RNA–Protein interactions for RNA: ENST00000409161.5

SHANK2-203, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 9,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-203ENST00000409161 FAHP16930 419 aa10.87□□□□□ -0.67
SHANK2-203ENST00000409161 GPR3P46089 330 aa10.87□□□□□ -0.67
SHANK2-203ENST00000409161 OR1D5P58170 312 aa10.87□□□□□ -0.67
SHANK2-203ENST00000409161 NTHL1P78549 312 aa10.87□□□□□ -0.67
SHANK2-203ENST00000409161 ACSM6Q6P461 480 aa10.87□□□□□ -0.67
SHANK2-203ENST00000409161 MRGPRGQ86SM5 289 aa10.87□□□□□ -0.67
SHANK2-203ENST00000409161 OR51B4Q9Y5P0 310 aa10.87□□□□□ -0.67
SHANK2-203ENST00000409161 GREB1Q4ZG55 1949 aa10.87□□□□□ -0.67
SHANK2-203ENST00000409161 KTI12Q96EK9 354 aaPredicted RBP10.87□□□□□ -0.67
SHANK2-203ENST00000409161 TINAGL1Q9GZM7 467 aaPredicted RBP10.87□□□□□ -0.67
SHANK2-203ENST00000409161 G3V3Y1 287 aa10.87□□□□□ -0.67
SHANK2-203ENST00000409161 SMPD2O60906 423 aa10.87□□□□□ -0.67
SHANK2-203ENST00000409161 ACAA2P42765 397 aaKnown RBP10.87□□□□□ -0.67
SHANK2-203ENST00000409161 CAPZBP47756 277 aa10.87□□□□□ -0.67
SHANK2-203ENST00000409161 SUCLG1P53597 346 aaKnown RBP10.87□□□□□ -0.67
SHANK2-203ENST00000409161 FOXO1Q12778 655 aa10.87□□□□□ -0.67
SHANK2-203ENST00000409161 IZUMO4Q1ZYL8 232 aa10.87□□□□□ -0.67
SHANK2-203ENST00000409161 SLC35E3Q7Z769 313 aa10.87□□□□□ -0.67
SHANK2-203ENST00000409161 SPACA5Q96QH8 159 aa10.87□□□□□ -0.67
SHANK2-203ENST00000409161 A0A087WUJ7 227 aa10.87□□□□□ -0.67
SHANK2-203ENST00000409161 NDUFB3O43676 98 aa10.87□□□□□ -0.67
SHANK2-203ENST00000409161 TIAL1Q01085 375 aaKnown RBP eCLIP10.87□□□□□ -0.675e-7■■■■■ 58.4
SHANK2-203ENST00000409161 INSM1Q01101 510 aaPredicted RBP10.87□□□□□ -0.67
SHANK2-203ENST00000409161 C12orf73Q69YU5 71 aa10.86□□□□□ -0.67
SHANK2-203ENST00000409161 MOB3BQ86TA1 216 aa10.86□□□□□ -0.67
SHANK2-203ENST00000409161 GMPPAQ96IJ6 420 aaPredicted RBP10.86□□□□□ -0.67
SHANK2-203ENST00000409161 MOGAT1Q96PD6 335 aa10.86□□□□□ -0.67
SHANK2-203ENST00000409161 TMPRSS13Q9BYE2 586 aa10.86□□□□□ -0.67
SHANK2-203ENST00000409161 COL22A1Q8NFW1 1626 aaPredicted RBP10.86□□□□□ -0.67
SHANK2-203ENST00000409161 LEUTXA8MZ59 168 aa10.86□□□□□ -0.67
SHANK2-203ENST00000409161 NOVP48745 357 aa10.86□□□□□ -0.67
SHANK2-203ENST00000409161 UBE2L3P68036 154 aaKnown RBP10.86□□□□□ -0.67
SHANK2-203ENST00000409161 TUSC5Q8IXB3 177 aa10.86□□□□□ -0.67
SHANK2-203ENST00000409161 TMPRSS11DO60235 418 aa10.86□□□□□ -0.67
SHANK2-203ENST00000409161 LHFPL5Q8TAF8 219 aa10.86□□□□□ -0.67
SHANK2-203ENST00000409161 SLC25A22Q9H936 323 aa10.86□□□□□ -0.67
SHANK2-203ENST00000409161 FBXL17Q9UF56 701 aa10.86□□□□□ -0.67
SHANK2-203ENST00000409161 WDR81Q562E7 1941 aa10.86□□□□□ -0.67
SHANK2-203ENST00000409161 AVPR2P30518 371 aa10.86□□□□□ -0.67
SHANK2-203ENST00000409161 PYCR3Q53H96 274 aa10.86□□□□□ -0.67
SHANK2-203ENST00000409161 FBXO46Q6PJ61 603 aaPredicted RBP10.86□□□□□ -0.67
SHANK2-203ENST00000409161 OR1L6Q8NGR2 347 aa10.86□□□□□ -0.67
SHANK2-203ENST00000409161 NT5CQ8TCD5 201 aa10.86□□□□□ -0.67
SHANK2-203ENST00000409161 PRR14Q9BWN1 585 aa10.86□□□□□ -0.67
SHANK2-203ENST00000409161 MT-ND6P03923 174 aa10.86□□□□□ -0.67
SHANK2-203ENST00000409161 CCL11P51671 97 aa10.86□□□□□ -0.67
SHANK2-203ENST00000409161 ADAT3Q96EY9 351 aaPredicted RBP10.86□□□□□ -0.67
SHANK2-203ENST00000409161 C1QTNF6Q9BXI9 259 aa10.86□□□□□ -0.67
SHANK2-203ENST00000409161 ACAA1P09110 424 aaPredicted RBP10.86□□□□□ -0.67
SHANK2-203ENST00000409161 SPNP16150 400 aa10.86□□□□□ -0.67
SHANK2-203ENST00000409161 JAG1P78504 1218 aa10.86□□□□□ -0.67
SHANK2-203ENST00000409161 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.86□□□□□ -0.675e-9■■■□□ 18.5
SHANK2-203ENST00000409161 RNF165Q6ZSG1 346 aa10.86□□□□□ -0.67
SHANK2-203ENST00000409161 SPACA9Q96E40 222 aaPredicted RBP10.86□□□□□ -0.67
SHANK2-203ENST00000409161 EXOGQ9Y2C4 368 aaKnown RBP10.86□□□□□ -0.67
SHANK2-203ENST00000409161 B4GALT1P15291 398 aa10.86□□□□□ -0.67
SHANK2-203ENST00000409161 UBE2V2Q15819 145 aa10.86□□□□□ -0.67
SHANK2-203ENST00000409161 YRDCQ86U90 279 aaKnown RBP10.86□□□□□ -0.67
SHANK2-203ENST00000409161 MCHR2Q969V1 340 aa10.86□□□□□ -0.67
SHANK2-203ENST00000409161 RNF186Q9NXI6 227 aa10.86□□□□□ -0.67
SHANK2-203ENST00000409161 RER1O15258 196 aa10.86□□□□□ -0.67
SHANK2-203ENST00000409161 ZNF253O75346 499 aa10.86□□□□□ -0.67
SHANK2-203ENST00000409161 CAMPP49913 170 aa10.86□□□□□ -0.67
SHANK2-203ENST00000409161 SIRT6Q8N6T7 355 aa10.86□□□□□ -0.67
SHANK2-203ENST00000409161 ZNF296Q8WUU4 475 aaPredicted RBP10.86□□□□□ -0.67
SHANK2-203ENST00000409161 ARHGAP5-AS1Q96IT6 56 aa10.86□□□□□ -0.67
SHANK2-203ENST00000409161 LINC00615Q96LM1 132 aaPredicted RBP10.86□□□□□ -0.67
SHANK2-203ENST00000409161 GMLQ99445 158 aa10.86□□□□□ -0.67
SHANK2-203ENST00000409161 OR5AC1P0C628 307 aa10.85□□□□□ -0.67
SHANK2-203ENST00000409161 UQCRFS1P47985 274 aa10.85□□□□□ -0.67
SHANK2-203ENST00000409161 CARFQ8N187 725 aa10.85□□□□□ -0.67
SHANK2-203ENST00000409161 ZNF385DQ9H6B1 395 aa10.85□□□□□ -0.67
SHANK2-203ENST00000409161 C20orf141Q9NUB4 165 aa10.85□□□□□ -0.67
SHANK2-203ENST00000409161 CRYABP02511 175 aaKnown RBP10.85□□□□□ -0.67
SHANK2-203ENST00000409161 ZNF141Q15928 474 aa10.85□□□□□ -0.67
SHANK2-203ENST00000409161 TMEM207Q6UWW9 146 aa10.85□□□□□ -0.67
SHANK2-203ENST00000409161 OR1N2Q8NGR9 330 aa10.85□□□□□ -0.67
SHANK2-203ENST00000409161 RAB37Q96AX2 223 aa10.85□□□□□ -0.67
SHANK2-203ENST00000409161 ZNF707Q96C28 371 aaPredicted RBP10.85□□□□□ -0.67
SHANK2-203ENST00000409161 NAGKQ9UJ70 344 aa10.85□□□□□ -0.67
SHANK2-203ENST00000409161 DNASE2O00115 360 aaPredicted RBP10.85□□□□□ -0.67
SHANK2-203ENST00000409161 CCR5P51681 352 aa10.85□□□□□ -0.67
SHANK2-203ENST00000409161 METAP1P53582 386 aa10.85□□□□□ -0.67
SHANK2-203ENST00000409161 FNDC7Q5VTL7 733 aa10.85□□□□□ -0.67
SHANK2-203ENST00000409161 WDR74Q6RFH5 385 aaPredicted RBP10.85□□□□□ -0.67
SHANK2-203ENST00000409161 GLCCI1Q86VQ1 547 aa10.85□□□□□ -0.67
SHANK2-203ENST00000409161 OR2D3Q8NGH3 330 aa10.85□□□□□ -0.67
SHANK2-203ENST00000409161 OR13G1Q8NGZ3 307 aa10.85□□□□□ -0.67
SHANK2-203ENST00000409161 TMEM208Q9BTX3 173 aa10.85□□□□□ -0.67
SHANK2-203ENST00000409161 PCNX2A6NKB5 2137 aa10.85□□□□□ -0.67
SHANK2-203ENST00000409161 PHF3Q92576 2039 aaKnown RBP10.85□□□□□ -0.67
SHANK2-203ENST00000409161 GEMIN2O14893 280 aaKnown RBP10.85□□□□□ -0.67
SHANK2-203ENST00000409161 ONECUT2O95948 504 aa10.85□□□□□ -0.67
SHANK2-203ENST00000409161 IGHV3-9P01782 118 aa10.85□□□□□ -0.67
SHANK2-203ENST00000409161 PLP1P60201 277 aa10.85□□□□□ -0.67
SHANK2-203ENST00000409161 PMCHL1Q16048 86 aa10.85□□□□□ -0.67
SHANK2-203ENST00000409161 TRAF4Q9BUZ4 470 aaPredicted RBP10.85□□□□□ -0.67
SHANK2-203ENST00000409161 PARP11Q9NR21 331 aa10.85□□□□□ -0.67
SHANK2-203ENST00000409161 ACTL6AO96019 429 aa10.85□□□□□ -0.67
SHANK2-203ENST00000409161 DYNLT3P51808 116 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms