RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 SLC35B1P78383 322 aa10.02□□□□□ -0.81
PRPF40A-202ENST00000410080 COL19A1Q14993 1142 aa10.02□□□□□ -0.81
PRPF40A-202ENST00000410080 TWIST1Q15672 202 aa10.02□□□□□ -0.81
PRPF40A-202ENST00000410080 TMED6Q8WW62 240 aa10.02□□□□□ -0.81
PRPF40A-202ENST00000410080 MCHR2Q969V1 340 aa10.02□□□□□ -0.81
PRPF40A-202ENST00000410080 ERRFI1Q9UJM3 462 aaPredicted RBP10.02□□□□□ -0.81
PRPF40A-202ENST00000410080 DIMT1Q9UNQ2 313 aaKnown RBP10.02□□□□□ -0.81
PRPF40A-202ENST00000410080 CSN3P07498 182 aa10.02□□□□□ -0.81
PRPF40A-202ENST00000410080 CLEC2LP0C7M8 214 aa10.02□□□□□ -0.81
PRPF40A-202ENST00000410080 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.02□□□□□ -0.812e-8■■■■■ 54
PRPF40A-202ENST00000410080 OR1N2Q8NGR9 330 aa10.02□□□□□ -0.81
PRPF40A-202ENST00000410080 SLC25A46Q96AG3 418 aa10.02□□□□□ -0.81
PRPF40A-202ENST00000410080 LINC01387J3KSC0 135 aa10.02□□□□□ -0.81
PRPF40A-202ENST00000410080 CALCRP30988 508 aa10.02□□□□□ -0.81
PRPF40A-202ENST00000410080 DPTQ07507 201 aa10.02□□□□□ -0.81
PRPF40A-202ENST00000410080 AMMECR1LQ6DCA0 310 aa10.02□□□□□ -0.81
PRPF40A-202ENST00000410080 ETV3LQ6ZN32 361 aa10.02□□□□□ -0.81
PRPF40A-202ENST00000410080 TMEM262E9PQX1 116 aa10.02□□□□□ -0.81
PRPF40A-202ENST00000410080 MAGEA5P43359 124 aa10.02□□□□□ -0.81
PRPF40A-202ENST00000410080 KIR3DL2P43630 455 aa10.02□□□□□ -0.81
PRPF40A-202ENST00000410080 HERVK_113P61574 105 aa10.02□□□□□ -0.81
PRPF40A-202ENST00000410080 HTRA4P83105 476 aaPredicted RBP10.02□□□□□ -0.81
PRPF40A-202ENST00000410080 FCN2Q15485 313 aa10.02□□□□□ -0.81
PRPF40A-202ENST00000410080 RPEL1Q2QD12 228 aa10.02□□□□□ -0.81
PRPF40A-202ENST00000410080 TM4SF20Q53R12 229 aa10.02□□□□□ -0.81
PRPF40A-202ENST00000410080 ZNF547Q8IVP9 402 aa10.02□□□□□ -0.81
PRPF40A-202ENST00000410080 OR5H6Q8NGV6 325 aa10.02□□□□□ -0.81
PRPF40A-202ENST00000410080 OR6C3Q9NZP0 311 aa10.02□□□□□ -0.81
PRPF40A-202ENST00000410080 LRP12Q9Y561 859 aa10.02□□□□□ -0.81
PRPF40A-202ENST00000410080 TAAR5O14804 337 aa10.02□□□□□ -0.81
PRPF40A-202ENST00000410080 TGFBR1P36897 503 aa10.02□□□□□ -0.81
PRPF40A-202ENST00000410080 ANKRD37Q7Z713 158 aa10.02□□□□□ -0.81
PRPF40A-202ENST00000410080 MOGAT3Q86VF5 341 aa10.02□□□□□ -0.81
PRPF40A-202ENST00000410080 TEX29Q8N6K0 151 aa10.02□□□□□ -0.81
PRPF40A-202ENST00000410080 ZFAND2BQ8WV99 257 aa10.02□□□□□ -0.81
PRPF40A-202ENST00000410080 METTL12A8MUP2 240 aa10.01□□□□□ -0.81
PRPF40A-202ENST00000410080 SLC17A1Q14916 467 aa10.01□□□□□ -0.81
PRPF40A-202ENST00000410080 C16orf47Q6ZP98 133 aaPredicted RBP10.01□□□□□ -0.81
PRPF40A-202ENST00000410080 PIMREGQ9BSJ6 248 aa10.01□□□□□ -0.81
PRPF40A-202ENST00000410080 NAT8BQ9UHF3 227 aa10.01□□□□□ -0.81
PRPF40A-202ENST00000410080 BRCA1P38398 1863 aaKnown RBP10.01□□□□□ -0.81
PRPF40A-202ENST00000410080 GABRA1P14867 456 aa10.01□□□□□ -0.81
PRPF40A-202ENST00000410080 BCL3P20749 454 aa10.01□□□□□ -0.81
PRPF40A-202ENST00000410080 SMAGPQ0VAQ4 97 aa10.01□□□□□ -0.81
PRPF40A-202ENST00000410080 C11orf91Q3C1V1 193 aa10.01□□□□□ -0.81
PRPF40A-202ENST00000410080 TMEM102Q8N9M5 508 aaPredicted RBP10.01□□□□□ -0.81
PRPF40A-202ENST00000410080 FAAP24Q9BTP7 215 aa10.01□□□□□ -0.81
PRPF40A-202ENST00000410080 VN1R1Q9GZP7 353 aa10.01□□□□□ -0.81
PRPF40A-202ENST00000410080 TRDV1A0A1B0GX56 115 aa10.01□□□□□ -0.81
PRPF40A-202ENST00000410080 HLA-GP17693 338 aa10.01□□□□□ -0.81
PRPF40A-202ENST00000410080 PSMB6P28072 239 aa10.01□□□□□ -0.81
PRPF40A-202ENST00000410080 ARRB2P32121 409 aa10.01□□□□□ -0.81
PRPF40A-202ENST00000410080 TEX261Q6UWH6 196 aa10.01□□□□□ -0.81
PRPF40A-202ENST00000410080 D2HGDHQ8N465 521 aa10.01□□□□□ -0.81
PRPF40A-202ENST00000410080 OR52B4Q8NGK2 314 aa10.01□□□□□ -0.81
PRPF40A-202ENST00000410080 RTN4RQ9BZR6 473 aa10.01□□□□□ -0.81
PRPF40A-202ENST00000410080 PLEKHB1Q9UF11 243 aaPredicted RBP10.01□□□□□ -0.81
PRPF40A-202ENST00000410080 GIPP09681 153 aaPredicted RBP10.01□□□□□ -0.81
PRPF40A-202ENST00000410080 ACAA2P42765 397 aaKnown RBP10.01□□□□□ -0.81
PRPF40A-202ENST00000410080 FGF8P55075 233 aaPredicted RBP10.01□□□□□ -0.81
PRPF40A-202ENST00000410080 DLX1P56177 255 aa10.01□□□□□ -0.81
PRPF40A-202ENST00000410080 PRDM7Q9NQW5 492 aa10.01□□□□□ -0.81
PRPF40A-202ENST00000410080 RBFOX1Q9NWB1 397 aaKnown RBP10.01□□□□□ -0.81
PRPF40A-202ENST00000410080 C1RLQ9NZP8 487 aa10.01□□□□□ -0.81
PRPF40A-202ENST00000410080 POMT2Q9UKY4 750 aa10.01□□□□□ -0.81
PRPF40A-202ENST00000410080 PRSS12P56730 875 aa10.01□□□□□ -0.81
PRPF40A-202ENST00000410080 HIST1H3AP68431 136 aa10.01□□□□□ -0.81
PRPF40A-202ENST00000410080 OR8I2Q8N0Y5 310 aa10.01□□□□□ -0.81
PRPF40A-202ENST00000410080 SLC35B4Q969S0 331 aa10.01□□□□□ -0.81
PRPF40A-202ENST00000410080 C16orf92Q96LL3 132 aa10.01□□□□□ -0.81
PRPF40A-202ENST00000410080 NEURL2Q9BR09 285 aa10.01□□□□□ -0.81
PRPF40A-202ENST00000410080 ZNF407Q9C0G0 2248 aa10.01□□□□□ -0.81
PRPF40A-202ENST00000410080 A0A087WUJ7 227 aa10.01□□□□□ -0.81
PRPF40A-202ENST00000410080 METAP1P53582 386 aa10.01□□□□□ -0.81
PRPF40A-202ENST00000410080 TRA2AQ13595 282 aaKnown RBP eCLIP10.01□□□□□ -0.816e-7■■■■□ 22.3
PRPF40A-202ENST00000410080 PLAUP00749 431 aa10□□□□□ -0.81
PRPF40A-202ENST00000410080 PJVKQ0ZLH3 352 aa10□□□□□ -0.81
PRPF40A-202ENST00000410080 LINC00469Q8N7U9 141 aa10□□□□□ -0.81
PRPF40A-202ENST00000410080 ZNF485Q8NCK3 441 aa10□□□□□ -0.81
PRPF40A-202ENST00000410080 AMDHD2Q9Y303 409 aa10□□□□□ -0.81
PRPF40A-202ENST00000410080 LANCL1O43813 399 aa10□□□□□ -0.81
PRPF40A-202ENST00000410080 FAM87AP0C7U9 286 aa10□□□□□ -0.81
PRPF40A-202ENST00000410080 SRSF9Q13242 221 aaKnown RBP eCLIP10□□□□□ -0.81
PRPF40A-202ENST00000410080 ADIPOQQ15848 244 aa10□□□□□ -0.81
PRPF40A-202ENST00000410080 FHL5Q5TD97 284 aa10□□□□□ -0.81
PRPF40A-202ENST00000410080 SGK494Q96LW2 274 aa10□□□□□ -0.81
PRPF40A-202ENST00000410080 RNF167Q9H6Y7 350 aa10□□□□□ -0.81
PRPF40A-202ENST00000410080 WDR81Q562E7 1941 aa10□□□□□ -0.81
PRPF40A-202ENST00000410080 C7orf72A4D263 438 aa10□□□□□ -0.81
PRPF40A-202ENST00000410080 HIST1H1EP10412 219 aaKnown RBP10□□□□□ -0.81
PRPF40A-202ENST00000410080 SPCS3P61009 180 aa10□□□□□ -0.81
PRPF40A-202ENST00000410080 EBLN2Q6P2I7 272 aa10□□□□□ -0.81
PRPF40A-202ENST00000410080 RBPMSQ93062 196 aaKnown RBP10□□□□□ -0.81
PRPF40A-202ENST00000410080 PCNX2A6NKB5 2137 aa10□□□□□ -0.81
PRPF40A-202ENST00000410080 EDIL3O43854 480 aa10□□□□□ -0.81
PRPF40A-202ENST00000410080 NME1P15531 152 aaKnown RBP10□□□□□ -0.81
PRPF40A-202ENST00000410080 LPAR6P43657 344 aa10□□□□□ -0.81
PRPF40A-202ENST00000410080 UNQ9370/PRO34162Q6UXP9 181 aa10□□□□□ -0.81
PRPF40A-202ENST00000410080 GPBAR1Q8TDU6 330 aa10□□□□□ -0.81
PRPF40A-202ENST00000410080 UQCC2Q9BRT2 126 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms