RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 NLKQ9UBE8 527 aa13.85□□□□□ -0.19
TSPAN4-208ENST00000409531 GLS2Q9UI32 602 aa13.85□□□□□ -0.19
TSPAN4-208ENST00000409531 ETV7Q9Y603 341 aa13.85□□□□□ -0.19
TSPAN4-208ENST00000409531 TLN2Q9Y4G6 2542 aa13.84□□□□□ -0.19
TSPAN4-208ENST00000409531 A0A096LNT2 108 aa13.84□□□□□ -0.19
TSPAN4-208ENST00000409531 TMEM14DPA8MWL7 114 aa13.84□□□□□ -0.19
TSPAN4-208ENST00000409531 VWC2LB2RUY7 222 aa13.84□□□□□ -0.19
TSPAN4-208ENST00000409531 WNT9BO14905 357 aa13.84□□□□□ -0.19
TSPAN4-208ENST00000409531 KNG1P01042 644 aa13.84□□□□□ -0.19
TSPAN4-208ENST00000409531 MGMTP16455 207 aa13.84□□□□□ -0.19
TSPAN4-208ENST00000409531 EGR1P18146 543 aa13.84□□□□□ -0.19
TSPAN4-208ENST00000409531 CD80P33681 288 aa13.84□□□□□ -0.19
TSPAN4-208ENST00000409531 MDH2P40926 338 aaKnown RBP13.84□□□□□ -0.19
TSPAN4-208ENST00000409531 LOXL1Q08397 574 aaPredicted RBP13.84□□□□□ -0.19
TSPAN4-208ENST00000409531 NHLRC3Q5JS37 347 aa13.84□□□□□ -0.19
TSPAN4-208ENST00000409531 Q71RC1 249 aaPredicted RBP13.84□□□□□ -0.19
TSPAN4-208ENST00000409531 LINC00596Q86U02 117 aa13.84□□□□□ -0.19
TSPAN4-208ENST00000409531 BATF2Q8N1L9 274 aa13.84□□□□□ -0.19
TSPAN4-208ENST00000409531 OR51T1Q8NGJ9 327 aa13.84□□□□□ -0.19
TSPAN4-208ENST00000409531 DCUN1D5Q9BTE7 237 aa13.84□□□□□ -0.19
TSPAN4-208ENST00000409531 URM1Q9BTM9 101 aaKnown RBP13.84□□□□□ -0.19
TSPAN4-208ENST00000409531 WDR13Q9H1Z4 485 aa13.84□□□□□ -0.19
TSPAN4-208ENST00000409531 RAB22AQ9UL26 194 aa13.84□□□□□ -0.19
TSPAN4-208ENST00000409531 SPATA2Q9UM82 520 aa13.84□□□□□ -0.19
TSPAN4-208ENST00000409531 ZANQ9Y493 2812 aa13.84□□□□□ -0.19
TSPAN4-208ENST00000409531 DNHD1Q96M86 4753 aa13.84□□□□□ -0.19
TSPAN4-208ENST00000409531 C3orf80F5H4A9 247 aa13.83□□□□□ -0.2
TSPAN4-208ENST00000409531 F8VVB4 439 aa13.83□□□□□ -0.2
TSPAN4-208ENST00000409531 F8VWA3 439 aa13.83□□□□□ -0.2
TSPAN4-208ENST00000409531 H3BUI4 141 aa13.83□□□□□ -0.2
TSPAN4-208ENST00000409531 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.83□□□□□ -0.2
TSPAN4-208ENST00000409531 NDUFA2O43678 99 aa13.83□□□□□ -0.2
TSPAN4-208ENST00000409531 MPIG6BO95866 241 aa13.83□□□□□ -0.2
TSPAN4-208ENST00000409531 IGHV2-70P01814 119 aa13.83□□□□□ -0.2
TSPAN4-208ENST00000409531 SNRPBP14678 240 aaKnown RBP13.83□□□□□ -0.2
TSPAN4-208ENST00000409531 RAB6AP20340 208 aa13.83□□□□□ -0.2
TSPAN4-208ENST00000409531 USF1P22415 310 aaPredicted RBP13.83□□□□□ -0.2
TSPAN4-208ENST00000409531 NR4A2P43354 598 aa13.83□□□□□ -0.2
TSPAN4-208ENST00000409531 RBM11P57052 281 aaKnown RBP13.83□□□□□ -0.2
TSPAN4-208ENST00000409531 QRFPP83859 136 aa13.83□□□□□ -0.2
TSPAN4-208ENST00000409531 IL13RA2Q14627 380 aa13.83□□□□□ -0.2
TSPAN4-208ENST00000409531 ZNF146Q15072 292 aa13.83□□□□□ -0.2
TSPAN4-208ENST00000409531 SFRP4Q6FHJ7 346 aaPredicted RBP13.83□□□□□ -0.2
TSPAN4-208ENST00000409531 LGALS14Q8TCE9 139 aa13.83□□□□□ -0.2
TSPAN4-208ENST00000409531 OR5V1Q9UGF6 321 aa13.83□□□□□ -0.2
TSPAN4-208ENST00000409531 ST3GAL6Q9Y274 331 aa13.83□□□□□ -0.2
TSPAN4-208ENST00000409531 WIPI2Q9Y4P8 454 aa13.83□□□□□ -0.2
TSPAN4-208ENST00000409531 A0A0B4J203 849 aa13.82□□□□□ -0.2
TSPAN4-208ENST00000409531 TMEM272A0A1B0GTI8 110 aa13.82□□□□□ -0.2
TSPAN4-208ENST00000409531 ISPDA4D126 451 aa13.82□□□□□ -0.2
TSPAN4-208ENST00000409531 FAM90A10PA6NDY2 464 aa13.82□□□□□ -0.2
TSPAN4-208ENST00000409531 FAM90A18PA6NE21 464 aa13.82□□□□□ -0.2
TSPAN4-208ENST00000409531 FAM90A16PA6NEW6 464 aa13.82□□□□□ -0.2
TSPAN4-208ENST00000409531 FAM90A20PA6NIJ5 464 aa13.82□□□□□ -0.2
TSPAN4-208ENST00000409531 FAM90A8PA6NJQ4 464 aa13.82□□□□□ -0.2
TSPAN4-208ENST00000409531 FAM90A7PA6NKC0 464 aa13.82□□□□□ -0.2
TSPAN4-208ENST00000409531 OR2AT4A6NND4 320 aa13.82□□□□□ -0.2
TSPAN4-208ENST00000409531 FAM90A22PA8MWA6 464 aa13.82□□□□□ -0.2
TSPAN4-208ENST00000409531 FAM90A12PA8MX19 464 aa13.82□□□□□ -0.2
TSPAN4-208ENST00000409531 FAM90A5PA8MXJ8 464 aa13.82□□□□□ -0.2
TSPAN4-208ENST00000409531 FAM90A23PA8MXZ1 464 aa13.82□□□□□ -0.2
TSPAN4-208ENST00000409531 SH2D1BO14796 132 aa13.82□□□□□ -0.2
TSPAN4-208ENST00000409531 LDLRAD4O15165 306 aa13.82□□□□□ -0.2
TSPAN4-208ENST00000409531 FAM90A15PP0C7V4 464 aa13.82□□□□□ -0.2
TSPAN4-208ENST00000409531 FAM90A13PP0C7W8 464 aa13.82□□□□□ -0.2
TSPAN4-208ENST00000409531 FAM90A14PP0C7W9 464 aa13.82□□□□□ -0.2
TSPAN4-208ENST00000409531 FAM90A24PP0C7X0 464 aa13.82□□□□□ -0.2
TSPAN4-208ENST00000409531 CPT2P23786 658 aa13.82□□□□□ -0.2
TSPAN4-208ENST00000409531 UNC119Q13432 240 aa13.82□□□□□ -0.2
TSPAN4-208ENST00000409531 ZMYND11Q15326 602 aa13.82□□□□□ -0.2
TSPAN4-208ENST00000409531 ZNF404Q494X3 552 aa13.82□□□□□ -0.2
TSPAN4-208ENST00000409531 TMEM155Q4W5P6 130 aa13.82□□□□□ -0.2
TSPAN4-208ENST00000409531 FAM201AQ5SY85 155 aa13.82□□□□□ -0.2
TSPAN4-208ENST00000409531 LRRC28Q86X40 367 aaPredicted RBP13.82□□□□□ -0.2
TSPAN4-208ENST00000409531 TMEM104Q8NE00 496 aa13.82□□□□□ -0.2
TSPAN4-208ENST00000409531 DEFB108BQ8NET1 73 aa13.82□□□□□ -0.2
TSPAN4-208ENST00000409531 FAM46BQ96A09 425 aa13.82□□□□□ -0.2
TSPAN4-208ENST00000409531 Q96M66 194 aa13.82□□□□□ -0.2
TSPAN4-208ENST00000409531 SELENOIQ9C0D9 397 aa13.82□□□□□ -0.2
TSPAN4-208ENST00000409531 DNTTIP1Q9H147 329 aa13.82□□□□□ -0.2
TSPAN4-208ENST00000409531 BANF2Q9H503 90 aa13.82□□□□□ -0.2
TSPAN4-208ENST00000409531 SEBOXQ9HB31 216 aaPredicted RBP13.82□□□□□ -0.2
TSPAN4-208ENST00000409531 DOCK11Q5JSL3 2073 aa13.82□□□□□ -0.2
TSPAN4-208ENST00000409531 ABCA1O95477 2261 aa13.82□□□□□ -0.2
TSPAN4-208ENST00000409531 A0A1W2PP11 408 aa13.81□□□□□ -0.2
TSPAN4-208ENST00000409531 METTL21EPA6NDL7 271 aa13.81□□□□□ -0.2
TSPAN4-208ENST00000409531 NKX6-3A6NJ46 265 aa13.81□□□□□ -0.2
TSPAN4-208ENST00000409531 ZNF205O95201 554 aa13.81□□□□□ -0.2
TSPAN4-208ENST00000409531 PAHP00439 452 aa13.81□□□□□ -0.2
TSPAN4-208ENST00000409531 PSG2P11465 335 aa13.81□□□□□ -0.2
TSPAN4-208ENST00000409531 RPS27AP62979 156 aaKnown RBP13.81□□□□□ -0.2
TSPAN4-208ENST00000409531 MPV17LQ2QL34 196 aa13.81□□□□□ -0.2
TSPAN4-208ENST00000409531 OR10K2Q6IF99 312 aa13.81□□□□□ -0.2
TSPAN4-208ENST00000409531 SPICQ8N5J4 248 aa13.81□□□□□ -0.2
TSPAN4-208ENST00000409531 C19orf18Q8NEA5 215 aa13.81□□□□□ -0.2
TSPAN4-208ENST00000409531 CMTM3Q96MX0 182 aa13.81□□□□□ -0.2
TSPAN4-208ENST00000409531 BPESC1Q9GZL8 116 aa13.81□□□□□ -0.2
TSPAN4-208ENST00000409531 SLIRPQ9GZT3 109 aaKnown RBP13.81□□□□□ -0.2
TSPAN4-208ENST00000409531 KCNK15Q9H427 330 aa13.81□□□□□ -0.2
TSPAN4-208ENST00000409531 TMEM165Q9HC07 324 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms