RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 CKLFQ9UBR5 152 aa18.49■□□□□ 0.55
PTCD3-203ENST00000409783 AUP1Q9Y679 476 aa18.49■□□□□ 0.55
PTCD3-203ENST00000409783 JMJD1CQ15652 2540 aa18.49■□□□□ 0.55
PTCD3-203ENST00000409783 SRD5A1P18405 259 aa18.48■□□□□ 0.55
PTCD3-203ENST00000409783 OR3A4PP47883 348 aa18.48■□□□□ 0.55
PTCD3-203ENST00000409783 ZNF146Q15072 292 aa18.48■□□□□ 0.55
PTCD3-203ENST00000409783 KCTD21Q4G0X4 260 aa18.48■□□□□ 0.55
PTCD3-203ENST00000409783 BTNL3Q6UXE8 466 aa18.48■□□□□ 0.55
PTCD3-203ENST00000409783 SVOPQ8N4V2 548 aa18.48■□□□□ 0.55
PTCD3-203ENST00000409783 TMEM185AQ8NFB2 350 aa18.48■□□□□ 0.55
PTCD3-203ENST00000409783 Q8NFD4 153 aa18.48■□□□□ 0.55
PTCD3-203ENST00000409783 C8orf46Q8TAG6 207 aa18.48■□□□□ 0.55
PTCD3-203ENST00000409783 TNFAIP8L1Q8WVP5 186 aa18.48■□□□□ 0.55
PTCD3-203ENST00000409783 TMEM203Q969S6 136 aa18.48■□□□□ 0.55
PTCD3-203ENST00000409783 CPNE2Q96FN4 548 aaPredicted RBP18.48■□□□□ 0.55
PTCD3-203ENST00000409783 ELL3Q9HB65 397 aaPredicted RBP18.48■□□□□ 0.55
PTCD3-203ENST00000409783 RHOFQ9HBH0 211 aa18.48■□□□□ 0.55
PTCD3-203ENST00000409783 CUBNO60494 3623 aa18.48■□□□□ 0.55
PTCD3-203ENST00000409783 ZNF737O75373 536 aa18.47■□□□□ 0.55
PTCD3-203ENST00000409783 UCHL1P09936 223 aa18.47■□□□□ 0.55
PTCD3-203ENST00000409783 PPIAL4GP0DN37 164 aa18.47■□□□□ 0.55
PTCD3-203ENST00000409783 PRKACAP17612 351 aa18.47■□□□□ 0.55
PTCD3-203ENST00000409783 ZNF93P35789 620 aaPredicted RBP18.47■□□□□ 0.55
PTCD3-203ENST00000409783 PTGFRP43088 359 aa18.47■□□□□ 0.55
PTCD3-203ENST00000409783 COL10A1Q03692 680 aa18.47■□□□□ 0.55
PTCD3-203ENST00000409783 ELP2Q6IA86 826 aa18.47■□□□□ 0.55
PTCD3-203ENST00000409783 ZNF773Q6PK81 442 aa18.47■□□□□ 0.55
PTCD3-203ENST00000409783 PRIMA1Q86XR5 153 aa18.47■□□□□ 0.55
PTCD3-203ENST00000409783 GPER1Q99527 375 aa18.47■□□□□ 0.55
PTCD3-203ENST00000409783 MAS1P04201 325 aa18.46■□□□□ 0.55
PTCD3-203ENST00000409783 LIPFP07098 398 aa18.46■□□□□ 0.55
PTCD3-203ENST00000409783 CHRM2P08172 466 aa18.46■□□□□ 0.55
PTCD3-203ENST00000409783 DUSP1P28562 367 aa18.46■□□□□ 0.55
PTCD3-203ENST00000409783 ARMCX4Q5H9R4 360 aa18.46■□□□□ 0.55
PTCD3-203ENST00000409783 KLF17Q5JT82 389 aaPredicted RBP18.46■□□□□ 0.55
PTCD3-203ENST00000409783 SPIN3Q5JUX0 258 aa18.46■□□□□ 0.55
PTCD3-203ENST00000409783 CEACAM19Q7Z692 300 aa18.46■□□□□ 0.55
PTCD3-203ENST00000409783 DMRTB1Q96MA1 342 aa18.46■□□□□ 0.55
PTCD3-203ENST00000409783 MRI1Q9BV20 369 aa18.46■□□□□ 0.55
PTCD3-203ENST00000409783 DSCAML1Q8TD84 2053 aa18.46■□□□□ 0.55
PTCD3-203ENST00000409783 TMEM82A0PJX8 343 aa18.45■□□□□ 0.54
PTCD3-203ENST00000409783 K7N7A8 449 aa18.45■□□□□ 0.54
PTCD3-203ENST00000409783 HAND1O96004 215 aa18.45■□□□□ 0.54
PTCD3-203ENST00000409783 TK1P04183 234 aa18.45■□□□□ 0.54
PTCD3-203ENST00000409783 MMP9P14780 707 aa18.45■□□□□ 0.54
PTCD3-203ENST00000409783 NDUFB7P17568 137 aa18.45■□□□□ 0.54
PTCD3-203ENST00000409783 PSMA1P25786 263 aaKnown RBP18.45■□□□□ 0.54
PTCD3-203ENST00000409783 SRP14P37108 136 aaKnown RBP18.45■□□□□ 0.54
PTCD3-203ENST00000409783 FGF12P61328 243 aa18.45■□□□□ 0.54
PTCD3-203ENST00000409783 TRAM1Q15629 374 aa18.45■□□□□ 0.54
PTCD3-203ENST00000409783 C17orf107Q6ZR85 190 aa18.45■□□□□ 0.54
PTCD3-203ENST00000409783 LRRTM1Q86UE6 522 aa18.45■□□□□ 0.54
PTCD3-203ENST00000409783 CDH26Q8IXH8 852 aa18.45■□□□□ 0.54
PTCD3-203ENST00000409783 PNLDC1Q8NA58 520 aaKnown RBP18.45■□□□□ 0.54
PTCD3-203ENST00000409783 H1FXQ92522 213 aaKnown RBP18.45■□□□□ 0.54
PTCD3-203ENST00000409783 UPRTQ96BW1 309 aa18.45■□□□□ 0.54
PTCD3-203ENST00000409783 FAM234AQ9H0X4 552 aa18.45■□□□□ 0.54
PTCD3-203ENST00000409783 SIRPDQ9H106 197 aa18.45■□□□□ 0.54
PTCD3-203ENST00000409783 CDRT1O95170 752 aa18.44■□□□□ 0.54
PTCD3-203ENST00000409783 GABRA5P31644 462 aa18.44■□□□□ 0.54
PTCD3-203ENST00000409783 MTNR1BP49286 362 aa18.44■□□□□ 0.54
PTCD3-203ENST00000409783 SNU13P55769 128 aaKnown RBP18.44■□□□□ 0.54
PTCD3-203ENST00000409783 FABP5Q01469 135 aa18.44■□□□□ 0.54
PTCD3-203ENST00000409783 FIP1L1Q6UN15 594 aaKnown RBP18.44■□□□□ 0.54
PTCD3-203ENST00000409783 TEX29Q8N6K0 151 aa18.44■□□□□ 0.54
PTCD3-203ENST00000409783 NANPQ8TBE9 248 aa18.44■□□□□ 0.54
PTCD3-203ENST00000409783 PHYHIPQ92561 330 aa18.44■□□□□ 0.54
PTCD3-203ENST00000409783 CNTD2Q9H8S5 307 aa18.44■□□□□ 0.54
PTCD3-203ENST00000409783 NDUFB11Q9NX14 153 aa18.44■□□□□ 0.54
PTCD3-203ENST00000409783 IL36GQ9NZH8 169 aa18.44■□□□□ 0.54
PTCD3-203ENST00000409783 GSTK1Q9Y2Q3 226 aa18.44■□□□□ 0.54
PTCD3-203ENST00000409783 PSPNO60542 156 aa18.43■□□□□ 0.54
PTCD3-203ENST00000409783 RGS9O75916 674 aaPredicted RBP18.43■□□□□ 0.54
PTCD3-203ENST00000409783 CD37P11049 281 aa18.43■□□□□ 0.54
PTCD3-203ENST00000409783 CAPZA1P52907 286 aa18.43■□□□□ 0.54
PTCD3-203ENST00000409783 Q6P435 159 aa18.43■□□□□ 0.54
PTCD3-203ENST00000409783 OR51T1Q8NGJ9 327 aa18.43■□□□□ 0.54
PTCD3-203ENST00000409783 OR10K1Q8NGX5 313 aa18.43■□□□□ 0.54
PTCD3-203ENST00000409783 FCGR1BQ92637 280 aa18.43■□□□□ 0.54
PTCD3-203ENST00000409783 SNX22Q96L94 193 aa18.43■□□□□ 0.54
PTCD3-203ENST00000409783 C1orf147Q96MC9 270 aaPredicted RBP18.43■□□□□ 0.54
PTCD3-203ENST00000409783 TBX15Q96SF7 602 aa18.43■□□□□ 0.54
PTCD3-203ENST00000409783 FAM192AQ9GZU8 254 aa18.43■□□□□ 0.54
PTCD3-203ENST00000409783 TRBV23-1A0A0A0MS06 115 aa18.42■□□□□ 0.54
PTCD3-203ENST00000409783 MEGF11A6BM72 1044 aa18.42■□□□□ 0.54
PTCD3-203ENST00000409783 SRMP19623 302 aa18.42■□□□□ 0.54
PTCD3-203ENST00000409783 LMO1P25800 156 aa18.42■□□□□ 0.54
PTCD3-203ENST00000409783 ARF6P62330 175 aa18.42■□□□□ 0.54
PTCD3-203ENST00000409783 HSD17B12Q53GQ0 312 aa18.42■□□□□ 0.54
PTCD3-203ENST00000409783 CD200R1LQ6Q8B3 271 aa18.42■□□□□ 0.54
PTCD3-203ENST00000409783 JAGN1Q8N5M9 183 aa18.42■□□□□ 0.54
PTCD3-203ENST00000409783 NKAIN3Q8N8D7 197 aa18.42■□□□□ 0.54
PTCD3-203ENST00000409783 ASCC1Q8N9N2 400 aaKnown RBP18.42■□□□□ 0.54
PTCD3-203ENST00000409783 OR4D6Q8NGJ1 314 aa18.42■□□□□ 0.54
PTCD3-203ENST00000409783 MUL1Q969V5 352 aa18.42■□□□□ 0.54
PTCD3-203ENST00000409783 WDFY2Q96P53 400 aa18.42■□□□□ 0.54
PTCD3-203ENST00000409783 TCF7L1Q9HCS4 588 aa18.42■□□□□ 0.54
PTCD3-203ENST00000409783 C19orf12Q9NSK7 152 aa18.42■□□□□ 0.54
PTCD3-203ENST00000409783 ING4Q9UNL4 249 aa18.42■□□□□ 0.54
PTCD3-203ENST00000409783 SH2D1BO14796 132 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms