RNA–Protein interactions for RNA: ENST00000415541.5

SIK3-203, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 3,816 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-203ENST00000415541 SCGB1D2O95969 90 aa6.91□□□□□ -1.3
SIK3-203ENST00000415541 TDGF1P13385 188 aa6.91□□□□□ -1.3
SIK3-203ENST00000415541 RPL23AP62750 156 aaKnown RBP6.91□□□□□ -1.3
SIK3-203ENST00000415541 FAM53BQ14153 422 aa6.91□□□□□ -1.3
SIK3-203ENST00000415541 CLEC18BQ6UXF7 455 aa6.91□□□□□ -1.3
SIK3-203ENST00000415541 TOMM20LQ6UXN7 152 aa6.91□□□□□ -1.3
SIK3-203ENST00000415541 NUP54Q7Z3B4 507 aa6.91□□□□□ -1.3
SIK3-203ENST00000415541 FAM219AQ8IW50 185 aa6.91□□□□□ -1.3
SIK3-203ENST00000415541 NOXO1Q8NFA2 376 aa6.91□□□□□ -1.3
SIK3-203ENST00000415541 OR1L3Q8NH93 324 aa6.91□□□□□ -1.3
SIK3-203ENST00000415541 RNF128Q8TEB7 428 aa6.91□□□□□ -1.3
SIK3-203ENST00000415541 Q96M85 177 aa6.91□□□□□ -1.3
SIK3-203ENST00000415541 TNFRSF13CQ96RJ3 184 aa6.91□□□□□ -1.3
SIK3-203ENST00000415541 ZMAT3Q9HA38 289 aaKnown RBP6.91□□□□□ -1.3
SIK3-203ENST00000415541 TMEM74BQ9NUR3 256 aa6.91□□□□□ -1.3
SIK3-203ENST00000415541 P4HTMQ9NXG6 502 aa6.91□□□□□ -1.3
SIK3-203ENST00000415541 KLK13Q9UKR3 277 aa6.91□□□□□ -1.3
SIK3-203ENST00000415541 C14orf166Q9Y224 244 aaKnown RBP6.91□□□□□ -1.3
SIK3-203ENST00000415541 IER3IP1Q9Y5U9 82 aa6.91□□□□□ -1.3
SIK3-203ENST00000415541 PRUNE2Q8WUY3 3088 aa6.91□□□□□ -1.3
SIK3-203ENST00000415541 G3V3Y1 287 aa6.9□□□□□ -1.3
SIK3-203ENST00000415541 HRKO00198 91 aa6.9□□□□□ -1.3
SIK3-203ENST00000415541 GPR137BO60478 399 aa6.9□□□□□ -1.3
SIK3-203ENST00000415541 KLK2P20151 261 aa6.9□□□□□ -1.3
SIK3-203ENST00000415541 CFPP27918 469 aa6.9□□□□□ -1.3
SIK3-203ENST00000415541 TMEM41BQ5BJD5 291 aa6.9□□□□□ -1.3
SIK3-203ENST00000415541 TGIF2LYQ8IUE0 185 aa6.9□□□□□ -1.3
SIK3-203ENST00000415541 CSTL1Q9H114 145 aa6.9□□□□□ -1.3
SIK3-203ENST00000415541 NXF5Q9H1B4 397 aaKnown RBP6.9□□□□□ -1.3
SIK3-203ENST00000415541 B3GAT1Q9P2W7 334 aa6.9□□□□□ -1.3
SIK3-203ENST00000415541 LAMP3Q9UQV4 416 aa6.9□□□□□ -1.3
SIK3-203ENST00000415541 TMEM14AQ9Y6G1 99 aa6.9□□□□□ -1.3
SIK3-203ENST00000415541 RTTNQ86VV8 2226 aa6.9□□□□□ -1.3
SIK3-203ENST00000415541 UNC80Q8N2C7 3258 aa6.9□□□□□ -1.3
SIK3-203ENST00000415541 HSPB2A8KAH6 182 aa6.9□□□□□ -1.3
SIK3-203ENST00000415541 K7ERU9 68 aa6.9□□□□□ -1.3
SIK3-203ENST00000415541 CYR61O00622 381 aa6.9□□□□□ -1.3
SIK3-203ENST00000415541 DOK2O60496 412 aa6.9□□□□□ -1.3
SIK3-203ENST00000415541 CT45A8P0DMV1 189 aa6.9□□□□□ -1.3
SIK3-203ENST00000415541 CT45A9P0DMV2 189 aa6.9□□□□□ -1.3
SIK3-203ENST00000415541 NID1P14543 1247 aa6.9□□□□□ -1.3
SIK3-203ENST00000415541 FUT3P21217 361 aa6.9□□□□□ -1.3
SIK3-203ENST00000415541 PPP1CCP36873 323 aaKnown RBP6.9□□□□□ -1.3
SIK3-203ENST00000415541 FAM3BP58499 235 aaPredicted RBP6.9□□□□□ -1.3
SIK3-203ENST00000415541 PRPS1P60891 318 aa6.9□□□□□ -1.3
SIK3-203ENST00000415541 RND3P61587 244 aa6.9□□□□□ -1.3
SIK3-203ENST00000415541 HSPB2Q16082 182 aa6.9□□□□□ -1.3
SIK3-203ENST00000415541 CT45A2Q5DJT8 189 aa6.9□□□□□ -1.3
SIK3-203ENST00000415541 C16orf47Q6ZP98 133 aaPredicted RBP6.9□□□□□ -1.3
SIK3-203ENST00000415541 SLC16A9Q7RTY1 509 aa6.9□□□□□ -1.3
SIK3-203ENST00000415541 LSRQ86X29 649 aaPredicted RBP6.9□□□□□ -1.3
SIK3-203ENST00000415541 HOGA1Q86XE5 327 aa6.9□□□□□ -1.3
SIK3-203ENST00000415541 OR56B2PQ8NGI1 322 aa6.9□□□□□ -1.3
SIK3-203ENST00000415541 MOB3AQ96BX8 217 aa6.9□□□□□ -1.3
SIK3-203ENST00000415541 BTF3L4Q96K17 158 aa6.9□□□□□ -1.3
SIK3-203ENST00000415541 PLK3Q9H4B4 646 aa6.9□□□□□ -1.3
SIK3-203ENST00000415541 C20orf141Q9NUB4 165 aa6.9□□□□□ -1.3
SIK3-203ENST00000415541 HSPB7Q9UBY9 170 aa6.9□□□□□ -1.3
SIK3-203ENST00000415541 SLC7A11Q9UPY5 501 aa6.9□□□□□ -1.3
SIK3-203ENST00000415541 DHDHQ9UQ10 334 aa6.9□□□□□ -1.3
SIK3-203ENST00000415541 OR5G3P0C626 314 aa6.9□□□□□ -1.31
SIK3-203ENST00000415541 HIST1H1CP16403 213 aaKnown RBP6.9□□□□□ -1.31
SIK3-203ENST00000415541 TFPI2P48307 235 aa6.9□□□□□ -1.31
SIK3-203ENST00000415541 DNASE1L1P49184 302 aa6.9□□□□□ -1.31
SIK3-203ENST00000415541 ENDOGQ14249 297 aaKnown RBP6.9□□□□□ -1.31
SIK3-203ENST00000415541 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.9□□□□□ -1.31
SIK3-203ENST00000415541 SLC25A45Q8N413 288 aa6.9□□□□□ -1.31
SIK3-203ENST00000415541 CYB561D1Q8N8Q1 229 aa6.9□□□□□ -1.31
SIK3-203ENST00000415541 OR4C3Q8NH37 302 aa6.9□□□□□ -1.31
SIK3-203ENST00000415541 OR10C1Q96KK4 312 aa6.9□□□□□ -1.31
SIK3-203ENST00000415541 SERINC4A6NH21 518 aa6.89□□□□□ -1.31
SIK3-203ENST00000415541 PGCP20142 388 aa6.89□□□□□ -1.31
SIK3-203ENST00000415541 EPHA8P29322 1005 aaPredicted RBP6.89□□□□□ -1.31
SIK3-203ENST00000415541 ELLP55199 621 aaPredicted RBP6.89□□□□□ -1.31
SIK3-203ENST00000415541 CTXN1P60606 82 aa6.89□□□□□ -1.31
SIK3-203ENST00000415541 ZNF266Q14584 549 aa6.89□□□□□ -1.31
SIK3-203ENST00000415541 GLYATL3Q5SZD4 288 aa6.89□□□□□ -1.31
SIK3-203ENST00000415541 PRAMEF20Q5VT98 475 aa6.89□□□□□ -1.31
SIK3-203ENST00000415541 MAML2Q8IZL2 1156 aaPredicted RBP6.89□□□□□ -1.31
SIK3-203ENST00000415541 OR2G3Q8NGZ4 309 aa6.89□□□□□ -1.31
SIK3-203ENST00000415541 AQP3Q92482 292 aa6.89□□□□□ -1.31
SIK3-203ENST00000415541 PTX4Q96A99 478 aa6.89□□□□□ -1.31
SIK3-203ENST00000415541 SCARF2Q96GP6 870 aaPredicted RBP6.89□□□□□ -1.31
SIK3-203ENST00000415541 RNF2Q99496 336 aa6.89□□□□□ -1.31
SIK3-203ENST00000415541 CENPMQ9NSP4 180 aa6.89□□□□□ -1.31
SIK3-203ENST00000415541 PLA2G2EQ9NZK7 142 aa6.89□□□□□ -1.31
SIK3-203ENST00000415541 FRRS1LQ9P0K9 344 aa6.89□□□□□ -1.31
SIK3-203ENST00000415541 LIPGQ9Y5X9 500 aa6.89□□□□□ -1.31
SIK3-203ENST00000415541 YLPM1P49750 1951 aaKnown RBP6.89□□□□□ -1.31
SIK3-203ENST00000415541 CCL25O15444 150 aa6.89□□□□□ -1.31
SIK3-203ENST00000415541 TNFSF14O43557 240 aa6.89□□□□□ -1.31
SIK3-203ENST00000415541 DEDDO75618 318 aa6.89□□□□□ -1.31
SIK3-203ENST00000415541 UTS2O95399 124 aa6.89□□□□□ -1.31
SIK3-203ENST00000415541 RENP00797 406 aa6.89□□□□□ -1.31
SIK3-203ENST00000415541 ZNF708P17019 499 aa6.89□□□□□ -1.31
SIK3-203ENST00000415541 BMP5P22003 454 aa6.89□□□□□ -1.31
SIK3-203ENST00000415541 RPS4Y1P22090 263 aaKnown RBP6.89□□□□□ -1.31
SIK3-203ENST00000415541 FPR2P25090 351 aa6.89□□□□□ -1.31
SIK3-203ENST00000415541 SFTPDP35247 375 aa6.89□□□□□ -1.31
SIK3-203ENST00000415541 PDLIM4P50479 330 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms