RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 SH2D7A6NKC9 451 aaPredicted RBP11.36□□□□□ -0.59
HLA-DQB2-229ENST00000411527 E9PQ18 207 aa11.36□□□□□ -0.59
HLA-DQB2-229ENST00000411527 HAND1O96004 215 aa11.36□□□□□ -0.59
HLA-DQB2-229ENST00000411527 CRISP1P54107 249 aa11.36□□□□□ -0.59
HLA-DQB2-229ENST00000411527 UBE2V2Q15819 145 aa11.36□□□□□ -0.59
HLA-DQB2-229ENST00000411527 C9orf152Q5JTZ5 239 aa11.36□□□□□ -0.59
HLA-DQB2-229ENST00000411527 Q6ZSR3 168 aa11.36□□□□□ -0.59
HLA-DQB2-229ENST00000411527 SLC25A26Q70HW3 274 aa11.36□□□□□ -0.59
HLA-DQB2-229ENST00000411527 BCDIN3DQ7Z5W3 292 aaKnown RBP11.36□□□□□ -0.59
HLA-DQB2-229ENST00000411527 TRAPPC6BQ86SZ2 158 aa11.36□□□□□ -0.59
HLA-DQB2-229ENST00000411527 SLC35F2Q8IXU6 374 aa11.36□□□□□ -0.59
HLA-DQB2-229ENST00000411527 ABHD12Q8N2K0 398 aa11.36□□□□□ -0.59
HLA-DQB2-229ENST00000411527 BCAS4Q8TDM0 211 aa11.36□□□□□ -0.59
HLA-DQB2-229ENST00000411527 EMG1Q92979 244 aaKnown RBP11.36□□□□□ -0.59
HLA-DQB2-229ENST00000411527 CCDC124Q96CT7 223 aaKnown RBP11.36□□□□□ -0.59
HLA-DQB2-229ENST00000411527 ASB9Q96DX5 294 aa11.36□□□□□ -0.59
HLA-DQB2-229ENST00000411527 NSL1Q96IY1 281 aa11.36□□□□□ -0.59
HLA-DQB2-229ENST00000411527 PLEKHA1Q9HB21 404 aa11.36□□□□□ -0.59
HLA-DQB2-229ENST00000411527 KIAA2026Q5HYC2 2103 aa11.35□□□□□ -0.59
HLA-DQB2-229ENST00000411527 ZNF670-ZNF695F2Z2N8 137 aa11.35□□□□□ -0.59
HLA-DQB2-229ENST00000411527 PRKYO43930 277 aa11.35□□□□□ -0.59
HLA-DQB2-229ENST00000411527 PSPNO60542 156 aa11.35□□□□□ -0.59
HLA-DQB2-229ENST00000411527 RPP14O95059 124 aaKnown RBP11.35□□□□□ -0.59
HLA-DQB2-229ENST00000411527 CCL1P22362 96 aa11.35□□□□□ -0.59
HLA-DQB2-229ENST00000411527 DUSP1P28562 367 aa11.35□□□□□ -0.59
HLA-DQB2-229ENST00000411527 FUT6P51993 359 aa11.35□□□□□ -0.59
HLA-DQB2-229ENST00000411527 ARHGDIBP52566 201 aa11.35□□□□□ -0.59
HLA-DQB2-229ENST00000411527 BAIAP2L2Q6UXY1 529 aa11.35□□□□□ -0.59
HLA-DQB2-229ENST00000411527 MEPCEQ7L2J0 689 aaKnown RBP11.35□□□□□ -0.59
HLA-DQB2-229ENST00000411527 LINC00482Q8N8I6 264 aa11.35□□□□□ -0.59
HLA-DQB2-229ENST00000411527 DPF1Q92782 380 aa11.35□□□□□ -0.59
HLA-DQB2-229ENST00000411527 RBM14Q96PK6 669 aaKnown RBP11.35□□□□□ -0.59
HLA-DQB2-229ENST00000411527 B9D2Q9BPU9 175 aa11.35□□□□□ -0.59
HLA-DQB2-229ENST00000411527 SEBOXQ9HB31 216 aaPredicted RBP11.35□□□□□ -0.59
HLA-DQB2-229ENST00000411527 H2AFY2Q9P0M6 372 aaPredicted RBP11.35□□□□□ -0.59
HLA-DQB2-229ENST00000411527 IL36RNQ9UBH0 155 aa11.35□□□□□ -0.59
HLA-DQB2-229ENST00000411527 MRM2Q9UI43 246 aaKnown RBP11.35□□□□□ -0.59
HLA-DQB2-229ENST00000411527 LEUTXA8MZ59 168 aa11.34□□□□□ -0.59
HLA-DQB2-229ENST00000411527 MGST3O14880 152 aa11.34□□□□□ -0.59
HLA-DQB2-229ENST00000411527 SYT7O43581 403 aa11.34□□□□□ -0.59
HLA-DQB2-229ENST00000411527 OR2F2O95006 317 aa11.34□□□□□ -0.59
HLA-DQB2-229ENST00000411527 AMY1AP04745 511 aa11.34□□□□□ -0.59
HLA-DQB2-229ENST00000411527 AMY2AP04746 511 aa11.34□□□□□ -0.59
HLA-DQB2-229ENST00000411527 BDH1Q02338 343 aa11.34□□□□□ -0.59
HLA-DQB2-229ENST00000411527 ZNF91Q05481 1191 aa11.34□□□□□ -0.59
HLA-DQB2-229ENST00000411527 PTGES3Q15185 160 aaKnown RBP11.34□□□□□ -0.59
HLA-DQB2-229ENST00000411527 PRAMEF5Q5TYX0 476 aa11.34□□□□□ -0.59
HLA-DQB2-229ENST00000411527 OR52W1Q6IF63 320 aa11.34□□□□□ -0.59
HLA-DQB2-229ENST00000411527 RTN4RL2Q86UN3 420 aa11.34□□□□□ -0.59
HLA-DQB2-229ENST00000411527 MRPL41Q8IXM3 137 aaKnown RBP11.34□□□□□ -0.59
HLA-DQB2-229ENST00000411527 ENTHD1Q8IYW4 607 aa11.34□□□□□ -0.59
HLA-DQB2-229ENST00000411527 FAM58AQ8N1B3 248 aa11.34□□□□□ -0.59
HLA-DQB2-229ENST00000411527 YIPF7Q8N8F6 280 aa11.34□□□□□ -0.59
HLA-DQB2-229ENST00000411527 ZNF596Q8TC21 504 aa11.34□□□□□ -0.59
HLA-DQB2-229ENST00000411527 BORCS8Q96FH0 119 aa11.34□□□□□ -0.59
HLA-DQB2-229ENST00000411527 MNTQ99583 582 aa11.34□□□□□ -0.59
HLA-DQB2-229ENST00000411527 ZNF649Q9BS31 505 aa11.34□□□□□ -0.59
HLA-DQB2-229ENST00000411527 GPR61Q9BZJ8 451 aa11.34□□□□□ -0.59
HLA-DQB2-229ENST00000411527 ADGRL4Q9HBW9 690 aa11.34□□□□□ -0.59
HLA-DQB2-229ENST00000411527 PAPOLBQ9NRJ5 636 aaKnown RBP11.34□□□□□ -0.59
HLA-DQB2-229ENST00000411527 CLN6Q9NWW5 311 aa11.34□□□□□ -0.59
HLA-DQB2-229ENST00000411527 UBE2J1Q9Y385 318 aaPredicted RBP11.34□□□□□ -0.59
HLA-DQB2-229ENST00000411527 FAM172BPA6NC97 362 aa11.33□□□□□ -0.6
HLA-DQB2-229ENST00000411527 M0R129 80 aa11.33□□□□□ -0.6
HLA-DQB2-229ENST00000411527 GATBO75879 557 aaKnown RBP11.33□□□□□ -0.6
HLA-DQB2-229ENST00000411527 SERPINA3P01011 423 aa11.33□□□□□ -0.6
HLA-DQB2-229ENST00000411527 CCDC159P0C7I6 412 aa11.33□□□□□ -0.6
HLA-DQB2-229ENST00000411527 CALCBP10092 127 aa11.33□□□□□ -0.6
HLA-DQB2-229ENST00000411527 CDK2P24941 298 aa11.33□□□□□ -0.6
HLA-DQB2-229ENST00000411527 ERP29P30040 261 aaKnown RBP11.33□□□□□ -0.6
HLA-DQB2-229ENST00000411527 NPBWR2P48146 333 aa11.33□□□□□ -0.6
HLA-DQB2-229ENST00000411527 SNU13P55769 128 aaKnown RBP11.33□□□□□ -0.6
HLA-DQB2-229ENST00000411527 P2RX3P56373 397 aa11.33□□□□□ -0.6
HLA-DQB2-229ENST00000411527 CATSPERDQ86XM0 798 aa11.33□□□□□ -0.6
HLA-DQB2-229ENST00000411527 Q8IYB0 196 aa11.33□□□□□ -0.6
HLA-DQB2-229ENST00000411527 OSR2Q8N2R0 312 aa11.33□□□□□ -0.6
HLA-DQB2-229ENST00000411527 ADI1Q9BV57 179 aa11.33□□□□□ -0.6
HLA-DQB2-229ENST00000411527 GAL3ST2Q9H3Q3 398 aa11.33□□□□□ -0.6
HLA-DQB2-229ENST00000411527 RBFOX1Q9NWB1 397 aaKnown RBP11.33□□□□□ -0.6
HLA-DQB2-229ENST00000411527 GLS2Q9UI32 602 aa11.33□□□□□ -0.6
HLA-DQB2-229ENST00000411527 HHLA2Q9UM44 414 aa11.33□□□□□ -0.6
HLA-DQB2-229ENST00000411527 TRGV10A0A0A0MS01 117 aa11.32□□□□□ -0.6
HLA-DQB2-229ENST00000411527 PSMB11A5LHX3 300 aa11.32□□□□□ -0.6
HLA-DQB2-229ENST00000411527 AQP12BA6NM10 295 aa11.32□□□□□ -0.6
HLA-DQB2-229ENST00000411527 SIRPB1O00241 398 aa11.32□□□□□ -0.6
HLA-DQB2-229ENST00000411527 TOR1AO14656 332 aa11.32□□□□□ -0.6
HLA-DQB2-229ENST00000411527 IGLV1-47P01700 117 aa11.32□□□□□ -0.6
HLA-DQB2-229ENST00000411527 KRT8P05787 483 aa11.32□□□□□ -0.6
HLA-DQB2-229ENST00000411527 PRKACAP17612 351 aa11.32□□□□□ -0.6
HLA-DQB2-229ENST00000411527 BCL3P20749 454 aa11.32□□□□□ -0.6
HLA-DQB2-229ENST00000411527 CEACAM3P40198 252 aa11.32□□□□□ -0.6
HLA-DQB2-229ENST00000411527 OR3A1P47881 315 aa11.32□□□□□ -0.6
HLA-DQB2-229ENST00000411527 ATP1B3P54709 279 aa11.32□□□□□ -0.6
HLA-DQB2-229ENST00000411527 GNGT1P63211 74 aa11.32□□□□□ -0.6
HLA-DQB2-229ENST00000411527 HEPN1Q6WQI6 88 aa11.32□□□□□ -0.6
HLA-DQB2-229ENST00000411527 ETV3LQ6ZN32 361 aa11.32□□□□□ -0.6
HLA-DQB2-229ENST00000411527 SSX6Q7RTT6 188 aa11.32□□□□□ -0.6
HLA-DQB2-229ENST00000411527 AQP12AQ8IXF9 295 aa11.32□□□□□ -0.6
HLA-DQB2-229ENST00000411527 TCEANCQ8N8B7 351 aa11.32□□□□□ -0.6
HLA-DQB2-229ENST00000411527 OR51D1Q8NGF3 324 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms