RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 FUOMA2VDF0 154 aa12.14□□□□□ -0.47
CHD1-202ENST00000414220 K7N7A8 449 aa12.14□□□□□ -0.47
CHD1-202ENST00000414220 M0R1W7 72 aa12.14□□□□□ -0.47
CHD1-202ENST00000414220 ANGPTL7O43827 346 aa12.14□□□□□ -0.47
CHD1-202ENST00000414220 HAND1O96004 215 aa12.14□□□□□ -0.47
CHD1-202ENST00000414220 IGHV4-38-2P0DP08 117 aa12.14□□□□□ -0.47
CHD1-202ENST00000414220 GABRR1P24046 479 aa12.14□□□□□ -0.47
CHD1-202ENST00000414220 ZNF93P35789 620 aaPredicted RBP12.14□□□□□ -0.47
CHD1-202ENST00000414220 NPBWR2P48146 333 aa12.14□□□□□ -0.47
CHD1-202ENST00000414220 MTNR1BP49286 362 aa12.14□□□□□ -0.47
CHD1-202ENST00000414220 HILS1P60008 231 aa12.14□□□□□ -0.47
CHD1-202ENST00000414220 GPR50Q13585 617 aa12.14□□□□□ -0.47
CHD1-202ENST00000414220 KLF17Q5JT82 389 aaPredicted RBP12.14□□□□□ -0.47
CHD1-202ENST00000414220 NCR3LG1Q68D85 454 aa12.14□□□□□ -0.47
CHD1-202ENST00000414220 C9orf139Q6ZV77 190 aa12.14□□□□□ -0.47
CHD1-202ENST00000414220 PXT1Q8NFP0 134 aa12.14□□□□□ -0.47
CHD1-202ENST00000414220 ZFAND2BQ8WV99 257 aa12.14□□□□□ -0.47
CHD1-202ENST00000414220 TNFAIP8L1Q8WVP5 186 aa12.14□□□□□ -0.47
CHD1-202ENST00000414220 C22orf15Q8WYQ4 148 aa12.14□□□□□ -0.47
CHD1-202ENST00000414220 RGP1Q92546 391 aaPredicted RBP12.14□□□□□ -0.47
CHD1-202ENST00000414220 UFD1Q92890 307 aa12.14□□□□□ -0.47
CHD1-202ENST00000414220 LHX4Q969G2 390 aa12.14□□□□□ -0.47
CHD1-202ENST00000414220 ZDHHC16Q969W1 377 aa12.14□□□□□ -0.47
CHD1-202ENST00000414220 PGLYRP3Q96LB9 341 aa12.14□□□□□ -0.47
CHD1-202ENST00000414220 SLC6A7Q99884 636 aa12.14□□□□□ -0.47
CHD1-202ENST00000414220 SIRPDQ9H106 197 aa12.14□□□□□ -0.47
CHD1-202ENST00000414220 METTL8Q9H825 291 aaKnown RBP12.14□□□□□ -0.47
CHD1-202ENST00000414220 HMG20AQ9NP66 347 aa12.14□□□□□ -0.47
CHD1-202ENST00000414220 RBFOX1Q9NWB1 397 aaKnown RBP12.14□□□□□ -0.47
CHD1-202ENST00000414220 ZNF69Q9UC07 566 aa12.14□□□□□ -0.47
CHD1-202ENST00000414220 FOXJ3Q9UPW0 622 aa12.14□□□□□ -0.47
CHD1-202ENST00000414220 GSTK1Q9Y2Q3 226 aa12.14□□□□□ -0.47
CHD1-202ENST00000414220 ARHGAP32A7KAX9 2087 aa12.14□□□□□ -0.47
CHD1-202ENST00000414220 IGHV3OR16-10A0A075B7F0 116 aa12.13□□□□□ -0.47
CHD1-202ENST00000414220 ZNF780AO75290 641 aaPredicted RBP12.13□□□□□ -0.47
CHD1-202ENST00000414220 GPX5O75715 221 aa12.13□□□□□ -0.47
CHD1-202ENST00000414220 CSTBP04080 98 aaKnown RBP12.13□□□□□ -0.47
CHD1-202ENST00000414220 TFF1P04155 84 aa12.13□□□□□ -0.47
CHD1-202ENST00000414220 CRHBPP24387 322 aa12.13□□□□□ -0.47
CHD1-202ENST00000414220 TGFBR2P37173 567 aa12.13□□□□□ -0.47
CHD1-202ENST00000414220 CEBPDP49716 269 aaPredicted RBP12.13□□□□□ -0.47
CHD1-202ENST00000414220 ZNF146Q15072 292 aa12.13□□□□□ -0.47
CHD1-202ENST00000414220 RSU1Q15404 277 aa12.13□□□□□ -0.47
CHD1-202ENST00000414220 DDI2Q5TDH0 399 aa12.13□□□□□ -0.47
CHD1-202ENST00000414220 ZNF529Q6P280 563 aa12.13□□□□□ -0.47
CHD1-202ENST00000414220 PRSS48Q7RTY5 328 aa12.13□□□□□ -0.47
CHD1-202ENST00000414220 VMO1Q7Z5L0 202 aa12.13□□□□□ -0.47
CHD1-202ENST00000414220 FGFRL1Q8N441 504 aa12.13□□□□□ -0.47
CHD1-202ENST00000414220 METTL9Q9H1A3 318 aa12.13□□□□□ -0.47
CHD1-202ENST00000414220 ZMAT3Q9HA38 289 aaKnown RBP12.13□□□□□ -0.47
CHD1-202ENST00000414220 hADV38S2A0JD32 116 aa12.12□□□□□ -0.47
CHD1-202ENST00000414220 MEGF11A6BM72 1044 aa12.12□□□□□ -0.47
CHD1-202ENST00000414220 F8VVB4 439 aa12.12□□□□□ -0.47
CHD1-202ENST00000414220 F8VWA3 439 aa12.12□□□□□ -0.47
CHD1-202ENST00000414220 MRPS14O60783 128 aaKnown RBP12.12□□□□□ -0.47
CHD1-202ENST00000414220 FCN3O75636 299 aa12.12□□□□□ -0.47
CHD1-202ENST00000414220 SFTPBP07988 381 aa12.12□□□□□ -0.47
CHD1-202ENST00000414220 MMP9P14780 707 aa12.12□□□□□ -0.47
CHD1-202ENST00000414220 ZNF44P15621 663 aa12.12□□□□□ -0.47
CHD1-202ENST00000414220 SNU13P55769 128 aaKnown RBP12.12□□□□□ -0.47
CHD1-202ENST00000414220 EDDM3BP56851 147 aa12.12□□□□□ -0.47
CHD1-202ENST00000414220 BAMBIQ13145 260 aa12.12□□□□□ -0.47
CHD1-202ENST00000414220 DOC2BQ14184 412 aa12.12□□□□□ -0.47
CHD1-202ENST00000414220 GPR176Q14439 515 aa12.12□□□□□ -0.47
CHD1-202ENST00000414220 TRAM1Q15629 374 aa12.12□□□□□ -0.47
CHD1-202ENST00000414220 GRK1Q15835 563 aa12.12□□□□□ -0.47
CHD1-202ENST00000414220 CDH26Q8IXH8 852 aa12.12□□□□□ -0.47
CHD1-202ENST00000414220 OR8H2Q8N162 312 aa12.12□□□□□ -0.47
CHD1-202ENST00000414220 CHST4Q8NCG5 386 aa12.12□□□□□ -0.47
CHD1-202ENST00000414220 OR52N4Q8NGI2 321 aa12.12□□□□□ -0.47
CHD1-202ENST00000414220 OR14A2Q96R54 314 aa12.12□□□□□ -0.47
CHD1-202ENST00000414220 TBX15Q96SF7 602 aa12.12□□□□□ -0.47
CHD1-202ENST00000414220 TCF7L1Q9HCS4 588 aa12.12□□□□□ -0.47
CHD1-202ENST00000414220 ISYNA1Q9NPH2 558 aa12.12□□□□□ -0.47
CHD1-202ENST00000414220 ING4Q9UNL4 249 aa12.12□□□□□ -0.47
CHD1-202ENST00000414220 IGHV1-69DA0A0B4J2H0 117 aa12.11□□□□□ -0.47
CHD1-202ENST00000414220 CENPVL3A0A0U1RRI6 287 aa12.11□□□□□ -0.47
CHD1-202ENST00000414220 GABRPO00591 440 aa12.11□□□□□ -0.47
CHD1-202ENST00000414220 MGST3O14880 152 aa12.11□□□□□ -0.47
CHD1-202ENST00000414220 DEGS1O15121 323 aa12.11□□□□□ -0.47
CHD1-202ENST00000414220 DENRO43583 198 aaKnown RBP12.11□□□□□ -0.47
CHD1-202ENST00000414220 RGS9O75916 674 aaPredicted RBP12.11□□□□□ -0.47
CHD1-202ENST00000414220 IGHV1-69P01742 117 aa12.11□□□□□ -0.47
CHD1-202ENST00000414220 HSMCR30P0CW71 290 aa12.11□□□□□ -0.47
CHD1-202ENST00000414220 FSTP19883 344 aa12.11□□□□□ -0.47
CHD1-202ENST00000414220 PRTN3P24158 256 aa12.11□□□□□ -0.47
CHD1-202ENST00000414220 PSMA1P25786 263 aaKnown RBP12.11□□□□□ -0.47
CHD1-202ENST00000414220 PTGFRP43088 359 aa12.11□□□□□ -0.47
CHD1-202ENST00000414220 ZP1P60852 638 aa12.11□□□□□ -0.47
CHD1-202ENST00000414220 RPS11P62280 158 aaKnown RBP eCLIP12.11□□□□□ -0.47
CHD1-202ENST00000414220 MEF2CQ06413 473 aaPredicted RBP12.11□□□□□ -0.47
CHD1-202ENST00000414220 IRF3Q14653 427 aa12.11□□□□□ -0.47
CHD1-202ENST00000414220 ELP2Q6IA86 826 aa12.11□□□□□ -0.47
CHD1-202ENST00000414220 METAP1DQ6UB28 335 aaPredicted RBP12.11□□□□□ -0.47
CHD1-202ENST00000414220 SIGLECL1Q8N7X8 197 aa12.11□□□□□ -0.47
CHD1-202ENST00000414220 NKAIN3Q8N8D7 197 aa12.11□□□□□ -0.47
CHD1-202ENST00000414220 OR4M1Q8NGD0 313 aa12.11□□□□□ -0.47
CHD1-202ENST00000414220 OR51A2Q8NGJ7 313 aa12.11□□□□□ -0.47
CHD1-202ENST00000414220 OR13C5Q8NGS8 318 aa12.11□□□□□ -0.47
CHD1-202ENST00000414220 YTHDF1Q9BYJ9 559 aaKnown RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms