RNA–Protein interactions for RNA: ENST00000413354.5

MCF2L-211, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-211ENST00000413354 CNIH3Q8TBE1 160 aa12.84□□□□□ -0.35
MCF2L-211ENST00000413354 PDCD1LG2Q9BQ51 273 aa12.84□□□□□ -0.35
MCF2L-211ENST00000413354 VCXQ9H320 206 aa12.84□□□□□ -0.35
MCF2L-211ENST00000413354 RBFOX1Q9NWB1 397 aaKnown RBP12.84□□□□□ -0.35
MCF2L-211ENST00000413354 MMP24Q9Y5R2 645 aa12.84□□□□□ -0.35
MCF2L-211ENST00000413354 HSPE1-MOB4S4R3N1 261 aa12.84□□□□□ -0.35
MCF2L-211ENST00000413354 A0A1W2PRD5 423 aa12.83□□□□□ -0.36
MCF2L-211ENST00000413354 A0A1W2PRF3 423 aa12.83□□□□□ -0.36
MCF2L-211ENST00000413354 A0A1W2PRM7 423 aa12.83□□□□□ -0.36
MCF2L-211ENST00000413354 F8VVB4 439 aa12.83□□□□□ -0.36
MCF2L-211ENST00000413354 F8VWA3 439 aa12.83□□□□□ -0.36
MCF2L-211ENST00000413354 SULT1B1O43704 296 aa12.83□□□□□ -0.36
MCF2L-211ENST00000413354 NDUFA7O95182 113 aa12.83□□□□□ -0.36
MCF2L-211ENST00000413354 IGHV4-59P01825 116 aa12.83□□□□□ -0.36
MCF2L-211ENST00000413354 RBP4P02753 201 aa12.83□□□□□ -0.36
MCF2L-211ENST00000413354 CD2P06729 351 aa12.83□□□□□ -0.36
MCF2L-211ENST00000413354 HCKP08631 526 aa12.83□□□□□ -0.36
MCF2L-211ENST00000413354 PRKACAP17612 351 aa12.83□□□□□ -0.36
MCF2L-211ENST00000413354 BCL3P20749 454 aa12.83□□□□□ -0.36
MCF2L-211ENST00000413354 RAG2P55895 527 aa12.83□□□□□ -0.36
MCF2L-211ENST00000413354 DLX1P56177 255 aa12.83□□□□□ -0.36
MCF2L-211ENST00000413354 EDDM3BP56851 147 aa12.83□□□□□ -0.36
MCF2L-211ENST00000413354 PRB3Q04118 309 aaPredicted RBP12.83□□□□□ -0.36
MCF2L-211ENST00000413354 ZNF146Q15072 292 aa12.83□□□□□ -0.36
MCF2L-211ENST00000413354 RPL22L1Q6P5R6 122 aaKnown RBP12.83□□□□□ -0.36
MCF2L-211ENST00000413354 SAXO1Q8IYX7 474 aa12.83□□□□□ -0.36
MCF2L-211ENST00000413354 OR5R1Q8NH85 324 aa12.83□□□□□ -0.36
MCF2L-211ENST00000413354 RFT1Q96AA3 541 aa12.83□□□□□ -0.36
MCF2L-211ENST00000413354 BEX1Q9HBH7 125 aa12.83□□□□□ -0.36
MCF2L-211ENST00000413354 CHCHD3Q9NX63 227 aaKnown RBP12.83□□□□□ -0.36
MCF2L-211ENST00000413354 DIMT1Q9UNQ2 313 aaKnown RBP12.83□□□□□ -0.36
MCF2L-211ENST00000413354 E9PI62 339 aa12.82□□□□□ -0.36
MCF2L-211ENST00000413354 CASQ2O14958 399 aaPredicted RBP12.82□□□□□ -0.36
MCF2L-211ENST00000413354 SPRY1O43609 319 aaPredicted RBP12.82□□□□□ -0.36
MCF2L-211ENST00000413354 GPR137BO60478 399 aa12.82□□□□□ -0.36
MCF2L-211ENST00000413354 KDM4BO94953 1096 aa12.82□□□□□ -0.36
MCF2L-211ENST00000413354 CLIC3O95833 236 aa12.82□□□□□ -0.36
MCF2L-211ENST00000413354 PIPP12273 146 aaPredicted RBP12.82□□□□□ -0.36
MCF2L-211ENST00000413354 GABRR1P24046 479 aa12.82□□□□□ -0.36
MCF2L-211ENST00000413354 CAPGP40121 348 aa12.82□□□□□ -0.36
MCF2L-211ENST00000413354 NPBWR2P48146 333 aa12.82□□□□□ -0.36
MCF2L-211ENST00000413354 ADARB1P78563 741 aaKnown RBP12.82□□□□□ -0.36
MCF2L-211ENST00000413354 MEF2CQ06413 473 aaPredicted RBP12.82□□□□□ -0.36
MCF2L-211ENST00000413354 ZNF273Q14593 569 aa12.82□□□□□ -0.36
MCF2L-211ENST00000413354 CDK5R1Q15078 307 aa12.82□□□□□ -0.36
MCF2L-211ENST00000413354 OGFRL1Q5TC84 451 aaPredicted RBP12.82□□□□□ -0.36
MCF2L-211ENST00000413354 GPR148Q8TDV2 347 aa12.82□□□□□ -0.36
MCF2L-211ENST00000413354 HMG20AQ9NP66 347 aa12.82□□□□□ -0.36
MCF2L-211ENST00000413354 EXOSC4Q9NPD3 245 aaKnown RBP12.82□□□□□ -0.36
MCF2L-211ENST00000413354 VPREB3Q9UKI3 123 aa12.82□□□□□ -0.36
MCF2L-211ENST00000413354 hADV38S2A0JD32 116 aa12.81□□□□□ -0.36
MCF2L-211ENST00000413354 SH2D1BO14796 132 aa12.81□□□□□ -0.36
MCF2L-211ENST00000413354 MAGEB3O15480 346 aa12.81□□□□□ -0.36
MCF2L-211ENST00000413354 ZNF728P0DKX0 622 aa12.81□□□□□ -0.36
MCF2L-211ENST00000413354 CCL3L1P16619 93 aa12.81□□□□□ -0.36
MCF2L-211ENST00000413354 RAB3AP20336 220 aa12.81□□□□□ -0.36
MCF2L-211ENST00000413354 MDKP21741 143 aaPredicted RBP12.81□□□□□ -0.36
MCF2L-211ENST00000413354 ETV1P50549 477 aa12.81□□□□□ -0.36
MCF2L-211ENST00000413354 BMXP51813 675 aa12.81□□□□□ -0.36
MCF2L-211ENST00000413354 EDDM3AQ14507 147 aa12.81□□□□□ -0.36
MCF2L-211ENST00000413354 GRK1Q15835 563 aa12.81□□□□□ -0.36
MCF2L-211ENST00000413354 HCP5Q6MZN7 132 aa12.81□□□□□ -0.36
MCF2L-211ENST00000413354 C17orf107Q6ZR85 190 aa12.81□□□□□ -0.36
MCF2L-211ENST00000413354 C8orf59Q8N0T1 100 aaPredicted RBP12.81□□□□□ -0.36
MCF2L-211ENST00000413354 PNKDQ8N490 385 aa12.81□□□□□ -0.36
MCF2L-211ENST00000413354 BEND2Q8NDZ0 799 aa12.81□□□□□ -0.36
MCF2L-211ENST00000413354 OR5D18Q8NGL1 313 aa12.81□□□□□ -0.36
MCF2L-211ENST00000413354 RPS4Y2Q8TD47 263 aa12.81□□□□□ -0.36
MCF2L-211ENST00000413354 TMEM80Q96HE8 168 aa12.81□□□□□ -0.36
MCF2L-211ENST00000413354 SPACA5Q96QH8 159 aa12.81□□□□□ -0.36
MCF2L-211ENST00000413354 SLITRK2Q9H156 845 aa12.81□□□□□ -0.36
MCF2L-211ENST00000413354 C1RLQ9NZP8 487 aa12.81□□□□□ -0.36
MCF2L-211ENST00000413354 IL36RNQ9UBH0 155 aa12.81□□□□□ -0.36
MCF2L-211ENST00000413354 KIAA2026Q5HYC2 2103 aa12.8□□□□□ -0.36
MCF2L-211ENST00000413354 TMEM82A0PJX8 343 aa12.8□□□□□ -0.36
MCF2L-211ENST00000413354 FUOMA2VDF0 154 aa12.8□□□□□ -0.36
MCF2L-211ENST00000413354 EFCAB10A6NFE3 127 aa12.8□□□□□ -0.36
MCF2L-211ENST00000413354 C17orf98A8MV24 154 aa12.8□□□□□ -0.36
MCF2L-211ENST00000413354 MGST3O14880 152 aa12.8□□□□□ -0.36
MCF2L-211ENST00000413354 OMGP23515 440 aa12.8□□□□□ -0.36
MCF2L-211ENST00000413354 GTF2A1P52655 376 aaPredicted RBP12.8□□□□□ -0.36
MCF2L-211ENST00000413354 DLX6P56179 175 aa12.8□□□□□ -0.36
MCF2L-211ENST00000413354 LGALS4P56470 323 aa12.8□□□□□ -0.36
MCF2L-211ENST00000413354 KISS1Q15726 138 aa12.8□□□□□ -0.36
MCF2L-211ENST00000413354 DHRS7BQ6IAN0 325 aaPredicted RBP12.8□□□□□ -0.36
MCF2L-211ENST00000413354 OR13D1Q8NGV5 346 aa12.8□□□□□ -0.36
MCF2L-211ENST00000413354 OR52N1Q8NH53 320 aa12.8□□□□□ -0.36
MCF2L-211ENST00000413354 SMIM19Q96E16 107 aa12.8□□□□□ -0.36
MCF2L-211ENST00000413354 ZNF714Q96N38 554 aa12.8□□□□□ -0.36
MCF2L-211ENST00000413354 GSTK1Q9Y2Q3 226 aa12.8□□□□□ -0.36
MCF2L-211ENST00000413354 LINC00312Q9Y6C7 94 aa12.8□□□□□ -0.36
MCF2L-211ENST00000413354 IGKV1-12A0A0C4DH73 117 aa12.79□□□□□ -0.36
MCF2L-211ENST00000413354 IGKV1D-12P01611 117 aa12.79□□□□□ -0.36
MCF2L-211ENST00000413354 TMEM225BP0DP42 221 aa12.79□□□□□ -0.36
MCF2L-211ENST00000413354 COX7A1P24310 79 aa12.79□□□□□ -0.36
MCF2L-211ENST00000413354 DUSP1P28562 367 aa12.79□□□□□ -0.36
MCF2L-211ENST00000413354 ERP29P30040 261 aaKnown RBP12.79□□□□□ -0.36
MCF2L-211ENST00000413354 SNU13P55769 128 aaKnown RBP12.79□□□□□ -0.36
MCF2L-211ENST00000413354 ZP1P60852 638 aa12.79□□□□□ -0.36
MCF2L-211ENST00000413354 TAF9Q16594 264 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms