80 aa11.85□□□□□ -0.51
RPS28-201ENST00000417088 POLR2IP36954 125 aaKnown RBP11.85□□□□□ -0.51
RPS28-201ENST00000417088 POU3F4P49335 361 aa11.85□□□□□ -0.51
RPS28-201ENST00000417088 SNU13P55769 128 aaKnown RBP11.85□□□□□ -0.51
RPS28-201ENST00000417088 P2RX3P56373 397 aa11.85□□□□□ -0.51
RPS28-201ENST00000417088 ISL1P61371 349 aa11.85□□□□□ -0.51
RPS28-201ENST00000417088 ZNF85Q03923 595 aa11.85□□□□□ -0.51
RPS28-201ENST00000417088 IL18R1Q13478 541 aa11.85□□□□□ -0.51
RPS28-201ENST00000417088 C16orf82Q7Z2V1 217 aa11.85□□□□□ -0.51
RPS28-201ENST00000417088 TRAPPC6BQ86SZ2 158 aa11.85□□□□□ -0.51
RPS28-201ENST00000417088 ZDHHC13Q8IUH4 622 aa11.85□□□□□ -0.51
RPS28-201ENST00000417088 ABHD12Q8N2K0 398 aa11.85□□□□□ -0.51
RPS28-201ENST00000417088 UBE2J1Q9Y385 318 aaPredicted RBP11.85□□□□□ -0.51
RPS28-201ENST00000417088 CYB5AP00167 134 aa11.84□□□□□ -0.51
RPS28-201ENST00000417088 UBCP0CG48 685 aaKnown RBP11.84□□□□□ -0.51
RPS28-201ENST00000417088 ATF1P18846 271 aa11.84□□□□□ -0.51
RPS28-201ENST00000417088 MTCP1P56278 107 aa11.84□□□□□ -0.51
RPS28-201ENST00000417088 BDH1Q02338 343 aa11.84□□□□□ -0.51
RPS28-201ENST00000417088 TP53I3Q53FA7 332 aa11.84□□□□□ -0.51
RPS28-201ENST00000417088 SPIN3Q5JUX0 258 aa11.84□□□□□ -0.51
RPS28-201ENST00000417088 PRAMEF5Q5TYX0 476 aa11.84□□□□□ -0.51
RPS28-201ENST00000417088 UTS2BQ765I0 119 aa11.84□□□□□ -0.51
RPS28-201ENST00000417088 CENPVQ7Z7K6 275 aaPredicted RBP11.84□□□□□ -0.51
RPS28-201ENST00000417088 AMIGO2Q86SJ2 522 aa11.84□□□□□ -0.51
RPS28-201ENST00000417088 CIB1Q99828 191 aa11.84□□□□□ -0.51
RPS28-201ENST00000417088 LIN7BQ9HAP6 207 aa11.84□□□□□ -0.51
RPS28-201ENST00000417088 HMG20AQ9NP66 347 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms