RNA–Protein interactions for RNA: ENST00000414829.2

LIMS1-206, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-206ENST00000414829 hCG_1809904A0A1W2PP81 198 aa12.13□□□□□ -0.47
LIMS1-206ENST00000414829 A0A1W2PPE2 198 aa12.13□□□□□ -0.47
LIMS1-206ENST00000414829 A0A1W2PQ09 198 aa12.13□□□□□ -0.47
LIMS1-206ENST00000414829 A0A1W2PR64 198 aa12.13□□□□□ -0.47
LIMS1-206ENST00000414829 A0A1W2PRV1 198 aa12.13□□□□□ -0.47
LIMS1-206ENST00000414829 FUOMA2VDF0 154 aa12.13□□□□□ -0.47
LIMS1-206ENST00000414829 GABRPO00591 440 aa12.13□□□□□ -0.47
LIMS1-206ENST00000414829 ANGPTL7O43827 346 aa12.13□□□□□ -0.47
LIMS1-206ENST00000414829 TNFAIP8O95379 198 aa12.13□□□□□ -0.47
LIMS1-206ENST00000414829 HOXB4P17483 251 aaPredicted RBP12.13□□□□□ -0.47
LIMS1-206ENST00000414829 AMY2BP19961 511 aa12.13□□□□□ -0.47
LIMS1-206ENST00000414829 GALP22466 123 aa12.13□□□□□ -0.47
LIMS1-206ENST00000414829 UBE2UQ5VVX9 321 aa12.13□□□□□ -0.47
LIMS1-206ENST00000414829 ELP2Q6IA86 826 aa12.13□□□□□ -0.47
LIMS1-206ENST00000414829 LINC00596Q86U02 117 aa12.13□□□□□ -0.47
LIMS1-206ENST00000414829 PHC2Q8IXK0 858 aa12.13□□□□□ -0.47
LIMS1-206ENST00000414829 JAGN1Q8N5M9 183 aa12.13□□□□□ -0.47
LIMS1-206ENST00000414829 CD177Q8N6Q3 437 aa12.13□□□□□ -0.47
LIMS1-206ENST00000414829 ZNRF1Q8ND25 227 aa12.13□□□□□ -0.47
LIMS1-206ENST00000414829 UPRTQ96BW1 309 aa12.13□□□□□ -0.47
LIMS1-206ENST00000414829 CNTD2Q9H8S5 307 aa12.13□□□□□ -0.47
LIMS1-206ENST00000414829 GHRLQ9UBU3 117 aa12.13□□□□□ -0.47
LIMS1-206ENST00000414829 SONP18583 2426 aaKnown RBP12.13□□□□□ -0.47
LIMS1-206ENST00000414829 TRAV8-7A0A075B6U6 113 aa12.12□□□□□ -0.47
LIMS1-206ENST00000414829 H3BUI4 141 aa12.12□□□□□ -0.47
LIMS1-206ENST00000414829 M0R1W7 72 aa12.12□□□□□ -0.47
LIMS1-206ENST00000414829 SC5DO75845 299 aa12.12□□□□□ -0.47
LIMS1-206ENST00000414829 TK1P04183 234 aa12.12□□□□□ -0.47
LIMS1-206ENST00000414829 UCHL1P09936 223 aa12.12□□□□□ -0.47
LIMS1-206ENST00000414829 ADRA2CP18825 462 aa12.12□□□□□ -0.47
LIMS1-206ENST00000414829 FPR2P25090 351 aa12.12□□□□□ -0.47
LIMS1-206ENST00000414829 MAP2K4P45985 399 aa12.12□□□□□ -0.47
LIMS1-206ENST00000414829 COL10A1Q03692 680 aa12.12□□□□□ -0.47
LIMS1-206ENST00000414829 EMX1Q04741 257 aaPredicted RBP12.12□□□□□ -0.47
LIMS1-206ENST00000414829 IL13RA2Q14627 380 aa12.12□□□□□ -0.47
LIMS1-206ENST00000414829 PDCD1Q15116 288 aa12.12□□□□□ -0.47
LIMS1-206ENST00000414829 GLT8D1Q68CQ7 371 aa12.12□□□□□ -0.47
LIMS1-206ENST00000414829 ASPHD2Q6ICH7 369 aa12.12□□□□□ -0.47
LIMS1-206ENST00000414829 UNQ9370/PRO34162Q6UXP9 181 aa12.12□□□□□ -0.47
LIMS1-206ENST00000414829 GDPD3Q7L5L3 318 aa12.12□□□□□ -0.47
LIMS1-206ENST00000414829 CEACAM19Q7Z692 300 aa12.12□□□□□ -0.47
LIMS1-206ENST00000414829 SPARTQ8N0X7 666 aa12.12□□□□□ -0.47
LIMS1-206ENST00000414829 OR8H2Q8N162 312 aa12.12□□□□□ -0.47
LIMS1-206ENST00000414829 LY6G5BQ8NDX9 201 aa12.12□□□□□ -0.47
LIMS1-206ENST00000414829 MRPS24Q96EL2 167 aaKnown RBP12.12□□□□□ -0.47
LIMS1-206ENST00000414829 POM121Q96HA1 1249 aa12.12□□□□□ -0.47
LIMS1-206ENST00000414829 SNX22Q96L94 193 aa12.12□□□□□ -0.47
LIMS1-206ENST00000414829 WDFY2Q96P53 400 aa12.12□□□□□ -0.47
LIMS1-206ENST00000414829 NDUFB11Q9NX14 153 aa12.12□□□□□ -0.47
LIMS1-206ENST00000414829 OPN4Q9UHM6 478 aa12.12□□□□□ -0.47
LIMS1-206ENST00000414829 MAB21L2Q9Y586 359 aa12.12□□□□□ -0.47
LIMS1-206ENST00000414829 MALRD1Q5VYJ5 2156 aa12.12□□□□□ -0.47
LIMS1-206ENST00000414829 C2CD3Q4AC94 2353 aa12.12□□□□□ -0.47
LIMS1-206ENST00000414829 NAV3Q8IVL0 2385 aa12.12□□□□□ -0.47
LIMS1-206ENST00000414829 ABCA2Q9BZC7 2435 aa12.11□□□□□ -0.47
LIMS1-206ENST00000414829 IGKV1-12A0A0C4DH73 117 aa12.11□□□□□ -0.47
LIMS1-206ENST00000414829 A0A1B0GW55 424 aa12.11□□□□□ -0.47
LIMS1-206ENST00000414829 K7N7A8 449 aa12.11□□□□□ -0.47
LIMS1-206ENST00000414829 CCRL2O00421 344 aa12.11□□□□□ -0.47
LIMS1-206ENST00000414829 TOX4O94842 621 aa12.11□□□□□ -0.47
LIMS1-206ENST00000414829 IGKV1D-12P01611 117 aa12.11□□□□□ -0.47
LIMS1-206ENST00000414829 UBBP0CG47 229 aa12.11□□□□□ -0.47
LIMS1-206ENST00000414829 DUX4L2P0CJ85 424 aa12.11□□□□□ -0.47
LIMS1-206ENST00000414829 DUX4L3P0CJ86 424 aa12.11□□□□□ -0.47
LIMS1-206ENST00000414829 DUX4L4P0CJ87 422 aa12.11□□□□□ -0.47
LIMS1-206ENST00000414829 DUX4L5P0CJ88 424 aa12.11□□□□□ -0.47
LIMS1-206ENST00000414829 DUX4L6P0CJ89 424 aa12.11□□□□□ -0.47
LIMS1-206ENST00000414829 DUX4L7P0CJ90 424 aa12.11□□□□□ -0.47
LIMS1-206ENST00000414829 EPHA1P21709 976 aa12.11□□□□□ -0.47
LIMS1-206ENST00000414829 GABRR1P24046 479 aa12.11□□□□□ -0.47
LIMS1-206ENST00000414829 PSMB9P28065 219 aa12.11□□□□□ -0.47
LIMS1-206ENST00000414829 NPBWR2P48146 333 aa12.11□□□□□ -0.47
LIMS1-206ENST00000414829 PSMD7P51665 324 aa12.11□□□□□ -0.47
LIMS1-206ENST00000414829 RPL31P62899 125 aaKnown RBP12.11□□□□□ -0.47
LIMS1-206ENST00000414829 NHLRC3Q5JS37 347 aa12.11□□□□□ -0.47
LIMS1-206ENST00000414829 GPR157Q5UAW9 335 aa12.11□□□□□ -0.47
LIMS1-206ENST00000414829 DUX4L9Q6RFH8 374 aaPredicted RBP12.11□□□□□ -0.47
LIMS1-206ENST00000414829 ASCL4Q6XD76 172 aa12.11□□□□□ -0.47
LIMS1-206ENST00000414829 C1orf122Q6ZSJ8 110 aa12.11□□□□□ -0.47
LIMS1-206ENST00000414829 IL17RELQ6ZVW7 336 aa12.11□□□□□ -0.47
LIMS1-206ENST00000414829 ONECUT1Q9UBC0 465 aa12.11□□□□□ -0.47
LIMS1-206ENST00000414829 DUX4Q9UBX2 424 aa12.11□□□□□ -0.47
LIMS1-206ENST00000414829 NUP50Q9UKX7 468 aa12.11□□□□□ -0.47
LIMS1-206ENST00000414829 GSTK1Q9Y2Q3 226 aa12.11□□□□□ -0.47
LIMS1-206ENST00000414829 A0A0A6YYJ9 748 aa12.1□□□□□ -0.47
LIMS1-206ENST00000414829 A0A1W2PPK0 400 aa12.1□□□□□ -0.47
LIMS1-206ENST00000414829 MGST3O14880 152 aa12.1□□□□□ -0.47
LIMS1-206ENST00000414829 ZNF737O75373 536 aa12.1□□□□□ -0.47
LIMS1-206ENST00000414829 INMTO95050 263 aa12.1□□□□□ -0.47
LIMS1-206ENST00000414829 FSHBP01225 129 aa12.1□□□□□ -0.47
LIMS1-206ENST00000414829 MAS1P04201 325 aa12.1□□□□□ -0.47
LIMS1-206ENST00000414829 SFTPBP07988 381 aa12.1□□□□□ -0.47
LIMS1-206ENST00000414829 GTF2F2P13984 249 aa12.1□□□□□ -0.47
LIMS1-206ENST00000414829 SELLP14151 372 aa12.1□□□□□ -0.47
LIMS1-206ENST00000414829 ZNF44P15621 663 aa12.1□□□□□ -0.47
LIMS1-206ENST00000414829 SRMP19623 302 aa12.1□□□□□ -0.47
LIMS1-206ENST00000414829 OR3A4PP47883 348 aa12.1□□□□□ -0.47
LIMS1-206ENST00000414829 KCNJ3P48549 501 aa12.1□□□□□ -0.47
LIMS1-206ENST00000414829 GUCA2AQ02747 115 aa12.1□□□□□ -0.47
LIMS1-206ENST00000414829 KRTAP21-3Q3LHN1 58 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms