RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 NPFFR1Q9GZQ6 430 aa14.25□□□□□ -0.13
PDLIM2-208ENST00000416159 GLS2Q9UI32 602 aa14.25□□□□□ -0.13
PDLIM2-208ENST00000416159 HHLA2Q9UM44 414 aa14.25□□□□□ -0.13
PDLIM2-208ENST00000416159 EXOGQ9Y2C4 368 aaKnown RBP14.25□□□□□ -0.13
PDLIM2-208ENST00000416159 TET2Q6N021 2002 aaPredicted RBP14.24□□□□□ -0.13
PDLIM2-208ENST00000416159 IGKV1-9A0A0C4DH69 117 aa14.24□□□□□ -0.13
PDLIM2-208ENST00000416159 ODF3BA8MYP8 253 aa14.24□□□□□ -0.13
PDLIM2-208ENST00000416159 E9PQ18 207 aa14.24□□□□□ -0.13
PDLIM2-208ENST00000416159 H3BNX3 289 aa14.24□□□□□ -0.13
PDLIM2-208ENST00000416159 NPBWR2P48146 333 aa14.24□□□□□ -0.13
PDLIM2-208ENST00000416159 EDDM3AQ14507 147 aa14.24□□□□□ -0.13
PDLIM2-208ENST00000416159 KPNB1Q14974 876 aaKnown RBP14.24□□□□□ -0.13
PDLIM2-208ENST00000416159 ZNF146Q15072 292 aa14.24□□□□□ -0.13
PDLIM2-208ENST00000416159 GRK1Q15835 563 aa14.24□□□□□ -0.13
PDLIM2-208ENST00000416159 ZNF626Q68DY1 528 aa14.24□□□□□ -0.13
PDLIM2-208ENST00000416159 SPSB1Q96BD6 273 aa14.24□□□□□ -0.13
PDLIM2-208ENST00000416159 RBFOX1Q9NWB1 397 aaKnown RBP14.24□□□□□ -0.13
PDLIM2-208ENST00000416159 SIGLEC9Q9Y336 463 aa14.24□□□□□ -0.13
PDLIM2-208ENST00000416159 LINC00312Q9Y6C7 94 aa14.24□□□□□ -0.13
PDLIM2-208ENST00000416159 MEGF8Q7Z7M0 2845 aa14.23□□□□□ -0.13
PDLIM2-208ENST00000416159 J3QLW9 94 aa14.23□□□□□ -0.13
PDLIM2-208ENST00000416159 MGST3O14880 152 aa14.23□□□□□ -0.13
PDLIM2-208ENST00000416159 IGHA1P01876 353 aa14.23□□□□□ -0.13
PDLIM2-208ENST00000416159 CSF1P09603 554 aa14.23□□□□□ -0.13
PDLIM2-208ENST00000416159 OCM2P0CE71 109 aa14.23□□□□□ -0.13
PDLIM2-208ENST00000416159 OCMP0CE72 109 aaPredicted RBP14.23□□□□□ -0.13
PDLIM2-208ENST00000416159 ZNF19P17023 458 aa14.23□□□□□ -0.13
PDLIM2-208ENST00000416159 PRKACAP17612 351 aa14.23□□□□□ -0.13
PDLIM2-208ENST00000416159 BCL3P20749 454 aa14.23□□□□□ -0.13
PDLIM2-208ENST00000416159 GABRR1P24046 479 aa14.23□□□□□ -0.13
PDLIM2-208ENST00000416159 NANOS3P60323 173 aaKnown RBP14.23□□□□□ -0.13
PDLIM2-208ENST00000416159 ACTA2P62736 377 aa14.23□□□□□ -0.13
PDLIM2-208ENST00000416159 ACTG2P63267 376 aa14.23□□□□□ -0.13
PDLIM2-208ENST00000416159 PDZK1IP1Q13113 114 aa14.23□□□□□ -0.13
PDLIM2-208ENST00000416159 FAM189A2Q15884 450 aa14.23□□□□□ -0.13
PDLIM2-208ENST00000416159 SPIN3Q5JUX0 258 aa14.23□□□□□ -0.13
PDLIM2-208ENST00000416159 OR52N4Q8NGI2 321 aa14.23□□□□□ -0.13
PDLIM2-208ENST00000416159 OPALINQ96PE5 141 aa14.23□□□□□ -0.13
PDLIM2-208ENST00000416159 NEK6Q9HC98 313 aa14.23□□□□□ -0.13
PDLIM2-208ENST00000416159 ABCB10Q9NRK6 738 aa14.23□□□□□ -0.13
PDLIM2-208ENST00000416159 IL36RNQ9UBH0 155 aa14.23□□□□□ -0.13
PDLIM2-208ENST00000416159 GMPPBQ9Y5P6 360 aa14.23□□□□□ -0.13
PDLIM2-208ENST00000416159 MEX3AA1L020 520 aaKnown RBP14.22□□□□□ -0.13
PDLIM2-208ENST00000416159 TSPAN15O95858 294 aa14.22□□□□□ -0.13
PDLIM2-208ENST00000416159 MT-ND2P03891 347 aa14.22□□□□□ -0.13
PDLIM2-208ENST00000416159 RPSAP08865 295 aaKnown RBP14.22□□□□□ -0.13
PDLIM2-208ENST00000416159 DUSP1P28562 367 aa14.22□□□□□ -0.13
PDLIM2-208ENST00000416159 ERP29P30040 261 aaKnown RBP14.22□□□□□ -0.13
PDLIM2-208ENST00000416159 DYNC1I2Q13409 638 aaKnown RBP14.22□□□□□ -0.13
PDLIM2-208ENST00000416159 ALKBH1Q13686 389 aaKnown RBP14.22□□□□□ -0.13
PDLIM2-208ENST00000416159 CCDC121Q6ZUS5 278 aa14.22□□□□□ -0.13
PDLIM2-208ENST00000416159 TCF23Q7RTU1 214 aa14.22□□□□□ -0.13
PDLIM2-208ENST00000416159 DYNAPQ8N1N2 210 aa14.22□□□□□ -0.13
PDLIM2-208ENST00000416159 CBR4Q8N4T8 237 aa14.22□□□□□ -0.13
PDLIM2-208ENST00000416159 OR13C3Q8NGS6 347 aa14.22□□□□□ -0.13
PDLIM2-208ENST00000416159 FAM110DQ8TAY7 271 aaPredicted RBP14.22□□□□□ -0.13
PDLIM2-208ENST00000416159 RPS4Y2Q8TD47 263 aa14.22□□□□□ -0.13
PDLIM2-208ENST00000416159 LGALS12Q96DT0 336 aa14.22□□□□□ -0.13
PDLIM2-208ENST00000416159 PELI1Q96FA3 418 aa14.22□□□□□ -0.13
PDLIM2-208ENST00000416159 C4orf36Q96KX1 117 aa14.22□□□□□ -0.13
PDLIM2-208ENST00000416159 CHST6Q9GZX3 395 aa14.22□□□□□ -0.13
PDLIM2-208ENST00000416159 HMG20AQ9NP66 347 aa14.22□□□□□ -0.13
PDLIM2-208ENST00000416159 PITPNC1Q9UKF7 332 aa14.22□□□□□ -0.13
PDLIM2-208ENST00000416159 TCF19Q9Y242 345 aa14.22□□□□□ -0.13
PDLIM2-208ENST00000416159 SESN1Q9Y6P5 492 aa14.22□□□□□ -0.13
PDLIM2-208ENST00000416159 OR4C45A6NMZ5 311 aa14.21□□□□□ -0.13
PDLIM2-208ENST00000416159 SH2D1BO14796 132 aa14.21□□□□□ -0.13
PDLIM2-208ENST00000416159 CHST1O43916 411 aa14.21□□□□□ -0.13
PDLIM2-208ENST00000416159 MPZL2O60487 215 aa14.21□□□□□ -0.13
PDLIM2-208ENST00000416159 PSPNO60542 156 aa14.21□□□□□ -0.13
PDLIM2-208ENST00000416159 GALEQ14376 348 aa14.21□□□□□ -0.13
PDLIM2-208ENST00000416159 SSX2Q16385 188 aa14.21□□□□□ -0.13
PDLIM2-208ENST00000416159 PLA1AQ53H76 456 aa14.21□□□□□ -0.13
PDLIM2-208ENST00000416159 MINOS1Q5TGZ0 78 aa14.21□□□□□ -0.13
PDLIM2-208ENST00000416159 ZBTB49Q6ZSB9 765 aa14.21□□□□□ -0.13
PDLIM2-208ENST00000416159 ZNF676Q8N7Q3 588 aa14.21□□□□□ -0.13
PDLIM2-208ENST00000416159 TPRX1Q8N7U7 411 aa14.21□□□□□ -0.13
PDLIM2-208ENST00000416159 OR4S1Q8NGB4 309 aa14.21□□□□□ -0.13
PDLIM2-208ENST00000416159 Q96MT0 163 aa14.21□□□□□ -0.13
PDLIM2-208ENST00000416159 NKX3-1Q99801 234 aaPredicted RBP14.21□□□□□ -0.13
PDLIM2-208ENST00000416159 RHOFQ9HBH0 211 aa14.21□□□□□ -0.13
PDLIM2-208ENST00000416159 EXOSC4Q9NPD3 245 aaKnown RBP14.21□□□□□ -0.13
PDLIM2-208ENST00000416159 PCDHGB5Q9Y5G0 923 aa14.21□□□□□ -0.13
PDLIM2-208ENST00000416159 MINOS1-NBL1R4GNA1 71 aa14.21□□□□□ -0.13
PDLIM2-208ENST00000416159 CMYA5Q8N3K9 4069 aa14.2□□□□□ -0.14
PDLIM2-208ENST00000416159 KIAA2026Q5HYC2 2103 aa14.2□□□□□ -0.14
PDLIM2-208ENST00000416159 FUOMA2VDF0 154 aa14.2□□□□□ -0.14
PDLIM2-208ENST00000416159 A6NDX4 124 aa14.2□□□□□ -0.14
PDLIM2-208ENST00000416159 CALCBP10092 127 aa14.2□□□□□ -0.14
PDLIM2-208ENST00000416159 GABRB1P18505 474 aa14.2□□□□□ -0.14
PDLIM2-208ENST00000416159 RAB13P51153 203 aa14.2□□□□□ -0.14
PDLIM2-208ENST00000416159 DYNLT3P51808 116 aa14.2□□□□□ -0.14
PDLIM2-208ENST00000416159 SNU13P55769 128 aaKnown RBP14.2□□□□□ -0.14
PDLIM2-208ENST00000416159 LDLRAD2Q5SZI1 272 aa14.2□□□□□ -0.14
PDLIM2-208ENST00000416159 LHFPL3Q86UP9 236 aa14.2□□□□□ -0.14
PDLIM2-208ENST00000416159 SYS1Q8N2H4 156 aa14.2□□□□□ -0.14
PDLIM2-208ENST00000416159 KLHDC1Q8N7A1 406 aa14.2□□□□□ -0.14
PDLIM2-208ENST00000416159 OR51A4Q8NGJ6 313 aa14.2□□□□□ -0.14
PDLIM2-208ENST00000416159 OR13C9Q8NGT0 318 aa14.2□□□□□ -0.14
PDLIM2-208ENST00000416159 OR10AC1Q8NH08 325 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms