RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 TTTY10Q9BZA0 68 aa13.13□□□□□ -0.31
CHMP3-203ENST00000409225 ZNF286AQ9HBT8 521 aa13.13□□□□□ -0.31
CHMP3-203ENST00000409225 MTCH1Q9NZJ7 389 aa13.13□□□□□ -0.31
CHMP3-203ENST00000409225 GTF2A1LQ9UNN4 478 aa13.13□□□□□ -0.31
CHMP3-203ENST00000409225 FAM230AA0A1W2PPH8 454 aa13.12□□□□□ -0.31
CHMP3-203ENST00000409225 BUB1B-PAK6H3BSN5 160 aa13.12□□□□□ -0.31
CHMP3-203ENST00000409225 TOR1AO14656 332 aa13.12□□□□□ -0.31
CHMP3-203ENST00000409225 GDNFP39905 211 aa13.12□□□□□ -0.31
CHMP3-203ENST00000409225 RPS7P62081 194 aaKnown RBP13.12□□□□□ -0.31
CHMP3-203ENST00000409225 MFGE8Q08431 387 aaPredicted RBP13.12□□□□□ -0.31
CHMP3-203ENST00000409225 RBM39Q14498 530 aaKnown RBP13.12□□□□□ -0.31
CHMP3-203ENST00000409225 HLA-DRB5Q30154 266 aa13.12□□□□□ -0.31
CHMP3-203ENST00000409225 SLX4IPQ5VYV7 408 aa13.12□□□□□ -0.31
CHMP3-203ENST00000409225 ADAMTSL5Q6ZMM2 481 aa13.12□□□□□ -0.31
CHMP3-203ENST00000409225 LCNL1Q6ZST4 164 aa13.12□□□□□ -0.31
CHMP3-203ENST00000409225 COMMD1Q8N668 190 aa13.12□□□□□ -0.31
CHMP3-203ENST00000409225 CADM1Q9BY67 442 aaKnown RBP13.12□□□□□ -0.31
CHMP3-203ENST00000409225 DCLRE1BQ9H816 532 aa13.12□□□□□ -0.31
CHMP3-203ENST00000409225 IL36RNQ9UBH0 155 aa13.12□□□□□ -0.31
CHMP3-203ENST00000409225 DNAJB9Q9UBS3 223 aa13.12□□□□□ -0.31
CHMP3-203ENST00000409225 NUFIP1Q9UHK0 495 aaKnown RBP13.12□□□□□ -0.31
CHMP3-203ENST00000409225 UBE2J1Q9Y385 318 aaPredicted RBP13.12□□□□□ -0.31
CHMP3-203ENST00000409225 PRR32B1ATL7 298 aa13.11□□□□□ -0.31
CHMP3-203ENST00000409225 H3BN98 237 aa13.11□□□□□ -0.31
CHMP3-203ENST00000409225 PSPNO60542 156 aa13.11□□□□□ -0.31
CHMP3-203ENST00000409225 CCDC22O60826 627 aa13.11□□□□□ -0.31
CHMP3-203ENST00000409225 TTRP02766 147 aa13.11□□□□□ -0.31
CHMP3-203ENST00000409225 RPLP1P05386 114 aaKnown RBP13.11□□□□□ -0.31
CHMP3-203ENST00000409225 ZNF829Q3KNS6 432 aaPredicted RBP13.11□□□□□ -0.31
CHMP3-203ENST00000409225 ZNF260Q3ZCT1 412 aa13.11□□□□□ -0.31
CHMP3-203ENST00000409225 CCDC144NLQ6NUI1 221 aa13.11□□□□□ -0.31
CHMP3-203ENST00000409225 OVCH2Q7RTZ1 564 aa13.11□□□□□ -0.31
CHMP3-203ENST00000409225 SLC35E3Q7Z769 313 aa13.11□□□□□ -0.31
CHMP3-203ENST00000409225 EGFL6Q8IUX8 553 aa13.11□□□□□ -0.31
CHMP3-203ENST00000409225 C5orf56Q8N8D9 126 aa13.11□□□□□ -0.31
CHMP3-203ENST00000409225 BBS1Q8NFJ9 593 aa13.11□□□□□ -0.31
CHMP3-203ENST00000409225 EMG1Q92979 244 aaKnown RBP13.11□□□□□ -0.31
CHMP3-203ENST00000409225 CREB3L1Q96BA8 519 aa13.11□□□□□ -0.31
CHMP3-203ENST00000409225 NIPSNAP1Q9BPW8 284 aa13.11□□□□□ -0.31
CHMP3-203ENST00000409225 MROQ9BYG7 248 aa13.11□□□□□ -0.31
CHMP3-203ENST00000409225 GAL3ST2Q9H3Q3 398 aa13.11□□□□□ -0.31
CHMP3-203ENST00000409225 U3KQV3 271 aa13.11□□□□□ -0.31
CHMP3-203ENST00000409225 LY6LH3BQJ8 138 aa13.1□□□□□ -0.31
CHMP3-203ENST00000409225 MGST3O14880 152 aa13.1□□□□□ -0.31
CHMP3-203ENST00000409225 PRODHO43272 600 aa13.1□□□□□ -0.31
CHMP3-203ENST00000409225 DUSP1P28562 367 aa13.1□□□□□ -0.31
CHMP3-203ENST00000409225 P2RX3P56373 397 aa13.1□□□□□ -0.31
CHMP3-203ENST00000409225 HES1Q14469 280 aa13.1□□□□□ -0.31
CHMP3-203ENST00000409225 MICAQ29983 383 aa13.1□□□□□ -0.31
CHMP3-203ENST00000409225 DEGS2Q6QHC5 323 aa13.1□□□□□ -0.31
CHMP3-203ENST00000409225 HEPN1Q6WQI6 88 aa13.1□□□□□ -0.31
CHMP3-203ENST00000409225 CPOQ8IVL8 374 aa13.1□□□□□ -0.31
CHMP3-203ENST00000409225 STPG2Q8N412 459 aa13.1□□□□□ -0.31
CHMP3-203ENST00000409225 OR14K1Q8NGZ2 314 aa13.1□□□□□ -0.31
CHMP3-203ENST00000409225 ZMAT4Q9H898 229 aa13.1□□□□□ -0.31
CHMP3-203ENST00000409225 V9GYS6 101 aa13.1□□□□□ -0.31
CHMP3-203ENST00000409225 TRGV10A0A0A0MS01 117 aa13.09□□□□□ -0.31
CHMP3-203ENST00000409225 MRPL3P09001 348 aaKnown RBP13.09□□□□□ -0.31
CHMP3-203ENST00000409225 HSD17B1P14061 328 aa13.09□□□□□ -0.31
CHMP3-203ENST00000409225 TMEM11P17152 192 aa13.09□□□□□ -0.31
CHMP3-203ENST00000409225 CD34P28906 385 aa13.09□□□□□ -0.31
CHMP3-203ENST00000409225 OR3A1P47881 315 aa13.09□□□□□ -0.31
CHMP3-203ENST00000409225 RIDAP52758 137 aaKnown RBP13.09□□□□□ -0.31
CHMP3-203ENST00000409225 PRRX1P54821 245 aa13.09□□□□□ -0.31
CHMP3-203ENST00000409225 SNU13P55769 128 aaKnown RBP13.09□□□□□ -0.31
CHMP3-203ENST00000409225 ZNF91Q05481 1191 aa13.09□□□□□ -0.31
CHMP3-203ENST00000409225 HNF4GQ14541 408 aa13.09□□□□□ -0.31
CHMP3-203ENST00000409225 KIR2DS1Q14954 304 aa13.09□□□□□ -0.31
CHMP3-203ENST00000409225 TEX38Q6PEX7 206 aa13.09□□□□□ -0.31
CHMP3-203ENST00000409225 SLC25A26Q70HW3 274 aa13.09□□□□□ -0.31
CHMP3-203ENST00000409225 THNSL2Q86YJ6 484 aa13.09□□□□□ -0.31
CHMP3-203ENST00000409225 FOXRED2Q8IWF2 684 aa13.09□□□□□ -0.31
CHMP3-203ENST00000409225 OR56B4Q8NH76 319 aa13.09□□□□□ -0.31
CHMP3-203ENST00000409225 TOMM40LQ969M1 308 aa13.09□□□□□ -0.31
CHMP3-203ENST00000409225 CMTM5Q96DZ9 223 aa13.09□□□□□ -0.31
CHMP3-203ENST00000409225 CITED4Q96RK1 184 aa13.09□□□□□ -0.31
CHMP3-203ENST00000409225 YIPF3Q9GZM5 350 aa13.09□□□□□ -0.31
CHMP3-203ENST00000409225 IKZF2Q9UKS7 526 aa13.09□□□□□ -0.31
CHMP3-203ENST00000409225 SLC7A11Q9UPY5 501 aa13.09□□□□□ -0.31
CHMP3-203ENST00000409225 IGKV1-27A0A075B6S5 117 aa13.08□□□□□ -0.32
CHMP3-203ENST00000409225 FAM90A18PA6NE21 464 aa13.08□□□□□ -0.32
CHMP3-203ENST00000409225 FAM90A16PA6NEW6 464 aa13.08□□□□□ -0.32
CHMP3-203ENST00000409225 FAM90A20PA6NIJ5 464 aa13.08□□□□□ -0.32
CHMP3-203ENST00000409225 LINC01548A6NM66 108 aa13.08□□□□□ -0.32
CHMP3-203ENST00000409225 FAM90A9PA6NNJ1 464 aa13.08□□□□□ -0.32
CHMP3-203ENST00000409225 FAM90A12PA8MX19 464 aa13.08□□□□□ -0.32
CHMP3-203ENST00000409225 FAM90A5PA8MXJ8 464 aa13.08□□□□□ -0.32
CHMP3-203ENST00000409225 OOSP1A8MZH6 123 aa13.08□□□□□ -0.32
CHMP3-203ENST00000409225 IGHG2P01859 326 aa13.08□□□□□ -0.32
CHMP3-203ENST00000409225 FAM90A15PP0C7V4 464 aa13.08□□□□□ -0.32
CHMP3-203ENST00000409225 FAM90A13PP0C7W8 464 aa13.08□□□□□ -0.32
CHMP3-203ENST00000409225 FAM90A14PP0C7W9 464 aa13.08□□□□□ -0.32
CHMP3-203ENST00000409225 FAM90A24PP0C7X0 464 aa13.08□□□□□ -0.32
CHMP3-203ENST00000409225 CALCBP10092 127 aa13.08□□□□□ -0.32
CHMP3-203ENST00000409225 ERP29P30040 261 aaKnown RBP13.08□□□□□ -0.32
CHMP3-203ENST00000409225 KPNB1Q14974 876 aaKnown RBP13.08□□□□□ -0.32
CHMP3-203ENST00000409225 SLC35D3Q5M8T2 416 aa13.08□□□□□ -0.32
CHMP3-203ENST00000409225 UTF1Q5T230 341 aa13.08□□□□□ -0.32
CHMP3-203ENST00000409225 BCL2L15Q5TBC7 163 aa13.08□□□□□ -0.32
CHMP3-203ENST00000409225 ZNF679Q8IYX0 411 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms