RNA–Protein interactions for RNA: ENST00000409739.2

TRAF3IP1-203, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-203ENST00000409739 CPNE2Q96FN4 548 aaPredicted RBP25.65■■□□□ 1.7
TRAF3IP1-203ENST00000409739 OR14A2Q96R54 314 aa25.65■■□□□ 1.7
TRAF3IP1-203ENST00000409739 MS4A7Q9GZW8 240 aaPredicted RBP25.65■■□□□ 1.7
TRAF3IP1-203ENST00000409739 FAM234AQ9H0X4 552 aa25.65■■□□□ 1.7
TRAF3IP1-203ENST00000409739 HMG20AQ9NP66 347 aa25.65■■□□□ 1.7
TRAF3IP1-203ENST00000409739 C19orf12Q9NSK7 152 aa25.65■■□□□ 1.7
TRAF3IP1-203ENST00000409739 RNF212BA8MTL3 300 aa25.64■■□□□ 1.7
TRAF3IP1-203ENST00000409739 MAGEB3O15480 346 aa25.64■■□□□ 1.7
TRAF3IP1-203ENST00000409739 RGS10O43665 173 aa25.64■■□□□ 1.7
TRAF3IP1-203ENST00000409739 ZNF737O75373 536 aa25.64■■□□□ 1.7
TRAF3IP1-203ENST00000409739 HAND1O96004 215 aa25.64■■□□□ 1.7
TRAF3IP1-203ENST00000409739 CHRM2P08172 466 aa25.64■■□□□ 1.7
TRAF3IP1-203ENST00000409739 TMEM225BP0DP42 221 aa25.64■■□□□ 1.7
TRAF3IP1-203ENST00000409739 IGFBP3P17936 291 aaPredicted RBP25.64■■□□□ 1.7
TRAF3IP1-203ENST00000409739 HILS1P60008 231 aa25.64■■□□□ 1.7
TRAF3IP1-203ENST00000409739 SPHARQ15513 63 aa25.64■■□□□ 1.7
TRAF3IP1-203ENST00000409739 BRD3OSQ6XYD6 125 aa25.64■■□□□ 1.7
TRAF3IP1-203ENST00000409739 VMO1Q7Z5L0 202 aa25.64■■□□□ 1.7
TRAF3IP1-203ENST00000409739 CMTM4Q8IZR5 234 aa25.64■■□□□ 1.7
TRAF3IP1-203ENST00000409739 TMEM158Q8WZ71 300 aa25.64■■□□□ 1.7
TRAF3IP1-203ENST00000409739 ZNF184Q99676 751 aaPredicted RBP25.64■■□□□ 1.7
TRAF3IP1-203ENST00000409739 SEBOXQ9HB31 216 aaPredicted RBP25.64■■□□□ 1.7
TRAF3IP1-203ENST00000409739 TRBV5-7A0A0A0MS05 114 aa25.63■■□□□ 1.69
TRAF3IP1-203ENST00000409739 K7N7A8 449 aa25.63■■□□□ 1.69
TRAF3IP1-203ENST00000409739 GABRPO00591 440 aa25.63■■□□□ 1.69
TRAF3IP1-203ENST00000409739 ALDOBP05062 364 aa25.63■■□□□ 1.69
TRAF3IP1-203ENST00000409739 SNU13P55769 128 aaKnown RBP25.63■■□□□ 1.69
TRAF3IP1-203ENST00000409739 ZNF146Q15072 292 aa25.63■■□□□ 1.69
TRAF3IP1-203ENST00000409739 PDCD1Q15116 288 aa25.63■■□□□ 1.69
TRAF3IP1-203ENST00000409739 SPIN3Q5JUX0 258 aa25.63■■□□□ 1.69
TRAF3IP1-203ENST00000409739 SATL1Q86VE3 508 aa25.63■■□□□ 1.69
TRAF3IP1-203ENST00000409739 FAM185AQ8N0U4 392 aa25.63■■□□□ 1.69
TRAF3IP1-203ENST00000409739 Q8N7P7 452 aa25.63■■□□□ 1.69
TRAF3IP1-203ENST00000409739 TMEM138Q9NPI0 162 aa25.63■■□□□ 1.69
TRAF3IP1-203ENST00000409739 SOX21Q9Y651 276 aaPredicted RBP25.63■■□□□ 1.69
TRAF3IP1-203ENST00000409739 CENPVL3A0A0U1RRI6 287 aa25.62■■□□□ 1.69
TRAF3IP1-203ENST00000409739 FSTP19883 344 aa25.62■■□□□ 1.69
TRAF3IP1-203ENST00000409739 DUSP1P28562 367 aa25.62■■□□□ 1.69
TRAF3IP1-203ENST00000409739 MED22Q15528 200 aa25.62■■□□□ 1.69
TRAF3IP1-203ENST00000409739 RBM48Q5RL73 367 aaKnown RBP25.62■■□□□ 1.69
TRAF3IP1-203ENST00000409739 LHX4Q969G2 390 aa25.62■■□□□ 1.69
TRAF3IP1-203ENST00000409739 ZNF48Q96MX3 618 aaPredicted RBP25.62■■□□□ 1.69
TRAF3IP1-203ENST00000409739 GPER1Q99527 375 aa25.62■■□□□ 1.69
TRAF3IP1-203ENST00000409739 NKX3-1Q99801 234 aaPredicted RBP25.62■■□□□ 1.69
TRAF3IP1-203ENST00000409739 RHOFQ9HBH0 211 aa25.62■■□□□ 1.69
TRAF3IP1-203ENST00000409739 TMEM82A0PJX8 343 aa25.61■■□□□ 1.69
TRAF3IP1-203ENST00000409739 GPX5O75715 221 aa25.61■■□□□ 1.69
TRAF3IP1-203ENST00000409739 BDKRB2P30411 391 aa25.61■■□□□ 1.69
TRAF3IP1-203ENST00000409739 RPL31P62899 125 aaKnown RBP25.61■■□□□ 1.69
TRAF3IP1-203ENST00000409739 DDI2Q5TDH0 399 aa25.61■■□□□ 1.69
TRAF3IP1-203ENST00000409739 RUSC1-AS1Q66K80 236 aa25.61■■□□□ 1.69
TRAF3IP1-203ENST00000409739 PRSS48Q7RTY5 328 aa25.61■■□□□ 1.69
TRAF3IP1-203ENST00000409739 SIGLECL1Q8N7X8 197 aa25.61■■□□□ 1.69
TRAF3IP1-203ENST00000409739 PXT1Q8NFP0 134 aa25.61■■□□□ 1.69
TRAF3IP1-203ENST00000409739 TNFAIP8L1Q8WVP5 186 aa25.61■■□□□ 1.69
TRAF3IP1-203ENST00000409739 DERL3Q96Q80 235 aa25.61■■□□□ 1.69
TRAF3IP1-203ENST00000409739 SIRT7Q9NRC8 400 aa25.61■■□□□ 1.69
TRAF3IP1-203ENST00000409739 TRAV8-7A0A075B6U6 113 aa25.6■■□□□ 1.69
TRAF3IP1-203ENST00000409739 A0A1W2PPK0 400 aa25.6■■□□□ 1.69
TRAF3IP1-203ENST00000409739 MAGEA13PA6NCF6 341 aa25.6■■□□□ 1.69
TRAF3IP1-203ENST00000409739 M0R1W7 72 aa25.6■■□□□ 1.69
TRAF3IP1-203ENST00000409739 C17orf107Q6ZR85 190 aa25.6■■□□□ 1.69
TRAF3IP1-203ENST00000409739 OR4M1Q8NGD0 313 aa25.6■■□□□ 1.69
TRAF3IP1-203ENST00000409739 CCDC90BQ9GZT6 254 aa25.6■■□□□ 1.69
TRAF3IP1-203ENST00000409739 FAM192AQ9GZU8 254 aa25.6■■□□□ 1.69
TRAF3IP1-203ENST00000409739 ESM1Q9NQ30 184 aa25.6■■□□□ 1.69
TRAF3IP1-203ENST00000409739 CKLFQ9UBR5 152 aa25.6■■□□□ 1.69
TRAF3IP1-203ENST00000409739 GSTK1Q9Y2Q3 226 aa25.6■■□□□ 1.69
TRAF3IP1-203ENST00000409739 DLX1P56177 255 aa25.59■■□□□ 1.69
TRAF3IP1-203ENST00000409739 BPIFB3P59826 476 aa25.59■■□□□ 1.69
TRAF3IP1-203ENST00000409739 OR8H2Q8N162 312 aa25.59■■□□□ 1.69
TRAF3IP1-203ENST00000409739 SNX22Q96L94 193 aa25.59■■□□□ 1.69
TRAF3IP1-203ENST00000409739 JMJD8Q96S16 334 aa25.59■■□□□ 1.69
TRAF3IP1-203ENST00000409739 GLS2Q9UI32 602 aa25.59■■□□□ 1.69
TRAF3IP1-203ENST00000409739 BLOC1S6Q9UL45 172 aa25.59■■□□□ 1.69
TRAF3IP1-203ENST00000409739 IGHV1-69DA0A0B4J2H0 117 aa25.58■■□□□ 1.69
TRAF3IP1-203ENST00000409739 IGHV1-69P01742 117 aa25.58■■□□□ 1.69
TRAF3IP1-203ENST00000409739 OR3A4PP47883 348 aa25.58■■□□□ 1.69
TRAF3IP1-203ENST00000409739 METAP1DQ6UB28 335 aaPredicted RBP25.58■■□□□ 1.69
TRAF3IP1-203ENST00000409739 C1orf122Q6ZSJ8 110 aa25.58■■□□□ 1.69
TRAF3IP1-203ENST00000409739 PHC2Q8IXK0 858 aa25.58■■□□□ 1.69
TRAF3IP1-203ENST00000409739 EXOSC4Q9NPD3 245 aaKnown RBP25.58■■□□□ 1.69
TRAF3IP1-203ENST00000409739 KIAA2026Q5HYC2 2103 aa25.58■■□□□ 1.69
TRAF3IP1-203ENST00000409739 PIN1P1O15428 100 aa25.57■■□□□ 1.68
TRAF3IP1-203ENST00000409739 PSPNO60542 156 aa25.57■■□□□ 1.68
TRAF3IP1-203ENST00000409739 ZNF93P35789 620 aaPredicted RBP25.57■■□□□ 1.68
TRAF3IP1-203ENST00000409739 TGFBR2P37173 567 aa25.57■■□□□ 1.68
TRAF3IP1-203ENST00000409739 MTNR1BP49286 362 aa25.57■■□□□ 1.68
TRAF3IP1-203ENST00000409739 PRB3Q04118 309 aaPredicted RBP25.57■■□□□ 1.68
TRAF3IP1-203ENST00000409739 TMEM200BQ69YZ2 307 aa25.57■■□□□ 1.68
TRAF3IP1-203ENST00000409739 PDZD9Q8IXQ8 264 aa25.57■■□□□ 1.68
TRAF3IP1-203ENST00000409739 ZDHHC22Q8N966 263 aa25.57■■□□□ 1.68
TRAF3IP1-203ENST00000409739 THRSPQ92748 146 aa25.57■■□□□ 1.68
TRAF3IP1-203ENST00000409739 CHST6Q9GZX3 395 aa25.57■■□□□ 1.68
TRAF3IP1-203ENST00000409739 Q9H521 79 aa25.57■■□□□ 1.68
TRAF3IP1-203ENST00000409739 FOXJ3Q9UPW0 622 aa25.57■■□□□ 1.68
TRAF3IP1-203ENST00000409739 MDFIC2A0A1B0GVS7 189 aa25.56■■□□□ 1.68
TRAF3IP1-203ENST00000409739 SIRPB1O00241 398 aa25.56■■□□□ 1.68
TRAF3IP1-203ENST00000409739 SH2D1BO14796 132 aa25.56■■□□□ 1.68
TRAF3IP1-203ENST00000409739 OR2H2O95918 312 aa25.56■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms