RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 DNAJC4Q9NNZ3 241 aa8.2□□□□□ -1.1
SNHG3-201ENST00000413987 GPR173Q9NS66 373 aa8.2□□□□□ -1.1
SNHG3-201ENST00000413987 FGF21Q9NSA1 209 aa8.2□□□□□ -1.1
SNHG3-201ENST00000413987 UQCC1Q9NVA1 299 aa8.2□□□□□ -1.1
SNHG3-201ENST00000413987 PLEKHJ1Q9NW61 149 aa8.2□□□□□ -1.1
SNHG3-201ENST00000413987 OCIAD1Q9NX40 245 aa8.2□□□□□ -1.1
SNHG3-201ENST00000413987 SPTBN2O15020 2390 aa8.2□□□□□ -1.1
SNHG3-201ENST00000413987 ELOA3CA0A087WX78 387 aaPredicted RBP8.19□□□□□ -1.1
SNHG3-201ENST00000413987 TRBV7-9A0A0J9YWB2 115 aa8.19□□□□□ -1.1
SNHG3-201ENST00000413987 A0A1B0GTI1 187 aa8.19□□□□□ -1.1
SNHG3-201ENST00000413987 RNF222A6NCQ9 220 aa8.19□□□□□ -1.1
SNHG3-201ENST00000413987 A6NIZ1 184 aa8.19□□□□□ -1.1
SNHG3-201ENST00000413987 ELOA3DA6NLF2 546 aaPredicted RBP8.19□□□□□ -1.1
SNHG3-201ENST00000413987 MS4A18H0YCH9 400 aa8.19□□□□□ -1.1
SNHG3-201ENST00000413987 TXNDC12O95881 172 aa8.19□□□□□ -1.1
SNHG3-201ENST00000413987 TPT1P13693 172 aaKnown RBP8.19□□□□□ -1.1
SNHG3-201ENST00000413987 PMELP40967 661 aa8.19□□□□□ -1.1
SNHG3-201ENST00000413987 PLP1P60201 277 aa8.19□□□□□ -1.1
SNHG3-201ENST00000413987 UBE2MP61081 183 aaKnown RBP8.19□□□□□ -1.1
SNHG3-201ENST00000413987 TP53I3Q53FA7 332 aa8.19□□□□□ -1.1
SNHG3-201ENST00000413987 LY6G6FQ5SQ64 297 aa8.19□□□□□ -1.1
SNHG3-201ENST00000413987 RBMS3Q6XE24 437 aaKnown RBP8.19□□□□□ -1.1
SNHG3-201ENST00000413987 OLIG3Q7RTU3 272 aa8.19□□□□□ -1.1
SNHG3-201ENST00000413987 HMGN2P46Q86SG4 172 aa8.19□□□□□ -1.1
SNHG3-201ENST00000413987 CA13Q8N1Q1 262 aa8.19□□□□□ -1.1
SNHG3-201ENST00000413987 WDR13Q9H1Z4 485 aa8.19□□□□□ -1.1
SNHG3-201ENST00000413987 TMPRSS5Q9H3S3 457 aa8.19□□□□□ -1.1
SNHG3-201ENST00000413987 SLC7A7Q9UM01 511 aa8.19□□□□□ -1.1
SNHG3-201ENST00000413987 PTPRZ1P23471 2315 aaPredicted RBP8.19□□□□□ -1.1
SNHG3-201ENST00000413987 SPENQ96T58 3664 aaKnown RBP8.19□□□□□ -1.1
SNHG3-201ENST00000413987 FGF17O60258 216 aa8.19□□□□□ -1.1
SNHG3-201ENST00000413987 HMGN2P05204 90 aaKnown RBP8.19□□□□□ -1.1
SNHG3-201ENST00000413987 GTF2F2P13984 249 aa8.19□□□□□ -1.1
SNHG3-201ENST00000413987 RBX1P62877 108 aa8.19□□□□□ -1.1
SNHG3-201ENST00000413987 BTG2P78543 158 aa8.19□□□□□ -1.1
SNHG3-201ENST00000413987 FOXE3Q13461 319 aa8.19□□□□□ -1.1
SNHG3-201ENST00000413987 INPP5JQ15735 1006 aaPredicted RBP8.19□□□□□ -1.1
SNHG3-201ENST00000413987 EIPR1Q53HC9 387 aa8.19□□□□□ -1.1
SNHG3-201ENST00000413987 ADAM5Q6NVV9 412 aa8.19□□□□□ -1.1
SNHG3-201ENST00000413987 SHISA6Q6ZSJ9 500 aa8.19□□□□□ -1.1
SNHG3-201ENST00000413987 H2BFWTQ7Z2G1 175 aa8.19□□□□□ -1.1
SNHG3-201ENST00000413987 RANBP3LQ86VV4 465 aaPredicted RBP8.19□□□□□ -1.1
SNHG3-201ENST00000413987 DND1Q8IYX4 353 aaKnown RBP8.19□□□□□ -1.1
SNHG3-201ENST00000413987 D2HGDHQ8N465 521 aa8.19□□□□□ -1.1
SNHG3-201ENST00000413987 OR9A2Q8NGT5 310 aa8.19□□□□□ -1.1
SNHG3-201ENST00000413987 EDARADDQ8WWZ3 215 aa8.19□□□□□ -1.1
SNHG3-201ENST00000413987 CDS1Q92903 461 aa8.19□□□□□ -1.1
SNHG3-201ENST00000413987 ZNF501Q96CX3 271 aaPredicted RBP8.19□□□□□ -1.1
SNHG3-201ENST00000413987 OR7D2Q96RA2 312 aa8.19□□□□□ -1.1
SNHG3-201ENST00000413987 GFI1Q99684 422 aa8.19□□□□□ -1.1
SNHG3-201ENST00000413987 ZNF223Q9UK11 482 aaPredicted RBP8.19□□□□□ -1.1
SNHG3-201ENST00000413987 CES1P1Q9UKY3 287 aa8.19□□□□□ -1.1
SNHG3-201ENST00000413987 RNF223E7ERA6 249 aa8.18□□□□□ -1.1
SNHG3-201ENST00000413987 M0QZK8 103 aa8.18□□□□□ -1.1
SNHG3-201ENST00000413987 TCAPO15273 167 aa8.18□□□□□ -1.1
SNHG3-201ENST00000413987 FADS1O60427 444 aa8.18□□□□□ -1.1
SNHG3-201ENST00000413987 SRPX2O60687 465 aaPredicted RBP8.18□□□□□ -1.1
SNHG3-201ENST00000413987 NTN1O95631 604 aa8.18□□□□□ -1.1
SNHG3-201ENST00000413987 MT-ND4LP03901 98 aa8.18□□□□□ -1.1
SNHG3-201ENST00000413987 THY1P04216 161 aa8.18□□□□□ -1.1
SNHG3-201ENST00000413987 CCL4P13236 92 aa8.18□□□□□ -1.1
SNHG3-201ENST00000413987 HLA-GP17693 338 aa8.18□□□□□ -1.1
SNHG3-201ENST00000413987 MAOAP21397 527 aa8.18□□□□□ -1.1
SNHG3-201ENST00000413987 ITPKBP27987 946 aa8.18□□□□□ -1.1
SNHG3-201ENST00000413987 EFNA3P52797 238 aa8.18□□□□□ -1.1
SNHG3-201ENST00000413987 AKR1C2P52895 323 aa8.18□□□□□ -1.1
SNHG3-201ENST00000413987 AKR1C1Q04828 323 aa8.18□□□□□ -1.1
SNHG3-201ENST00000413987 SLC48A1Q6P1K1 146 aa8.18□□□□□ -1.1
SNHG3-201ENST00000413987 CD164L2Q6UWJ8 174 aa8.18□□□□□ -1.1
SNHG3-201ENST00000413987 DRAM2Q6UX65 266 aa8.18□□□□□ -1.1
SNHG3-201ENST00000413987 DGAT2L6Q6ZPD8 337 aa8.18□□□□□ -1.1
SNHG3-201ENST00000413987 TMPRSS11FQ6ZWK6 438 aa8.18□□□□□ -1.1
SNHG3-201ENST00000413987 SSX6Q7RTT6 188 aa8.18□□□□□ -1.1
SNHG3-201ENST00000413987 CCDC54Q8NEL0 328 aa8.18□□□□□ -1.1
SNHG3-201ENST00000413987 OR51S1Q8NGJ8 323 aa8.18□□□□□ -1.1
SNHG3-201ENST00000413987 CA5BP1Q8WTZ4 195 aa8.18□□□□□ -1.1
SNHG3-201ENST00000413987 CNN2Q99439 309 aaKnown RBP8.18□□□□□ -1.1
SNHG3-201ENST00000413987 ACTRT3Q9BYD9 372 aa8.18□□□□□ -1.1
SNHG3-201ENST00000413987 TMEM9BQ9NQ34 198 aa8.18□□□□□ -1.1
SNHG3-201ENST00000413987 CUTCQ9NTM9 273 aa8.18□□□□□ -1.1
SNHG3-201ENST00000413987 GHRLQ9UBU3 117 aa8.18□□□□□ -1.1
SNHG3-201ENST00000413987 FBXL4Q9UKA2 621 aa8.18□□□□□ -1.1
SNHG3-201ENST00000413987 MOKQ9UQ07 419 aa8.18□□□□□ -1.1
SNHG3-201ENST00000413987 NPIPB6E9PJ23 425 aa8.18□□□□□ -1.1
SNHG3-201ENST00000413987 F8VVB4 439 aa8.18□□□□□ -1.1
SNHG3-201ENST00000413987 F8VWA3 439 aa8.18□□□□□ -1.1
SNHG3-201ENST00000413987 PIN1P1O15428 100 aa8.18□□□□□ -1.1
SNHG3-201ENST00000413987 TOX4O94842 621 aa8.18□□□□□ -1.1
SNHG3-201ENST00000413987 AGFG2O95081 481 aa8.18□□□□□ -1.1
SNHG3-201ENST00000413987 RCC1P18754 421 aaPredicted RBP8.18□□□□□ -1.1
SNHG3-201ENST00000413987 MPZP25189 248 aa8.18□□□□□ -1.1
SNHG3-201ENST00000413987 CD34P28906 385 aa8.18□□□□□ -1.1
SNHG3-201ENST00000413987 FGF8P55075 233 aaPredicted RBP8.18□□□□□ -1.1
SNHG3-201ENST00000413987 FXYD6P3P58550 94 aa8.18□□□□□ -1.1
SNHG3-201ENST00000413987 RAB2AP61019 212 aa8.18□□□□□ -1.1
SNHG3-201ENST00000413987 UBE2KP61086 200 aa8.18□□□□□ -1.1
SNHG3-201ENST00000413987 DEFA6Q01524 100 aa8.18□□□□□ -1.1
SNHG3-201ENST00000413987 FABP9Q0Z7S8 132 aa8.18□□□□□ -1.1
SNHG3-201ENST00000413987 GGTLC2Q14390 218 aa8.18□□□□□ -1.1
SNHG3-201ENST00000413987 HMGN3Q15651 99 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms