RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 SLC36A1Q7Z2H8 476 aa21.78■■□□□ 1.08
CPNE1-205ENST00000401607 RCC2Q9P258 522 aaKnown RBP21.78■■□□□ 1.08
CPNE1-205ENST00000401607 ZNF221Q9UK13 617 aa21.78■■□□□ 1.08
CPNE1-205ENST00000401607 HEATR1Q9H583 2144 aaKnown RBP21.78■■□□□ 1.08
CPNE1-205ENST00000401607 CHD8Q9HCK8 2581 aa21.78■■□□□ 1.08
CPNE1-205ENST00000401607 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP21.77■■□□□ 1.08
CPNE1-205ENST00000401607 IGHV3-64DA0A0J9YX35 117 aa21.77■■□□□ 1.08
CPNE1-205ENST00000401607 UBE2QL1A1L167 161 aa21.77■■□□□ 1.08
CPNE1-205ENST00000401607 F5H5P2 479 aa21.77■■□□□ 1.08
CPNE1-205ENST00000401607 CDIPTO14735 213 aa21.77■■□□□ 1.08
CPNE1-205ENST00000401607 IL5P05113 134 aa21.77■■□□□ 1.08
CPNE1-205ENST00000401607 PMELP40967 661 aa21.77■■□□□ 1.08
CPNE1-205ENST00000401607 EIF2B2P49770 351 aaKnown RBP21.77■■□□□ 1.08
CPNE1-205ENST00000401607 WFDC8Q8IUA0 241 aa21.77■■□□□ 1.08
CPNE1-205ENST00000401607 FAM58AQ8N1B3 248 aa21.77■■□□□ 1.08
CPNE1-205ENST00000401607 TMEM171Q8WVE6 324 aa21.77■■□□□ 1.08
CPNE1-205ENST00000401607 SEC22CQ9BRL7 303 aa21.77■■□□□ 1.08
CPNE1-205ENST00000401607 CXXC4Q9H2H0 198 aa21.77■■□□□ 1.08
CPNE1-205ENST00000401607 PLK3Q9H4B4 646 aa21.77■■□□□ 1.08
CPNE1-205ENST00000401607 RANGRFQ9HD47 186 aaPredicted RBP21.77■■□□□ 1.08
CPNE1-205ENST00000401607 POLDIP2Q9Y2S7 368 aa21.77■■□□□ 1.08
CPNE1-205ENST00000401607 RLN1P04808 185 aa21.76■■□□□ 1.07
CPNE1-205ENST00000401607 GRPP07492 148 aa21.76■■□□□ 1.07
CPNE1-205ENST00000401607 DTYMKP23919 212 aa21.76■■□□□ 1.07
CPNE1-205ENST00000401607 ERVK11-1P61568 191 aa21.76■■□□□ 1.07
CPNE1-205ENST00000401607 CD83Q01151 205 aa21.76■■□□□ 1.07
CPNE1-205ENST00000401607 MAB21L1Q13394 359 aa21.76■■□□□ 1.07
CPNE1-205ENST00000401607 FCN2Q15485 313 aa21.76■■□□□ 1.07
CPNE1-205ENST00000401607 METTL11BQ5VVY1 283 aa21.76■■□□□ 1.07
CPNE1-205ENST00000401607 PIAS4Q8N2W9 510 aaPredicted RBP21.76■■□□□ 1.07
CPNE1-205ENST00000401607 OR13G1Q8NGZ3 307 aa21.76■■□□□ 1.07
CPNE1-205ENST00000401607 DACT3Q96B18 629 aaPredicted RBP21.76■■□□□ 1.07
CPNE1-205ENST00000401607 MED28Q9H204 178 aa21.76■■□□□ 1.07
CPNE1-205ENST00000401607 RHOFQ9HBH0 211 aa21.76■■□□□ 1.07
CPNE1-205ENST00000401607 CCL21O00585 134 aa21.76■■□□□ 1.07
CPNE1-205ENST00000401607 IGHV3-13P01766 116 aa21.76■■□□□ 1.07
CPNE1-205ENST00000401607 FCGR3AP08637 254 aa21.76■■□□□ 1.07
CPNE1-205ENST00000401607 DUSP1P28562 367 aa21.76■■□□□ 1.07
CPNE1-205ENST00000401607 LINC00596Q86U02 117 aa21.76■■□□□ 1.07
CPNE1-205ENST00000401607 C11orf53Q8IXP5 236 aa21.76■■□□□ 1.07
CPNE1-205ENST00000401607 OR5H2Q8NGV7 314 aa21.76■■□□□ 1.07
CPNE1-205ENST00000401607 DUSP13Q9UII6 198 aa21.76■■□□□ 1.07
CPNE1-205ENST00000401607 IFNA6P05013 189 aa21.75■■□□□ 1.07
CPNE1-205ENST00000401607 PGA5P0DJD9 388 aa21.75■■□□□ 1.07
CPNE1-205ENST00000401607 IKZF1Q13422 519 aa21.75■■□□□ 1.07
CPNE1-205ENST00000401607 IL13RA2Q14627 380 aa21.75■■□□□ 1.07
CPNE1-205ENST00000401607 CD276Q5ZPR3 534 aa21.75■■□□□ 1.07
CPNE1-205ENST00000401607 VHLLQ6RSH7 139 aa21.75■■□□□ 1.07
CPNE1-205ENST00000401607 GTF3AQ92664 365 aaKnown RBP21.75■■□□□ 1.07
CPNE1-205ENST00000401607 MED30Q96HR3 178 aa21.75■■□□□ 1.07
CPNE1-205ENST00000401607 FYTTD1Q96QD9 318 aaKnown RBP21.75■■□□□ 1.07
CPNE1-205ENST00000401607 CHST6Q9GZX3 395 aa21.75■■□□□ 1.07
CPNE1-205ENST00000401607 ZNF442Q9H7R0 627 aa21.75■■□□□ 1.07
CPNE1-205ENST00000401607 TMEM82A0PJX8 343 aa21.74■■□□□ 1.07
CPNE1-205ENST00000401607 OR2AT4A6NND4 320 aa21.74■■□□□ 1.07
CPNE1-205ENST00000401607 ERVH48-1M5A8F1 160 aa21.74■■□□□ 1.07
CPNE1-205ENST00000401607 TAS2R46P59540 309 aa21.74■■□□□ 1.07
CPNE1-205ENST00000401607 MRPS15P82914 257 aaKnown RBP21.74■■□□□ 1.07
CPNE1-205ENST00000401607 ATPAF1Q5TC12 328 aaPredicted RBP21.74■■□□□ 1.07
CPNE1-205ENST00000401607 TMEM108Q6UXF1 575 aa21.74■■□□□ 1.07
CPNE1-205ENST00000401607 Q6ZPA2 131 aa21.74■■□□□ 1.07
CPNE1-205ENST00000401607 SPERTQ8NA61 448 aa21.74■■□□□ 1.07
CPNE1-205ENST00000401607 OR11H7Q8NGC8 314 aa21.74■■□□□ 1.07
CPNE1-205ENST00000401607 OR5AP2Q8NGF4 316 aa21.74■■□□□ 1.07
CPNE1-205ENST00000401607 NRIP2Q9BQI9 281 aa21.74■■□□□ 1.07
CPNE1-205ENST00000401607 TLNRD1Q9H1K6 362 aa21.74■■□□□ 1.07
CPNE1-205ENST00000401607 IGLV3-9A0A075B6K5 115 aa21.74■■□□□ 1.07
CPNE1-205ENST00000401607 FAM221AA4D161 298 aa21.74■■□□□ 1.07
CPNE1-205ENST00000401607 DPRXA6NFQ7 191 aa21.74■■□□□ 1.07
CPNE1-205ENST00000401607 ASCL1P50553 236 aa21.74■■□□□ 1.07
CPNE1-205ENST00000401607 SSX8Q7RTT4 187 aa21.74■■□□□ 1.07
CPNE1-205ENST00000401607 Q8IYB0 196 aa21.74■■□□□ 1.07
CPNE1-205ENST00000401607 ARRDC1Q8N5I2 433 aa21.74■■□□□ 1.07
CPNE1-205ENST00000401607 SYT3Q9BQG1 590 aa21.74■■□□□ 1.07
CPNE1-205ENST00000401607 EDARQ9UNE0 448 aa21.74■■□□□ 1.07
CPNE1-205ENST00000401607 VSIG4Q9Y279 399 aa21.74■■□□□ 1.07
CPNE1-205ENST00000401607 ATXN7O15265 892 aaPredicted RBP21.73■■□□□ 1.07
CPNE1-205ENST00000401607 PTAFRP25105 342 aa21.73■■□□□ 1.07
CPNE1-205ENST00000401607 KLF3P57682 345 aaPredicted RBP21.73■■□□□ 1.07
CPNE1-205ENST00000401607 RPS23P62266 143 aaKnown RBP21.73■■□□□ 1.07
CPNE1-205ENST00000401607 PRAMEF6Q5VXH4 476 aa21.73■■□□□ 1.07
CPNE1-205ENST00000401607 C12orf4Q9NQ89 552 aa21.73■■□□□ 1.07
CPNE1-205ENST00000401607 TPD52L2O43399 206 aaKnown RBP21.72■■□□□ 1.07
CPNE1-205ENST00000401607 ACAA1P09110 424 aaPredicted RBP21.72■■□□□ 1.07
CPNE1-205ENST00000401607 ZNF626Q68DY1 528 aa21.72■■□□□ 1.07
CPNE1-205ENST00000401607 NUP37Q8NFH4 326 aa21.72■■□□□ 1.07
CPNE1-205ENST00000401607 OR52B4Q8NGK2 314 aa21.72■■□□□ 1.07
CPNE1-205ENST00000401607 DMRTB1Q96MA1 342 aa21.72■■□□□ 1.07
CPNE1-205ENST00000401607 WFIKKN1Q96NZ8 548 aa21.72■■□□□ 1.07
CPNE1-205ENST00000401607 ALX4Q9H161 411 aaPredicted RBP21.72■■□□□ 1.07
CPNE1-205ENST00000401607 FN3KRPQ9HA64 309 aa21.72■■□□□ 1.07
CPNE1-205ENST00000401607 ZSCAN5BA6NJL1 495 aa21.71■■□□□ 1.07
CPNE1-205ENST00000401607 SNRPGP15A8MWD9 76 aa21.71■■□□□ 1.07
CPNE1-205ENST00000401607 SDCBPO00560 298 aaPredicted RBP21.71■■□□□ 1.07
CPNE1-205ENST00000401607 OR3A3P47888 321 aa21.71■■□□□ 1.07
CPNE1-205ENST00000401607 ADORA2A-AS1P86434 159 aa21.71■■□□□ 1.07
CPNE1-205ENST00000401607 MPPED2Q15777 294 aa21.71■■□□□ 1.07
CPNE1-205ENST00000401607 CHRFAM7AQ494W8 412 aa21.71■■□□□ 1.07
CPNE1-205ENST00000401607 ZNF826PQ6ZT77 177 aa21.71■■□□□ 1.07
CPNE1-205ENST00000401607 OVCH2Q7RTZ1 564 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms