RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 NPAS4Q8IUM7 802 aa11.18□□□□□ -0.62
HERC3-203ENST00000407637 LGI3Q8N145 548 aa11.18□□□□□ -0.62
HERC3-203ENST00000407637 ARHGEF39Q8N4T4 335 aa11.18□□□□□ -0.62
HERC3-203ENST00000407637 OR5D14Q8NGL3 314 aa11.18□□□□□ -0.62
HERC3-203ENST00000407637 NT5CQ8TCD5 201 aa11.18□□□□□ -0.62
HERC3-203ENST00000407637 NAA60Q9H7X0 242 aa11.18□□□□□ -0.62
HERC3-203ENST00000407637 GLRX2Q9NS18 164 aa11.18□□□□□ -0.62
HERC3-203ENST00000407637 TRAPPC6AO75865 159 aa11.17□□□□□ -0.62
HERC3-203ENST00000407637 SMIM10L1P0DMW3 83 aa11.17□□□□□ -0.62
HERC3-203ENST00000407637 IL24Q13007 206 aa11.17□□□□□ -0.62
HERC3-203ENST00000407637 TCEA2Q15560 299 aa11.17□□□□□ -0.62
HERC3-203ENST00000407637 OGFOD3Q6PK18 319 aa11.17□□□□□ -0.62
HERC3-203ENST00000407637 FAM160A2Q8N612 972 aaPredicted RBP11.17□□□□□ -0.62
HERC3-203ENST00000407637 TMEM217Q8N7C4 229 aa11.17□□□□□ -0.62
HERC3-203ENST00000407637 OR51T1Q8NGJ9 327 aa11.17□□□□□ -0.62
HERC3-203ENST00000407637 OIT3Q8WWZ8 545 aa11.17□□□□□ -0.62
HERC3-203ENST00000407637 HOXB13Q92826 284 aaPredicted RBP11.17□□□□□ -0.62
HERC3-203ENST00000407637 SMIM10Q96HG1 83 aa11.17□□□□□ -0.62
HERC3-203ENST00000407637 LIME1Q9H400 295 aa11.17□□□□□ -0.62
HERC3-203ENST00000407637 GSX1Q9H4S2 264 aaPredicted RBP11.17□□□□□ -0.62
HERC3-203ENST00000407637 CISD1Q9NZ45 108 aaKnown RBP11.17□□□□□ -0.62
HERC3-203ENST00000407637 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.17□□□□□ -0.62
HERC3-203ENST00000407637 H7BYZ3 331 aa11.17□□□□□ -0.62
HERC3-203ENST00000407637 TNFSF12O43508 249 aa11.17□□□□□ -0.62
HERC3-203ENST00000407637 CST7O76096 145 aa11.17□□□□□ -0.62
HERC3-203ENST00000407637 DDAH2O95865 285 aa11.17□□□□□ -0.62
HERC3-203ENST00000407637 DYNLT3P51808 116 aa11.17□□□□□ -0.62
HERC3-203ENST00000407637 ZNF41P51814 821 aaPredicted RBP11.17□□□□□ -0.62
HERC3-203ENST00000407637 FGF8P55075 233 aaPredicted RBP11.17□□□□□ -0.62
HERC3-203ENST00000407637 KLF3P57682 345 aaPredicted RBP11.17□□□□□ -0.62
HERC3-203ENST00000407637 PHLDA2Q53GA4 152 aa11.17□□□□□ -0.62
HERC3-203ENST00000407637 ZNF440Q8IYI8 595 aa11.17□□□□□ -0.62
HERC3-203ENST00000407637 OR5L1Q8NGL2 311 aa11.17□□□□□ -0.62
HERC3-203ENST00000407637 ADAMTS18Q8TE60 1221 aa11.17□□□□□ -0.62
HERC3-203ENST00000407637 OR5B12Q96R08 314 aa11.17□□□□□ -0.62
HERC3-203ENST00000407637 PARD6GQ9BYG4 376 aaPredicted RBP11.17□□□□□ -0.62
HERC3-203ENST00000407637 OR10A2Q9H208 303 aa11.17□□□□□ -0.62
HERC3-203ENST00000407637 RRAGCQ9HB90 399 aa11.17□□□□□ -0.62
HERC3-203ENST00000407637 HTTP42858 3142 aa11.16□□□□□ -0.62
HERC3-203ENST00000407637 ZNF732B4DXR9 585 aa11.16□□□□□ -0.62
HERC3-203ENST00000407637 K7EP13 123 aa11.16□□□□□ -0.62
HERC3-203ENST00000407637 PRNPP04156 253 aa11.16□□□□□ -0.62
HERC3-203ENST00000407637 MMDQ15546 238 aa11.16□□□□□ -0.62
HERC3-203ENST00000407637 TMEM183BQ1AE95 376 aa11.16□□□□□ -0.62
HERC3-203ENST00000407637 FBXO42Q6P3S6 717 aa11.16□□□□□ -0.62
HERC3-203ENST00000407637 TEX43Q6ZNM6 134 aa11.16□□□□□ -0.62
HERC3-203ENST00000407637 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.16□□□□□ -0.62
HERC3-203ENST00000407637 STPG4Q8N801 248 aa11.16□□□□□ -0.62
HERC3-203ENST00000407637 ZNF519Q8TB69 540 aa11.16□□□□□ -0.62
HERC3-203ENST00000407637 RTN4IP1Q8WWV3 396 aaPredicted RBP11.16□□□□□ -0.62
HERC3-203ENST00000407637 C18orf12Q96KH6 178 aa11.16□□□□□ -0.62
HERC3-203ENST00000407637 VSTM2LQ96N03 204 aa11.16□□□□□ -0.62
HERC3-203ENST00000407637 HDHD3Q9BSH5 251 aaPredicted RBP11.16□□□□□ -0.62
HERC3-203ENST00000407637 ALKBH7Q9BT30 221 aaPredicted RBP11.16□□□□□ -0.62
HERC3-203ENST00000407637 S1PR5Q9H228 398 aa11.16□□□□□ -0.62
HERC3-203ENST00000407637 Q9N2K0 584 aa11.16□□□□□ -0.62
HERC3-203ENST00000407637 THAP10Q9P2Z0 257 aaPredicted RBP11.16□□□□□ -0.62
HERC3-203ENST00000407637 RNF115Q9Y4L5 304 aa11.16□□□□□ -0.62
HERC3-203ENST00000407637 COL4A2P08572 1712 aa11.16□□□□□ -0.62
HERC3-203ENST00000407637 CCDC163A0A0D9SF12 145 aa11.16□□□□□ -0.62
HERC3-203ENST00000407637 CBY3A6NI87 242 aa11.16□□□□□ -0.62
HERC3-203ENST00000407637 SLC33A1O00400 549 aaPredicted RBP11.16□□□□□ -0.62
HERC3-203ENST00000407637 CYR61O00622 381 aa11.16□□□□□ -0.62
HERC3-203ENST00000407637 RRP8O43159 456 aaKnown RBP11.16□□□□□ -0.62
HERC3-203ENST00000407637 ZNF20P17024 532 aa11.16□□□□□ -0.62
HERC3-203ENST00000407637 BLVRBP30043 206 aaPredicted RBP11.16□□□□□ -0.62
HERC3-203ENST00000407637 RPL27P61353 136 aaKnown RBP11.16□□□□□ -0.62
HERC3-203ENST00000407637 ABCA11PQ4W5N1 156 aa11.16□□□□□ -0.62
HERC3-203ENST00000407637 TPTE2P1Q5T6R2 138 aa11.16□□□□□ -0.62
HERC3-203ENST00000407637 VHLLQ6RSH7 139 aa11.16□□□□□ -0.62
HERC3-203ENST00000407637 LIAT1Q6ZQX7 453 aa11.16□□□□□ -0.62
HERC3-203ENST00000407637 OR5AS1Q8N127 324 aa11.16□□□□□ -0.62
HERC3-203ENST00000407637 LYG1Q8N1E2 194 aa11.16□□□□□ -0.62
HERC3-203ENST00000407637 OR5D18Q8NGL1 313 aa11.16□□□□□ -0.62
HERC3-203ENST00000407637 OR4D5Q8NGN0 318 aa11.16□□□□□ -0.62
HERC3-203ENST00000407637 GPER1Q99527 375 aa11.16□□□□□ -0.62
HERC3-203ENST00000407637 PILRAQ9UKJ1 303 aa11.16□□□□□ -0.62
HERC3-203ENST00000407637 VCANP13611 3396 aa11.16□□□□□ -0.62
HERC3-203ENST00000407637 SHANK1Q9Y566 2161 aa11.15□□□□□ -0.62
HERC3-203ENST00000407637 SPAG17Q6Q759 2223 aa11.15□□□□□ -0.62
HERC3-203ENST00000407637 SSSCA1O60232 199 aa11.15□□□□□ -0.62
HERC3-203ENST00000407637 EFEMP2O95967 443 aa11.15□□□□□ -0.62
HERC3-203ENST00000407637 HRASP01112 189 aa11.15□□□□□ -0.62
HERC3-203ENST00000407637 IGHEP01854 428 aa11.15□□□□□ -0.62
HERC3-203ENST00000407637 ECI1P42126 302 aa11.15□□□□□ -0.62
HERC3-203ENST00000407637 FXYD4P59646 89 aa11.15□□□□□ -0.62
HERC3-203ENST00000407637 SHHQ15465 462 aa11.15□□□□□ -0.62
HERC3-203ENST00000407637 ZNF787Q6DD87 383 aa11.15□□□□□ -0.62
HERC3-203ENST00000407637 LCN15Q6UWW0 184 aa11.15□□□□□ -0.62
HERC3-203ENST00000407637 Q6ZVH6 145 aa11.15□□□□□ -0.62
HERC3-203ENST00000407637 COMMD2Q86X83 199 aa11.15□□□□□ -0.62
HERC3-203ENST00000407637 CALHM1Q8IU99 346 aa11.15□□□□□ -0.62
HERC3-203ENST00000407637 BCORP1Q8N888 145 aa11.15□□□□□ -0.62
HERC3-203ENST00000407637 GNPNAT1Q96EK6 184 aaPredicted RBP11.15□□□□□ -0.62
HERC3-203ENST00000407637 SMIM7Q9BQ49 75 aa11.15□□□□□ -0.62
HERC3-203ENST00000407637 VAMP8Q9BV40 100 aa11.15□□□□□ -0.62
HERC3-203ENST00000407637 MAGT1Q9H0U3 335 aa11.15□□□□□ -0.62
HERC3-203ENST00000407637 NCOR1P1Q9H4R4 102 aa11.15□□□□□ -0.62
HERC3-203ENST00000407637 FAM206AQ9NX38 181 aa11.15□□□□□ -0.62
HERC3-203ENST00000407637 OR6C3Q9NZP0 311 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms