RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 ICE1Q9Y2F5 2266 aa10.55□□□□□ -0.72
CHMP3-204ENST00000409727 ZFYVE26Q68DK2 2539 aa10.54□□□□□ -0.72
CHMP3-204ENST00000409727 FAM221AA4D161 298 aa10.54□□□□□ -0.72
CHMP3-204ENST00000409727 SERPINE3A8MV23 424 aa10.54□□□□□ -0.72
CHMP3-204ENST00000409727 HS3ST1O14792 307 aa10.54□□□□□ -0.72
CHMP3-204ENST00000409727 PDCD6O75340 191 aa10.54□□□□□ -0.72
CHMP3-204ENST00000409727 IGHV1-46P01743 117 aa10.54□□□□□ -0.72
CHMP3-204ENST00000409727 PGA5P0DJD9 388 aa10.54□□□□□ -0.72
CHMP3-204ENST00000409727 SLC6A1P30531 599 aa10.54□□□□□ -0.72
CHMP3-204ENST00000409727 RAB25P57735 213 aa10.54□□□□□ -0.72
CHMP3-204ENST00000409727 TNFAIP6P98066 277 aaPredicted RBP10.54□□□□□ -0.72
CHMP3-204ENST00000409727 MZT1Q08AG7 82 aa10.54□□□□□ -0.72
CHMP3-204ENST00000409727 PNLIPRP3Q17RR3 467 aa10.54□□□□□ -0.72
CHMP3-204ENST00000409727 BEX5Q5H9J7 111 aa10.54□□□□□ -0.72
CHMP3-204ENST00000409727 PLET1Q6UQ28 207 aa10.54□□□□□ -0.72
CHMP3-204ENST00000409727 WDR82Q6UXN9 313 aa10.54□□□□□ -0.72
CHMP3-204ENST00000409727 BPIFB2Q8N4F0 458 aa10.54□□□□□ -0.72
CHMP3-204ENST00000409727 ZNF808Q8N4W9 903 aaPredicted RBP10.54□□□□□ -0.72
CHMP3-204ENST00000409727 BOLLQ8N9W6 283 aaKnown RBP10.54□□□□□ -0.72
CHMP3-204ENST00000409727 Q8NFD4 153 aa10.54□□□□□ -0.72
CHMP3-204ENST00000409727 OR4C16Q8NGL9 310 aa10.54□□□□□ -0.72
CHMP3-204ENST00000409727 ITLN1Q8WWA0 313 aa10.54□□□□□ -0.72
CHMP3-204ENST00000409727 NRIP2Q9BQI9 281 aa10.54□□□□□ -0.72
CHMP3-204ENST00000409727 EPG5Q9HCE0 2579 aa10.54□□□□□ -0.72
CHMP3-204ENST00000409727 PLCE1Q9P212 2302 aa10.53□□□□□ -0.72
CHMP3-204ENST00000409727 A0A1B0GWJ7 208 aa10.53□□□□□ -0.72
CHMP3-204ENST00000409727 ZNF736B4DX44 427 aaPredicted RBP10.53□□□□□ -0.72
CHMP3-204ENST00000409727 TPD52L2O43399 206 aaKnown RBP10.53□□□□□ -0.72
CHMP3-204ENST00000409727 C1QL1O75973 258 aa10.53□□□□□ -0.72
CHMP3-204ENST00000409727 AKAIN1P0CW23 69 aa10.53□□□□□ -0.72
CHMP3-204ENST00000409727 FUT3P21217 361 aa10.53□□□□□ -0.72
CHMP3-204ENST00000409727 RCVRNP35243 200 aa10.53□□□□□ -0.72
CHMP3-204ENST00000409727 CD200P41217 278 aa10.53□□□□□ -0.72
CHMP3-204ENST00000409727 TAS2R19P59542 299 aa10.53□□□□□ -0.72
CHMP3-204ENST00000409727 MRPS15P82914 257 aaKnown RBP10.53□□□□□ -0.72
CHMP3-204ENST00000409727 CARTPTQ16568 116 aa10.53□□□□□ -0.72
CHMP3-204ENST00000409727 RSBN1Q5VWQ0 802 aaPredicted RBP10.53□□□□□ -0.72
CHMP3-204ENST00000409727 STEAP1BQ6NZ63 245 aa10.53□□□□□ -0.72
CHMP3-204ENST00000409727 MOGAT3Q86VF5 341 aa10.53□□□□□ -0.72
CHMP3-204ENST00000409727 OR56B4Q8NH76 319 aa10.53□□□□□ -0.72
CHMP3-204ENST00000409727 LRRC29Q8WV35 223 aa10.53□□□□□ -0.72
CHMP3-204ENST00000409727 FBXW5Q969U6 566 aa10.53□□□□□ -0.72
CHMP3-204ENST00000409727 UPRTQ96BW1 309 aa10.53□□□□□ -0.72
CHMP3-204ENST00000409727 MEGF10Q96KG7 1140 aa10.53□□□□□ -0.72
CHMP3-204ENST00000409727 CACNG6Q9BXT2 260 aa10.53□□□□□ -0.72
CHMP3-204ENST00000409727 CISD1Q9NZ45 108 aaKnown RBP10.53□□□□□ -0.72
CHMP3-204ENST00000409727 OR14J1Q9UGF5 321 aa10.53□□□□□ -0.72
CHMP3-204ENST00000409727 HCFC1P51610 2035 aa10.53□□□□□ -0.72
CHMP3-204ENST00000409727 CFAP46Q8IYW2 2715 aa10.53□□□□□ -0.72
CHMP3-204ENST00000409727 TRAV6A0A075B6T7 132 aa10.53□□□□□ -0.72
CHMP3-204ENST00000409727 VSTM5A8MXK1 200 aa10.53□□□□□ -0.72
CHMP3-204ENST00000409727 DEFB108AA8MXU0 73 aa10.53□□□□□ -0.72
CHMP3-204ENST00000409727 C19orf84I3L1E1 186 aa10.53□□□□□ -0.72
CHMP3-204ENST00000409727 ZNF44P15621 663 aa10.53□□□□□ -0.72
CHMP3-204ENST00000409727 GLRA1P23415 457 aa10.53□□□□□ -0.72
CHMP3-204ENST00000409727 CEBPDP49716 269 aaPredicted RBP10.53□□□□□ -0.72
CHMP3-204ENST00000409727 ERVK11-1P61568 191 aa10.53□□□□□ -0.72
CHMP3-204ENST00000409727 SSBP1Q04837 148 aaKnown RBP10.53□□□□□ -0.72
CHMP3-204ENST00000409727 PLA1AQ53H76 456 aa10.53□□□□□ -0.72
CHMP3-204ENST00000409727 ZNF782Q6ZMW2 699 aaPredicted RBP10.53□□□□□ -0.72
CHMP3-204ENST00000409727 Q8IYB0 196 aa10.53□□□□□ -0.72
CHMP3-204ENST00000409727 TMEM229BQ8NBD8 167 aa10.53□□□□□ -0.72
CHMP3-204ENST00000409727 POC1AQ8NBT0 407 aa10.53□□□□□ -0.72
CHMP3-204ENST00000409727 NEK7Q8TDX7 302 aa10.53□□□□□ -0.72
CHMP3-204ENST00000409727 RDH5Q92781 318 aa10.53□□□□□ -0.72
CHMP3-204ENST00000409727 CMSS1Q9BQ75 279 aaKnown RBP10.53□□□□□ -0.72
CHMP3-204ENST00000409727 C7orf50Q9BRJ6 194 aaKnown RBP10.53□□□□□ -0.72
CHMP3-204ENST00000409727 TINAGL1Q9GZM7 467 aaPredicted RBP10.53□□□□□ -0.72
CHMP3-204ENST00000409727 TLNRD1Q9H1K6 362 aa10.53□□□□□ -0.72
CHMP3-204ENST00000409727 DPAGT1Q9H3H5 408 aa10.53□□□□□ -0.72
CHMP3-204ENST00000409727 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.53□□□□□ -0.72
CHMP3-204ENST00000409727 NUDT15Q9NV35 164 aa10.53□□□□□ -0.72
CHMP3-204ENST00000409727 ING3Q9NXR8 418 aa10.53□□□□□ -0.72
CHMP3-204ENST00000409727 HSF4Q9ULV5 492 aa10.53□□□□□ -0.72
CHMP3-204ENST00000409727 M0R233 179 aa10.52□□□□□ -0.73
CHMP3-204ENST00000409727 SIRPB1O00241 398 aa10.52□□□□□ -0.73
CHMP3-204ENST00000409727 DEGS1O15121 323 aa10.52□□□□□ -0.73
CHMP3-204ENST00000409727 RAB3DO95716 219 aa10.52□□□□□ -0.73
CHMP3-204ENST00000409727 PMP2P02689 132 aa10.52□□□□□ -0.73
CHMP3-204ENST00000409727 TFF1P04155 84 aa10.52□□□□□ -0.73
CHMP3-204ENST00000409727 AGAP20933 346 aa10.52□□□□□ -0.73
CHMP3-204ENST00000409727 HRH1P35367 487 aa10.52□□□□□ -0.73
CHMP3-204ENST00000409727 FAUP35544 74 aaKnown RBP10.52□□□□□ -0.73
CHMP3-204ENST00000409727 CCL8P80075 99 aa10.52□□□□□ -0.73
CHMP3-204ENST00000409727 ARL6IP1Q15041 203 aa10.52□□□□□ -0.73
CHMP3-204ENST00000409727 NHLRC3Q5JS37 347 aa10.52□□□□□ -0.73
CHMP3-204ENST00000409727 SNAPC3Q92966 411 aa10.52□□□□□ -0.73
CHMP3-204ENST00000409727 FAIMQ9NVQ4 179 aa10.52□□□□□ -0.73
CHMP3-204ENST00000409727 ZDHHC8Q9ULC8 765 aa10.52□□□□□ -0.73
CHMP3-204ENST00000409727 ROS1P08922 2347 aa10.52□□□□□ -0.73
CHMP3-204ENST00000409727 TCRBP04435 133 aa10.51□□□□□ -0.73
CHMP3-204ENST00000409727 AMY2BP19961 511 aa10.51□□□□□ -0.73
CHMP3-204ENST00000409727 TNFSF4P23510 183 aa10.51□□□□□ -0.73
CHMP3-204ENST00000409727 MPV17LQ2QL34 196 aa10.51□□□□□ -0.73
CHMP3-204ENST00000409727 SUMF2Q8NBJ7 301 aa10.51□□□□□ -0.73
CHMP3-204ENST00000409727 DUSP18Q8NEJ0 188 aa10.51□□□□□ -0.73
CHMP3-204ENST00000409727 OR51S1Q8NGJ8 323 aa10.51□□□□□ -0.73
CHMP3-204ENST00000409727 LILRB1Q8NHL6 650 aaPredicted RBP10.51□□□□□ -0.73
CHMP3-204ENST00000409727 FN3KRPQ9HA64 309 aa10.51□□□□□ -0.73
CHMP3-204ENST00000409727 CHMP1AQ9HD42 196 aaPredicted RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms