RNA–Protein interactions for RNA: ENST00000413553.1

SIK3-202, Transcript of SIK family kinase 3, humanhuman

TSL 5

Gene SIK3, Length 3,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-202ENST00000413553 CYB561D1Q8N8Q1 229 aa7.8□□□□□ -1.16
SIK3-202ENST00000413553 PIGTQ969N2 578 aa7.8□□□□□ -1.16
SIK3-202ENST00000413553 VN1R1Q9GZP7 353 aa7.8□□□□□ -1.16
SIK3-202ENST00000413553 WWTR1Q9GZV5 400 aa7.8□□□□□ -1.16
SIK3-202ENST00000413553 NAA60Q9H7X0 242 aa7.8□□□□□ -1.16
SIK3-202ENST00000413553 TMED3Q9Y3Q3 217 aa7.8□□□□□ -1.16
SIK3-202ENST00000413553 M0R296 226 aa7.79□□□□□ -1.16
SIK3-202ENST00000413553 DUX1O43812 170 aa7.79□□□□□ -1.16
SIK3-202ENST00000413553 GLB1P16278 677 aa7.79□□□□□ -1.16
SIK3-202ENST00000413553 ZNF17P17021 662 aa7.79□□□□□ -1.16
SIK3-202ENST00000413553 DUSP1P28562 367 aa7.79□□□□□ -1.16
SIK3-202ENST00000413553 TAS2R60P59551 318 aa7.79□□□□□ -1.16
SIK3-202ENST00000413553 DCAF7P61962 342 aa7.79□□□□□ -1.16
SIK3-202ENST00000413553 GABREP78334 506 aa7.79□□□□□ -1.16
SIK3-202ENST00000413553 CHAF1BQ13112 559 aa7.79□□□□□ -1.16
SIK3-202ENST00000413553 GNMTQ14749 295 aa7.79□□□□□ -1.16
SIK3-202ENST00000413553 AKR1C8PQ5T2L2 129 aa7.79□□□□□ -1.16
SIK3-202ENST00000413553 MEX3BQ6ZN04 569 aaKnown RBP7.79□□□□□ -1.16
SIK3-202ENST00000413553 DOK3Q7L591 496 aa7.79□□□□□ -1.16
SIK3-202ENST00000413553 CPEB2Q7Z5Q1 589 aaKnown RBP7.79□□□□□ -1.16
SIK3-202ENST00000413553 FAM89BQ8N5H3 189 aa7.79□□□□□ -1.16
SIK3-202ENST00000413553 SUMF1Q8NBK3 374 aa7.79□□□□□ -1.16
SIK3-202ENST00000413553 SLC38A9Q8NBW4 561 aa7.79□□□□□ -1.16
SIK3-202ENST00000413553 SNIP1Q8TAD8 396 aaKnown RBP7.79□□□□□ -1.16
SIK3-202ENST00000413553 CPNE4Q96A23 557 aaPredicted RBP7.79□□□□□ -1.16
SIK3-202ENST00000413553 PGAM5Q96HS1 289 aa7.79□□□□□ -1.16
SIK3-202ENST00000413553 SMOC1Q9H4F8 434 aa7.79□□□□□ -1.16
SIK3-202ENST00000413553 RALGAPA1Q6GYQ0 2036 aa7.79□□□□□ -1.16
SIK3-202ENST00000413553 ELOA3CA0A087WX78 387 aaPredicted RBP7.79□□□□□ -1.16
SIK3-202ENST00000413553 TRGC1P0CF51 173 aa7.79□□□□□ -1.16
SIK3-202ENST00000413553 ATP6V0CP27449 155 aa7.79□□□□□ -1.16
SIK3-202ENST00000413553 RRADP55042 308 aa7.79□□□□□ -1.16
SIK3-202ENST00000413553 EWSR1Q01844 656 aaKnown RBP eCLIP7.79□□□□□ -1.16
SIK3-202ENST00000413553 IL13RA2Q14627 380 aa7.79□□□□□ -1.16
SIK3-202ENST00000413553 TMEM187Q14656 261 aa7.79□□□□□ -1.16
SIK3-202ENST00000413553 NSDHLQ15738 373 aa7.79□□□□□ -1.16
SIK3-202ENST00000413553 HLA-BQ31612 363 aa7.79□□□□□ -1.16
SIK3-202ENST00000413553 HIST2H3PS2Q5TEC6 136 aa7.79□□□□□ -1.16
SIK3-202ENST00000413553 FIP1L1Q6UN15 594 aaKnown RBP7.79□□□□□ -1.16
SIK3-202ENST00000413553 C16orf47Q6ZP98 133 aaPredicted RBP7.79□□□□□ -1.16
SIK3-202ENST00000413553 PLXDC1Q8IUK5 500 aa7.79□□□□□ -1.16
SIK3-202ENST00000413553 TVP23CQ96ET8 276 aa7.79□□□□□ -1.16
SIK3-202ENST00000413553 CRLF2Q9HC73 371 aa7.79□□□□□ -1.16
SIK3-202ENST00000413553 ANXA10Q9UJ72 324 aa7.79□□□□□ -1.16
SIK3-202ENST00000413553 PILRBQ9UKJ0 227 aa7.79□□□□□ -1.16
SIK3-202ENST00000413553 PCDH15Q96QU1 1955 aa7.78□□□□□ -1.16
SIK3-202ENST00000413553 MED12Q93074 2177 aa7.78□□□□□ -1.16
SIK3-202ENST00000413553 IGHV5-51A0A0C4DH38 117 aa7.78□□□□□ -1.16
SIK3-202ENST00000413553 FAM24AA6NFZ4 105 aa7.78□□□□□ -1.16
SIK3-202ENST00000413553 ARGFXA6NJG6 315 aa7.78□□□□□ -1.16
SIK3-202ENST00000413553 ZNF724A8MTY0 619 aa7.78□□□□□ -1.16
SIK3-202ENST00000413553 HSD17B6O14756 317 aa7.78□□□□□ -1.16
SIK3-202ENST00000413553 PTBP3O95758 552 aaKnown RBP7.78□□□□□ -1.16
SIK3-202ENST00000413553 SRP19P09132 144 aaKnown RBP7.78□□□□□ -1.16
SIK3-202ENST00000413553 FAHP16930 419 aa7.78□□□□□ -1.16
SIK3-202ENST00000413553 LSM6P62312 80 aaKnown RBP7.78□□□□□ -1.16
SIK3-202ENST00000413553 ZP4Q12836 540 aa7.78□□□□□ -1.16
SIK3-202ENST00000413553 MFAP5Q13361 173 aa7.78□□□□□ -1.16
SIK3-202ENST00000413553 TMEM176BQ3YBM2 270 aaPredicted RBP7.78□□□□□ -1.16
SIK3-202ENST00000413553 OR10AD1Q8NGE0 317 aa7.78□□□□□ -1.16
SIK3-202ENST00000413553 OR14L1PQ8NHC6 308 aa7.78□□□□□ -1.16
SIK3-202ENST00000413553 PACRGQ96M98 296 aaPredicted RBP7.78□□□□□ -1.16
SIK3-202ENST00000413553 DUSP23Q9BVJ7 150 aa7.78□□□□□ -1.16
SIK3-202ENST00000413553 LIME1Q9H400 295 aa7.78□□□□□ -1.16
SIK3-202ENST00000413553 SMDT1Q9H4I9 107 aa7.78□□□□□ -1.16
SIK3-202ENST00000413553 SERINC1Q9NRX5 453 aa7.78□□□□□ -1.16
SIK3-202ENST00000413553 SLC7A11Q9UPY5 501 aa7.78□□□□□ -1.16
SIK3-202ENST00000413553 WSB1Q9Y6I7 421 aa7.78□□□□□ -1.16
SIK3-202ENST00000413553 A0A1B0GW64 132 aa7.78□□□□□ -1.16
SIK3-202ENST00000413553 FAM230AA0A1W2PPH8 454 aa7.78□□□□□ -1.16
SIK3-202ENST00000413553 SMCO3A2RU48 225 aa7.78□□□□□ -1.16
SIK3-202ENST00000413553 SLC33A1O00400 549 aaPredicted RBP7.78□□□□□ -1.16
SIK3-202ENST00000413553 PHF1O43189 567 aaPredicted RBP7.78□□□□□ -1.16
SIK3-202ENST00000413553 SFTPDP35247 375 aa7.78□□□□□ -1.16
SIK3-202ENST00000413553 ZNF266Q14584 549 aa7.78□□□□□ -1.16
SIK3-202ENST00000413553 ARL6IP1Q15041 203 aa7.78□□□□□ -1.16
SIK3-202ENST00000413553 TRIM61Q5EBN2 209 aa7.78□□□□□ -1.16
SIK3-202ENST00000413553 TMEM105Q8N8V8 129 aa7.78□□□□□ -1.16
SIK3-202ENST00000413553 THAP3Q8WTV1 239 aaPredicted RBP7.78□□□□□ -1.16
SIK3-202ENST00000413553 FRZBQ92765 325 aa7.78□□□□□ -1.16
SIK3-202ENST00000413553 DDIT4LQ96D03 193 aa7.78□□□□□ -1.16
SIK3-202ENST00000413553 LURAP1Q96LR2 239 aa7.78□□□□□ -1.16
SIK3-202ENST00000413553 UCK1Q9HA47 277 aa7.78□□□□□ -1.16
SIK3-202ENST00000413553 MMACHCQ9Y4U1 282 aa7.78□□□□□ -1.16
SIK3-202ENST00000413553 NCOA6Q14686 2063 aaPredicted RBP7.78□□□□□ -1.16
SIK3-202ENST00000413553 A0A087WWC5 75 aa7.77□□□□□ -1.16
SIK3-202ENST00000413553 C5orf63A6NC05 138 aa7.77□□□□□ -1.16
SIK3-202ENST00000413553 PATE3B3GLJ2 98 aa7.77□□□□□ -1.16
SIK3-202ENST00000413553 ONECUT2O95948 504 aa7.77□□□□□ -1.16
SIK3-202ENST00000413553 LMO1P25800 156 aa7.77□□□□□ -1.16
SIK3-202ENST00000413553 FOXF1Q12946 379 aa7.77□□□□□ -1.16
SIK3-202ENST00000413553 LIAT1Q6ZQX7 453 aa7.77□□□□□ -1.16
SIK3-202ENST00000413553 UEVLDQ8IX04 471 aa7.77□□□□□ -1.16
SIK3-202ENST00000413553 NAXEQ8NCW5 288 aa7.77□□□□□ -1.16
SIK3-202ENST00000413553 OR11L1Q8NGX0 322 aa7.77□□□□□ -1.16
SIK3-202ENST00000413553 SNX22Q96L94 193 aa7.77□□□□□ -1.16
SIK3-202ENST00000413553 FAAP24Q9BTP7 215 aa7.77□□□□□ -1.16
SIK3-202ENST00000413553 SLC2A9Q9NRM0 540 aa7.77□□□□□ -1.16
SIK3-202ENST00000413553 SDHAF3Q9NRP4 125 aa7.77□□□□□ -1.16
SIK3-202ENST00000413553 NECAP2Q9NVZ3 263 aa7.77□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms