RNA–Protein interactions for RNA: ENST00000415083.6

SS18-203, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SS18, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-203ENST00000415083 KRBOX4Q5JUW0 171 aa8.52□□□□□ -1.05
SS18-203ENST00000415083 FNDC9Q8TBE3 224 aa8.52□□□□□ -1.05
SS18-203ENST00000415083 WNT5BQ9H1J7 359 aa8.52□□□□□ -1.05
SS18-203ENST00000415083 CRLF2Q9HC73 371 aa8.52□□□□□ -1.05
SS18-203ENST00000415083 SLC2A9Q9NRM0 540 aa8.52□□□□□ -1.05
SS18-203ENST00000415083 P4HTMQ9NXG6 502 aa8.52□□□□□ -1.05
SS18-203ENST00000415083 C14orf166Q9Y224 244 aaKnown RBP8.52□□□□□ -1.05
SS18-203ENST00000415083 hCG_38984A0A1B0GV85 526 aa8.52□□□□□ -1.05
SS18-203ENST00000415083 C5orf52A6NGY3 159 aa8.52□□□□□ -1.05
SS18-203ENST00000415083 TXNL1O43396 289 aa8.52□□□□□ -1.05
SS18-203ENST00000415083 TMEM50AO95807 157 aa8.52□□□□□ -1.05
SS18-203ENST00000415083 EPHA1P21709 976 aa8.52□□□□□ -1.05
SS18-203ENST00000415083 IGFBP4P22692 258 aa8.52□□□□□ -1.05
SS18-203ENST00000415083 MRPS34P82930 218 aaKnown RBP8.52□□□□□ -1.05
SS18-203ENST00000415083 SMCO1Q147U7 214 aa8.52□□□□□ -1.05
SS18-203ENST00000415083 OR5L1Q8NGL2 311 aa8.52□□□□□ -1.05
SS18-203ENST00000415083 TMEM171Q8WVE6 324 aa8.52□□□□□ -1.05
SS18-203ENST00000415083 SCGB3A2Q96PL1 93 aa8.52□□□□□ -1.05
SS18-203ENST00000415083 ZNF700Q9H0M5 742 aa8.52□□□□□ -1.05
SS18-203ENST00000415083 IL36RNQ9UBH0 155 aa8.52□□□□□ -1.05
SS18-203ENST00000415083 PINLYPA6NC86 204 aa8.51□□□□□ -1.05
SS18-203ENST00000415083 ZNF503-AS2A6NEH8 195 aa8.51□□□□□ -1.05
SS18-203ENST00000415083 S100A6P06703 90 aa8.51□□□□□ -1.05
SS18-203ENST00000415083 B4GALT1P15291 398 aa8.51□□□□□ -1.05
SS18-203ENST00000415083 ZNF32P17041 273 aa8.51□□□□□ -1.05
SS18-203ENST00000415083 PAX6P26367 422 aa8.51□□□□□ -1.05
SS18-203ENST00000415083 RBMXP38159 391 aaKnown RBP8.51□□□□□ -1.05
SS18-203ENST00000415083 FXYD4P59646 89 aa8.51□□□□□ -1.05
SS18-203ENST00000415083 AWAT1Q58HT5 328 aa8.51□□□□□ -1.05
SS18-203ENST00000415083 RAET1LQ5VY80 246 aa8.51□□□□□ -1.05
SS18-203ENST00000415083 SLC22A25Q6T423 547 aa8.51□□□□□ -1.05
SS18-203ENST00000415083 ZNF295-AS1Q8N0V1 137 aa8.51□□□□□ -1.05
SS18-203ENST00000415083 FBXL14Q8N1E6 418 aa8.51□□□□□ -1.05
SS18-203ENST00000415083 PLPPR1Q8TBJ4 325 aa8.51□□□□□ -1.05
SS18-203ENST00000415083 RTN4IP1Q8WWV3 396 aaPredicted RBP8.51□□□□□ -1.05
SS18-203ENST00000415083 ADGRG7Q96K78 797 aa8.51□□□□□ -1.05
SS18-203ENST00000415083 ALKBH3Q96Q83 286 aaPredicted RBP8.51□□□□□ -1.05
SS18-203ENST00000415083 RARRES2Q99969 163 aa8.51□□□□□ -1.05
SS18-203ENST00000415083 A6NLC8 198 aa8.51□□□□□ -1.05
SS18-203ENST00000415083 ATXN7O15265 892 aaPredicted RBP8.51□□□□□ -1.05
SS18-203ENST00000415083 FABP1P07148 127 aa8.51□□□□□ -1.05
SS18-203ENST00000415083 AGAP20933 346 aa8.51□□□□□ -1.05
SS18-203ENST00000415083 HERPUD1Q15011 391 aa8.51□□□□□ -1.05
SS18-203ENST00000415083 FAM209BQ5JX69 171 aa8.51□□□□□ -1.05
SS18-203ENST00000415083 SGPP2Q8IWX5 399 aa8.51□□□□□ -1.05
SS18-203ENST00000415083 CPEB3Q8NE35 698 aaKnown RBP8.51□□□□□ -1.05
SS18-203ENST00000415083 ULBP2Q9BZM5 246 aa8.51□□□□□ -1.05
SS18-203ENST00000415083 TMEM38BQ9NVV0 291 aa8.51□□□□□ -1.05
SS18-203ENST00000415083 ESPL1Q14674 2120 aa8.51□□□□□ -1.05
SS18-203ENST00000415083 hCG_1809904A0A1W2PP81 198 aa8.51□□□□□ -1.05
SS18-203ENST00000415083 A0A1W2PPH5 198 aa8.51□□□□□ -1.05
SS18-203ENST00000415083 A0A1W2PR64 198 aa8.51□□□□□ -1.05
SS18-203ENST00000415083 A0A1W2PRV1 198 aa8.51□□□□□ -1.05
SS18-203ENST00000415083 FGF5P12034 268 aa8.51□□□□□ -1.05
SS18-203ENST00000415083 AADACP22760 399 aa8.51□□□□□ -1.05
SS18-203ENST00000415083 DSCR4P56555 118 aaPredicted RBP8.51□□□□□ -1.05
SS18-203ENST00000415083 OR2B8PP59922 312 aa8.51□□□□□ -1.05
SS18-203ENST00000415083 PPA1Q15181 289 aa8.51□□□□□ -1.05
SS18-203ENST00000415083 LIAT1Q6ZQX7 453 aa8.51□□□□□ -1.05
SS18-203ENST00000415083 SPEM1Q8N4L4 309 aa8.51□□□□□ -1.05
SS18-203ENST00000415083 SLC35G3Q8N808 338 aa8.51□□□□□ -1.05
SS18-203ENST00000415083 DEPPQ9NTK1 212 aa8.51□□□□□ -1.05
SS18-203ENST00000415083 TNRC6AQ8NDV7 1962 aaKnown RBP8.5□□□□□ -1.05
SS18-203ENST00000415083 IGSF23A1L1A6 192 aa8.5□□□□□ -1.05
SS18-203ENST00000415083 LRRC3CA6NJW4 275 aa8.5□□□□□ -1.05
SS18-203ENST00000415083 JTBO76095 146 aa8.5□□□□□ -1.05
SS18-203ENST00000415083 ARG1P05089 322 aa8.5□□□□□ -1.05
SS18-203ENST00000415083 ZNF728P0DKX0 622 aa8.5□□□□□ -1.05
SS18-203ENST00000415083 SPINK2P20155 84 aa8.5□□□□□ -1.05
SS18-203ENST00000415083 DTYMKP23919 212 aa8.5□□□□□ -1.05
SS18-203ENST00000415083 GNRHRP30968 328 aa8.5□□□□□ -1.05
SS18-203ENST00000415083 SPSB3Q6PJ21 355 aa8.5□□□□□ -1.05
SS18-203ENST00000415083 YRDCQ86U90 279 aaKnown RBP8.5□□□□□ -1.05
SS18-203ENST00000415083 MAML2Q8IZL2 1156 aaPredicted RBP8.5□□□□□ -1.05
SS18-203ENST00000415083 GPR137CQ8N3F9 429 aa8.5□□□□□ -1.05
SS18-203ENST00000415083 OR1F12Q8NHA8 337 aa8.5□□□□□ -1.05
SS18-203ENST00000415083 MOB3AQ96BX8 217 aa8.5□□□□□ -1.05
SS18-203ENST00000415083 C10orf35Q96D05 121 aa8.5□□□□□ -1.05
SS18-203ENST00000415083 JSRP1Q96MG2 331 aaPredicted RBP8.5□□□□□ -1.05
SS18-203ENST00000415083 IGKV1-6A0A0C4DH72 117 aa8.5□□□□□ -1.05
SS18-203ENST00000415083 C7orf77A4D0Y5 90 aa8.5□□□□□ -1.05
SS18-203ENST00000415083 NPIPA2E9PIF3 369 aa8.5□□□□□ -1.05
SS18-203ENST00000415083 NPIPA3F8WFD2 350 aa8.5□□□□□ -1.05
SS18-203ENST00000415083 K7N7A8 449 aa8.5□□□□□ -1.05
SS18-203ENST00000415083 M0R036 132 aa8.5□□□□□ -1.05
SS18-203ENST00000415083 MMP7P09237 267 aaPredicted RBP8.5□□□□□ -1.05
SS18-203ENST00000415083 PET100P0DJ07 73 aa8.5□□□□□ -1.05
SS18-203ENST00000415083 P2RY1P47900 373 aa8.5□□□□□ -1.05
SS18-203ENST00000415083 FOXG1P55316 489 aaPredicted RBP8.5□□□□□ -1.05
SS18-203ENST00000415083 FABP9Q0Z7S8 132 aa8.5□□□□□ -1.05
SS18-203ENST00000415083 RAB35Q15286 201 aa8.5□□□□□ -1.05
SS18-203ENST00000415083 IGFBP7Q16270 282 aa8.5□□□□□ -1.05
SS18-203ENST00000415083 HAGHQ16775 308 aa8.5□□□□□ -1.05
SS18-203ENST00000415083 EIF2S3LQ2VIR3 472 aaKnown RBP8.5□□□□□ -1.05
SS18-203ENST00000415083 OPN5Q6U736 354 aa8.5□□□□□ -1.05
SS18-203ENST00000415083 SKA3Q8IX90 412 aa8.5□□□□□ -1.05
SS18-203ENST00000415083 CLDN23Q96B33 292 aa8.5□□□□□ -1.05
SS18-203ENST00000415083 METTL9Q9H1A3 318 aa8.5□□□□□ -1.05
SS18-203ENST00000415083 UBE2ZQ9H832 354 aaPredicted RBP8.5□□□□□ -1.05
SS18-203ENST00000415083 GSN-AS1Q9NRJ2 163 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms