RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 NCR3LG1Q68D85 454 aa7.47□□□□□ -1.21
SCN9A-203ENST00000409672 GDPGP1Q6ZNW5 385 aa7.47□□□□□ -1.21
SCN9A-203ENST00000409672 PIMREGQ9BSJ6 248 aa7.47□□□□□ -1.21
SCN9A-203ENST00000409672 NDUFB11Q9NX14 153 aa7.47□□□□□ -1.21
SCN9A-203ENST00000409672 B9D1Q9UPM9 204 aa7.47□□□□□ -1.21
SCN9A-203ENST00000409672 POLEQ07864 2286 aa7.47□□□□□ -1.21
SCN9A-203ENST00000409672 KIAA1324LA8MWY0 1029 aaPredicted RBP7.47□□□□□ -1.21
SCN9A-203ENST00000409672 FAM87AP0C7U9 286 aa7.47□□□□□ -1.21
SCN9A-203ENST00000409672 EMC4Q5J8M3 183 aa7.47□□□□□ -1.21
SCN9A-203ENST00000409672 PRNTQ86SH4 94 aa7.47□□□□□ -1.21
SCN9A-203ENST00000409672 MYPOPQ86VE0 399 aaPredicted RBP7.47□□□□□ -1.21
SCN9A-203ENST00000409672 TMEM116Q8NCL8 245 aa7.47□□□□□ -1.21
SCN9A-203ENST00000409672 C16orf92Q96LL3 132 aa7.47□□□□□ -1.21
SCN9A-203ENST00000409672 NSG2Q9Y328 171 aa7.47□□□□□ -1.21
SCN9A-203ENST00000409672 A0A1W2PN81 502 aa7.47□□□□□ -1.21
SCN9A-203ENST00000409672 SMPD2O60906 423 aa7.47□□□□□ -1.21
SCN9A-203ENST00000409672 PRSS1P07477 247 aa7.47□□□□□ -1.21
SCN9A-203ENST00000409672 CHRNA7P36544 502 aa7.47□□□□□ -1.21
SCN9A-203ENST00000409672 RPS19P39019 145 aaKnown RBP7.47□□□□□ -1.21
SCN9A-203ENST00000409672 TPRX1Q8N7U7 411 aa7.47□□□□□ -1.21
SCN9A-203ENST00000409672 DMRTA2Q96SC8 542 aa7.47□□□□□ -1.21
SCN9A-203ENST00000409672 DOK1Q99704 481 aa7.47□□□□□ -1.21
SCN9A-203ENST00000409672 IL17BQ9UHF5 180 aa7.47□□□□□ -1.21
SCN9A-203ENST00000409672 MMDQ15546 238 aa7.47□□□□□ -1.21
SCN9A-203ENST00000409672 OVCH2Q7RTZ1 564 aa7.47□□□□□ -1.21
SCN9A-203ENST00000409672 DUX5Q96PT3 197 aa7.47□□□□□ -1.21
SCN9A-203ENST00000409672 ABCA7Q8IZY2 2146 aa7.47□□□□□ -1.21
SCN9A-203ENST00000409672 ARPC4-TTLL3A0A0A6YYG9 625 aa7.47□□□□□ -1.21
SCN9A-203ENST00000409672 IGHV3-35A0A0C4DH35 117 aa7.47□□□□□ -1.21
SCN9A-203ENST00000409672 S100A11P31949 105 aa7.47□□□□□ -1.21
SCN9A-203ENST00000409672 TM4SF20Q53R12 229 aa7.47□□□□□ -1.21
SCN9A-203ENST00000409672 LINC01560Q8TB33 94 aa7.47□□□□□ -1.21
SCN9A-203ENST00000409672 FAM60AQ9NP50 221 aa7.47□□□□□ -1.21
SCN9A-203ENST00000409672 YAE1D1Q9NRH1 226 aa7.47□□□□□ -1.21
SCN9A-203ENST00000409672 TCRBV3S1A0A5B6 114 aa7.46□□□□□ -1.21
SCN9A-203ENST00000409672 FFAR1O14842 300 aa7.46□□□□□ -1.21
SCN9A-203ENST00000409672 SULT1A2P50226 295 aa7.46□□□□□ -1.21
SCN9A-203ENST00000409672 KISS1Q15726 138 aa7.46□□□□□ -1.21
SCN9A-203ENST00000409672 TOMM34Q15785 309 aaPredicted RBP7.46□□□□□ -1.21
SCN9A-203ENST00000409672 DYRK2Q92630 601 aa7.46□□□□□ -1.21
SCN9A-203ENST00000409672 MAP6Q96JE9 813 aa7.46□□□□□ -1.21
SCN9A-203ENST00000409672 ZDHHC11Q9H8X9 412 aa7.46□□□□□ -1.21
SCN9A-203ENST00000409672 C7orf72A4D263 438 aa7.46□□□□□ -1.21
SCN9A-203ENST00000409672 SELENOPP49908 381 aa7.46□□□□□ -1.21
SCN9A-203ENST00000409672 INSL4Q14641 139 aa7.46□□□□□ -1.21
SCN9A-203ENST00000409672 DND1Q8IYX4 353 aaKnown RBP7.46□□□□□ -1.21
SCN9A-203ENST00000409672 SSMEM1Q8WWF3 244 aa7.46□□□□□ -1.21
SCN9A-203ENST00000409672 SOSTQ9BQB4 213 aa7.46□□□□□ -1.21
SCN9A-203ENST00000409672 TMEM38AQ9H6F2 299 aa7.46□□□□□ -1.21
SCN9A-203ENST00000409672 ZDHHC8Q9ULC8 765 aa7.46□□□□□ -1.21
SCN9A-203ENST00000409672 DDX60LQ5H9U9 1706 aaKnown RBP7.46□□□□□ -1.21
SCN9A-203ENST00000409672 FBP1P09467 338 aa7.46□□□□□ -1.21
SCN9A-203ENST00000409672 KLK11Q9UBX7 282 aa7.46□□□□□ -1.21
SCN9A-203ENST00000409672 SSC5DA1L4H1 1573 aa7.46□□□□□ -1.21
SCN9A-203ENST00000409672 DOCK6Q96HP0 2047 aa7.46□□□□□ -1.21
SCN9A-203ENST00000409672 CTSVO60911 334 aa7.46□□□□□ -1.22
SCN9A-203ENST00000409672 ACAA2P42765 397 aaKnown RBP7.46□□□□□ -1.22
SCN9A-203ENST00000409672 LGALSLQ3ZCW2 172 aaPredicted RBP7.46□□□□□ -1.22
SCN9A-203ENST00000409672 SLC25A53Q5H9E4 307 aa7.46□□□□□ -1.22
SCN9A-203ENST00000409672 STAC2Q6ZMT1 411 aa7.46□□□□□ -1.22
SCN9A-203ENST00000409672 TP53I13Q8NBR0 393 aaPredicted RBP7.46□□□□□ -1.22
SCN9A-203ENST00000409672 EID2BQ96D98 161 aa7.46□□□□□ -1.22
SCN9A-203ENST00000409672 ATP5SQ99766 215 aa7.46□□□□□ -1.22
SCN9A-203ENST00000409672 NTMQ9P121 344 aa7.46□□□□□ -1.22
SCN9A-203ENST00000409672 CHD5Q8TDI0 1954 aa7.46□□□□□ -1.22
SCN9A-203ENST00000409672 FGF2P09038 288 aa7.46□□□□□ -1.22
SCN9A-203ENST00000409672 TSPO2Q5TGU0 170 aa7.46□□□□□ -1.22
SCN9A-203ENST00000409672 D2HGDHQ8N465 521 aa7.46□□□□□ -1.22
SCN9A-203ENST00000409672 SLC25A10Q9UBX3 287 aaPredicted RBP7.46□□□□□ -1.22
SCN9A-203ENST00000409672 CES1P1Q9UKY3 287 aa7.46□□□□□ -1.22
SCN9A-203ENST00000409672 A0A0A6YYJ9 748 aa7.46□□□□□ -1.22
SCN9A-203ENST00000409672 A0A1B0GTQ1 180 aa7.46□□□□□ -1.22
SCN9A-203ENST00000409672 VSIG10L2P0DP72 767 aa7.46□□□□□ -1.22
SCN9A-203ENST00000409672 ZFP36L2P47974 494 aaKnown RBP7.46□□□□□ -1.22
SCN9A-203ENST00000409672 OR13F1Q8NGS4 319 aa7.46□□□□□ -1.22
SCN9A-203ENST00000409672 MARC2Q969Z3 335 aa7.46□□□□□ -1.22
SCN9A-203ENST00000409672 UCN2Q96RP3 112 aa7.46□□□□□ -1.22
SCN9A-203ENST00000409672 GHITMQ9H3K2 345 aa7.46□□□□□ -1.22
SCN9A-203ENST00000409672 ACER3Q9NUN7 267 aa7.46□□□□□ -1.22
SCN9A-203ENST00000409672 FCARP24071 287 aa7.46□□□□□ -1.22
SCN9A-203ENST00000409672 DCTDP32321 178 aa7.46□□□□□ -1.22
SCN9A-203ENST00000409672 TWIST1Q15672 202 aa7.46□□□□□ -1.22
SCN9A-203ENST00000409672 OR8G5Q8NG78 346 aa7.46□□□□□ -1.22
SCN9A-203ENST00000409672 ADIPOR1Q96A54 375 aa7.46□□□□□ -1.22
SCN9A-203ENST00000409672 MVB12AQ96EY5 273 aa7.46□□□□□ -1.22
SCN9A-203ENST00000409672 PACRGQ96M98 296 aaPredicted RBP7.46□□□□□ -1.22
SCN9A-203ENST00000409672 HELTA6NFD8 242 aa7.46□□□□□ -1.22
SCN9A-203ENST00000409672 CCL3P10147 92 aa7.46□□□□□ -1.22
SCN9A-203ENST00000409672 ETV6P41212 452 aa7.46□□□□□ -1.22
SCN9A-203ENST00000409672 GNG4P50150 75 aa7.46□□□□□ -1.22
SCN9A-203ENST00000409672 TRAT1Q6PIZ9 186 aa7.46□□□□□ -1.22
SCN9A-203ENST00000409672 SCGB1D4Q6XE38 83 aa7.46□□□□□ -1.22
SCN9A-203ENST00000409672 CYS1Q717R9 158 aa7.46□□□□□ -1.22
SCN9A-203ENST00000409672 TRAPPC1Q9Y5R8 145 aa7.46□□□□□ -1.22
SCN9A-203ENST00000409672 AKAP6Q13023 2319 aa7.46□□□□□ -1.22
SCN9A-203ENST00000409672 IGLV3-10A0A075B6K4 115 aa7.45□□□□□ -1.22
SCN9A-203ENST00000409672 LIFP15018 202 aa7.45□□□□□ -1.22
SCN9A-203ENST00000409672 GCAP28676 217 aa7.45□□□□□ -1.22
SCN9A-203ENST00000409672 TRA2AQ13595 282 aaKnown RBP eCLIP7.45□□□□□ -1.22
SCN9A-203ENST00000409672 AMMECR1LQ6DCA0 310 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms