RNA–Protein interactions for RNA: ENST00000415338.1

AC239798.2-201, humanhuman

TSL 1 (best) BASIC

Gene AC239798.2, Length 3,540 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC239798.2-201ENST00000415338 PTGER4P35408 488 aa12.06□□□□□ -0.48
AC239798.2-201ENST00000415338 UBE2NP61088 152 aaKnown RBP12.06□□□□□ -0.48
AC239798.2-201ENST00000415338 CLN3Q13286 438 aa12.06□□□□□ -0.48
AC239798.2-201ENST00000415338 SSPNQ14714 243 aa12.06□□□□□ -0.48
AC239798.2-201ENST00000415338 DCAF10Q5QP82 559 aa12.06□□□□□ -0.48
AC239798.2-201ENST00000415338 EXTL1Q92935 676 aa12.06□□□□□ -0.48
AC239798.2-201ENST00000415338 TAAR9Q96RI9 348 aa12.06□□□□□ -0.48
AC239798.2-201ENST00000415338 RNF150Q9ULK6 438 aa12.06□□□□□ -0.48
AC239798.2-201ENST00000415338 STARD10Q9Y365 291 aa12.06□□□□□ -0.48
AC239798.2-201ENST00000415338 ANKRD30BLA7E2S9 258 aa12.06□□□□□ -0.48
AC239798.2-201ENST00000415338 YKT6O15498 198 aa12.06□□□□□ -0.48
AC239798.2-201ENST00000415338 TK1P04183 234 aa12.06□□□□□ -0.48
AC239798.2-201ENST00000415338 FPR2P25090 351 aa12.06□□□□□ -0.48
AC239798.2-201ENST00000415338 HOXA4Q00056 320 aaPredicted RBP12.06□□□□□ -0.48
AC239798.2-201ENST00000415338 PRDX4Q13162 271 aa12.06□□□□□ -0.48
AC239798.2-201ENST00000415338 GNMTQ14749 295 aa12.06□□□□□ -0.48
AC239798.2-201ENST00000415338 LPCAT3Q6P1A2 487 aa12.06□□□□□ -0.48
AC239798.2-201ENST00000415338 CBLN2Q8IUK8 224 aa12.06□□□□□ -0.48
AC239798.2-201ENST00000415338 CPEB3Q8NE35 698 aaKnown RBP12.06□□□□□ -0.48
AC239798.2-201ENST00000415338 BVESQ8NE79 360 aa12.06□□□□□ -0.48
AC239798.2-201ENST00000415338 OR2M7Q8NG81 312 aa12.06□□□□□ -0.48
AC239798.2-201ENST00000415338 SEMA5BQ9P283 1151 aa12.06□□□□□ -0.48
AC239798.2-201ENST00000415338 PRSS50Q9UI38 385 aa12.06□□□□□ -0.48
AC239798.2-201ENST00000415338 GPR132Q9UNW8 380 aa12.06□□□□□ -0.48
AC239798.2-201ENST00000415338 SERPINE3A8MV23 424 aa12.05□□□□□ -0.48
AC239798.2-201ENST00000415338 KRBOX1C9JBD0 128 aa12.05□□□□□ -0.48
AC239798.2-201ENST00000415338 H0YIZ8 118 aa12.05□□□□□ -0.48
AC239798.2-201ENST00000415338 MT-CO3P00414 261 aa12.05□□□□□ -0.48
AC239798.2-201ENST00000415338 MEOX1P50221 254 aa12.05□□□□□ -0.48
AC239798.2-201ENST00000415338 ACTBL2Q562R1 376 aa12.05□□□□□ -0.48
AC239798.2-201ENST00000415338 TMEM123Q8N131 208 aa12.05□□□□□ -0.48
AC239798.2-201ENST00000415338 CPNE4Q96A23 557 aaPredicted RBP12.05□□□□□ -0.48
AC239798.2-201ENST00000415338 MRGPRFQ96AM1 343 aa12.05□□□□□ -0.48
AC239798.2-201ENST00000415338 FAM234AQ9H0X4 552 aa12.05□□□□□ -0.48
AC239798.2-201ENST00000415338 OBP2BQ9NPH6 170 aa12.05□□□□□ -0.48
AC239798.2-201ENST00000415338 RCL1Q9Y2P8 373 aaKnown RBP12.05□□□□□ -0.48
AC239798.2-201ENST00000415338 OR6C6A6NF89 314 aa12.05□□□□□ -0.48
AC239798.2-201ENST00000415338 FAM74A7A6NL05 159 aa12.05□□□□□ -0.48
AC239798.2-201ENST00000415338 SSSCA1O60232 199 aa12.05□□□□□ -0.48
AC239798.2-201ENST00000415338 WDR1O75083 606 aa12.05□□□□□ -0.48
AC239798.2-201ENST00000415338 TSPAN15O95858 294 aa12.05□□□□□ -0.48
AC239798.2-201ENST00000415338 MPGP29372 298 aa12.05□□□□□ -0.48
AC239798.2-201ENST00000415338 SRSF6Q13247 344 aaKnown RBP12.05□□□□□ -0.48
AC239798.2-201ENST00000415338 FAM74A3Q4VXF1 159 aa12.05□□□□□ -0.48
AC239798.2-201ENST00000415338 FAM213BQ8TBF2 198 aa12.05□□□□□ -0.48
AC239798.2-201ENST00000415338 INTS12Q96CB8 462 aaKnown RBP12.05□□□□□ -0.48
AC239798.2-201ENST00000415338 C2orf50Q96LR7 162 aa12.05□□□□□ -0.48
AC239798.2-201ENST00000415338 WNT5BQ9H1J7 359 aa12.05□□□□□ -0.48
AC239798.2-201ENST00000415338 PPP1R3CQ9UQK1 317 aa12.05□□□□□ -0.48
AC239798.2-201ENST00000415338 IGKV1-27A0A075B6S5 117 aa12.04□□□□□ -0.48
AC239798.2-201ENST00000415338 ZNF816-ZNF321PA0A0X1KG74 233 aa12.04□□□□□ -0.48
AC239798.2-201ENST00000415338 TMEM127O75204 238 aa12.04□□□□□ -0.48
AC239798.2-201ENST00000415338 PVALBP20472 110 aaPredicted RBP12.04□□□□□ -0.48
AC239798.2-201ENST00000415338 FABP6P51161 128 aa12.04□□□□□ -0.48
AC239798.2-201ENST00000415338 SLC10A1Q14973 349 aa12.04□□□□□ -0.48
AC239798.2-201ENST00000415338 MPPED2Q15777 294 aa12.04□□□□□ -0.48
AC239798.2-201ENST00000415338 ZNF239Q16600 458 aaKnown RBP12.04□□□□□ -0.48
AC239798.2-201ENST00000415338 SPAG16Q8N0X2 631 aa12.04□□□□□ -0.48
AC239798.2-201ENST00000415338 TMEM251Q8N6I4 163 aa12.04□□□□□ -0.48
AC239798.2-201ENST00000415338 OR6S1Q8NH40 331 aa12.04□□□□□ -0.48
AC239798.2-201ENST00000415338 TMEM230Q96A57 120 aa12.04□□□□□ -0.48
AC239798.2-201ENST00000415338 CNTNAP3BQ96NU0 1288 aa12.04□□□□□ -0.48
AC239798.2-201ENST00000415338 SLC26A1Q9H2B4 701 aa12.04□□□□□ -0.48
AC239798.2-201ENST00000415338 KCNMB2Q9Y691 235 aa12.04□□□□□ -0.48
AC239798.2-201ENST00000415338 C9orf172C9J069 976 aa12.04□□□□□ -0.48
AC239798.2-201ENST00000415338 SNRNP70P08621 437 aaKnown RBP12.04□□□□□ -0.48
AC239798.2-201ENST00000415338 FHITP49789 147 aa12.04□□□□□ -0.48
AC239798.2-201ENST00000415338 GUCA2BQ16661 112 aa12.04□□□□□ -0.48
AC239798.2-201ENST00000415338 Q6ZRG5 221 aa12.04□□□□□ -0.48
AC239798.2-201ENST00000415338 WDR5BQ86VZ2 330 aa12.04□□□□□ -0.48
AC239798.2-201ENST00000415338 ADPRHL1Q8NDY3 354 aa12.04□□□□□ -0.48
AC239798.2-201ENST00000415338 NABP1Q96AH0 204 aa12.04□□□□□ -0.48
AC239798.2-201ENST00000415338 SYT3Q9BQG1 590 aa12.04□□□□□ -0.48
AC239798.2-201ENST00000415338 TTTY12Q9BZ98 90 aa12.04□□□□□ -0.48
AC239798.2-201ENST00000415338 ALX4Q9H161 411 aaPredicted RBP12.04□□□□□ -0.48
AC239798.2-201ENST00000415338 FBXL17Q9UF56 701 aa12.04□□□□□ -0.48
AC239798.2-201ENST00000415338 FBXO7Q9Y3I1 522 aa12.04□□□□□ -0.48
AC239798.2-201ENST00000415338 USF3Q68DE3 2245 aa12.04□□□□□ -0.48
AC239798.2-201ENST00000415338 F8VVB4 439 aa12.04□□□□□ -0.48
AC239798.2-201ENST00000415338 F8VWA3 439 aa12.04□□□□□ -0.48
AC239798.2-201ENST00000415338 SYNGR1O43759 233 aa12.04□□□□□ -0.48
AC239798.2-201ENST00000415338 B3GALNT1O75752 331 aa12.04□□□□□ -0.48
AC239798.2-201ENST00000415338 AADACP22760 399 aa12.04□□□□□ -0.48
AC239798.2-201ENST00000415338 FKBP2P26885 142 aaKnown RBP12.04□□□□□ -0.48
AC239798.2-201ENST00000415338 RSPO1Q2MKA7 263 aaPredicted RBP12.04□□□□□ -0.48
AC239798.2-201ENST00000415338 RPUSD3Q6P087 351 aaKnown RBP12.04□□□□□ -0.48
AC239798.2-201ENST00000415338 DEFB124Q8NES8 71 aa12.04□□□□□ -0.48
AC239798.2-201ENST00000415338 RNF141Q8WVD5 230 aa12.04□□□□□ -0.48
AC239798.2-201ENST00000415338 KCNE4Q8WWG9 221 aa12.04□□□□□ -0.48
AC239798.2-201ENST00000415338 MARS2Q96GW9 593 aaKnown RBP12.04□□□□□ -0.48
AC239798.2-201ENST00000415338 DUSP13Q9UII6 198 aa12.04□□□□□ -0.48
AC239798.2-201ENST00000415338 NCOR2Q9Y618 2525 aa12.04□□□□□ -0.48
AC239798.2-201ENST00000415338 CD46P15529 392 aa12.03□□□□□ -0.48
AC239798.2-201ENST00000415338 ZNF133P52736 654 aaPredicted RBP12.03□□□□□ -0.48
AC239798.2-201ENST00000415338 SRSF3P84103 164 aaKnown RBP12.03□□□□□ -0.48
AC239798.2-201ENST00000415338 PDZK1IP1Q13113 114 aa12.03□□□□□ -0.48
AC239798.2-201ENST00000415338 TRA2AQ13595 282 aaKnown RBP eCLIP12.03□□□□□ -0.48
AC239798.2-201ENST00000415338 KRBOX4Q5JUW0 171 aa12.03□□□□□ -0.48
AC239798.2-201ENST00000415338 FAM173AQ9BQD7 235 aa12.03□□□□□ -0.48
AC239798.2-201ENST00000415338 CDH20Q9HBT6 801 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms