RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 CXXC4Q9H2H0 198 aa16.04■□□□□ 0.16
COL18A1-204ENST00000400337 LY75O60449 1722 aa16.04■□□□□ 0.16
COL18A1-204ENST00000400337 SPAARA0A1B0GVQ0 90 aa16.04■□□□□ 0.16
COL18A1-204ENST00000400337 RNASEK-C17orf49H0YIS7 233 aa16.04■□□□□ 0.16
COL18A1-204ENST00000400337 LIFP15018 202 aa16.04■□□□□ 0.16
COL18A1-204ENST00000400337 A0A1W2PPQ1 181 aa16.04■□□□□ 0.16
COL18A1-204ENST00000400337 ZNF574Q6ZN55 896 aaPredicted RBP16.04■□□□□ 0.16
COL18A1-204ENST00000400337 ZPLD1Q8TCW7 415 aa16.04■□□□□ 0.16
COL18A1-204ENST00000400337 ASB5Q8WWX0 329 aa16.04■□□□□ 0.16
COL18A1-204ENST00000400337 SLC35D1Q9NTN3 355 aa16.04■□□□□ 0.16
COL18A1-204ENST00000400337 FAM24AA6NFZ4 105 aa16.04■□□□□ 0.16
COL18A1-204ENST00000400337 ACTL6AO96019 429 aa16.04■□□□□ 0.16
COL18A1-204ENST00000400337 ZNF17P17021 662 aa16.04■□□□□ 0.16
COL18A1-204ENST00000400337 RAB40CQ96S21 281 aa16.04■□□□□ 0.16
COL18A1-204ENST00000400337 GLRX2Q9NS18 164 aa16.04■□□□□ 0.16
COL18A1-204ENST00000400337 ADAP1O75689 374 aa16.03■□□□□ 0.16
COL18A1-204ENST00000400337 CD300CQ08708 224 aa16.03■□□□□ 0.16
COL18A1-204ENST00000400337 NTNG2Q96CW9 530 aa16.03■□□□□ 0.16
COL18A1-204ENST00000400337 SLC52A3Q9NQ40 469 aa16.03■□□□□ 0.16
COL18A1-204ENST00000400337 PPIHO43447 177 aaKnown RBP16.03■□□□□ 0.16
COL18A1-204ENST00000400337 MPPED2Q15777 294 aa16.03■□□□□ 0.16
COL18A1-204ENST00000400337 RNF133Q8WVZ7 376 aa16.03■□□□□ 0.16
COL18A1-204ENST00000400337 MOB3AQ96BX8 217 aa16.03■□□□□ 0.16
COL18A1-204ENST00000400337 GEMIN2O14893 280 aaKnown RBP16.03■□□□□ 0.16
COL18A1-204ENST00000400337 CTDSPLO15194 276 aa16.03■□□□□ 0.16
COL18A1-204ENST00000400337 GSTZ1O43708 216 aaPredicted RBP16.03■□□□□ 0.16
COL18A1-204ENST00000400337 SOX15O60248 233 aa16.03■□□□□ 0.16
COL18A1-204ENST00000400337 ERGP11308 486 aa16.03■□□□□ 0.16
COL18A1-204ENST00000400337 DCAF10Q5QP82 559 aa16.03■□□□□ 0.16
COL18A1-204ENST00000400337 TMEM91Q6ZNR0 172 aa16.03■□□□□ 0.16
COL18A1-204ENST00000400337 NDFIP1Q9BT67 221 aa16.03■□□□□ 0.16
COL18A1-204ENST00000400337 LRFN3Q9BTN0 628 aa16.03■□□□□ 0.16
COL18A1-204ENST00000400337 ANXA10Q9UJ72 324 aa16.03■□□□□ 0.16
COL18A1-204ENST00000400337 ZNF638Q14966 1978 aaKnown RBP16.03■□□□□ 0.16
COL18A1-204ENST00000400337 NTF3P20783 257 aa16.03■□□□□ 0.16
COL18A1-204ENST00000400337 SLC38A11Q08AI6 406 aa16.03■□□□□ 0.16
COL18A1-204ENST00000400337 TMEM56Q96MV1 263 aa16.03■□□□□ 0.16
COL18A1-204ENST00000400337 OR2H1Q9GZK4 316 aa16.03■□□□□ 0.16
COL18A1-204ENST00000400337 GPR35Q9HC97 309 aa16.03■□□□□ 0.16
COL18A1-204ENST00000400337 PTP4A3O75365 173 aa16.02■□□□□ 0.16
COL18A1-204ENST00000400337 SFTA3P0C7M3 94 aa16.02■□□□□ 0.16
COL18A1-204ENST00000400337 GABRA1P14867 456 aa16.02■□□□□ 0.16
COL18A1-204ENST00000400337 FOSL1P15407 271 aa16.02■□□□□ 0.16
COL18A1-204ENST00000400337 GUK1Q16774 197 aa16.02■□□□□ 0.16
COL18A1-204ENST00000400337 PMS2CLQ68D20 193 aa16.02■□□□□ 0.16
COL18A1-204ENST00000400337 TRAT1Q6PIZ9 186 aa16.02■□□□□ 0.16
COL18A1-204ENST00000400337 RPEQ96AT9 228 aa16.02■□□□□ 0.16
COL18A1-204ENST00000400337 SERTM2A0A1B0GWG4 89 aa16.02■□□□□ 0.16
COL18A1-204ENST00000400337 ZFP36L2P47974 494 aaKnown RBP16.02■□□□□ 0.16
COL18A1-204ENST00000400337 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.02■□□□□ 0.16
COL18A1-204ENST00000400337 RPL7L1Q6DKI1 246 aaKnown RBP16.02■□□□□ 0.16
COL18A1-204ENST00000400337 CTDSP1Q9GZU7 261 aa16.02■□□□□ 0.16
COL18A1-204ENST00000400337 PILRAQ9UKJ1 303 aa16.02■□□□□ 0.16
COL18A1-204ENST00000400337 TIMM9Q9Y5J7 89 aa16.02■□□□□ 0.16
COL18A1-204ENST00000400337 CYTIPO60759 359 aa16.02■□□□□ 0.15
COL18A1-204ENST00000400337 SPINK9Q5DT21 86 aa16.02■□□□□ 0.15
COL18A1-204ENST00000400337 BHLHA15Q7RTS1 189 aaPredicted RBP16.02■□□□□ 0.15
COL18A1-204ENST00000400337 G3V3Q6 166 aa16.02■□□□□ 0.15
COL18A1-204ENST00000400337 COL13A1Q5TAT6 717 aaPredicted RBP16.02■□□□□ 0.15
COL18A1-204ENST00000400337 SLC26A10Q8NG04 563 aa16.02■□□□□ 0.15
COL18A1-204ENST00000400337 CXorf58Q96LI9 332 aa16.02■□□□□ 0.15
COL18A1-204ENST00000400337 GPR27Q9NS67 375 aa16.02■□□□□ 0.15
COL18A1-204ENST00000400337 PRR13Q9NZ81 148 aa16.02■□□□□ 0.15
COL18A1-204ENST00000400337 TUBGCP6Q96RT7 1819 aa16.02■□□□□ 0.15
COL18A1-204ENST00000400337 RAB7AP51149 207 aa16.01■□□□□ 0.15
COL18A1-204ENST00000400337 TSPO2Q5TGU0 170 aa16.01■□□□□ 0.15
COL18A1-204ENST00000400337 OR2M7Q8NG81 312 aa16.01■□□□□ 0.15
COL18A1-204ENST00000400337 OR5D13Q8NGL4 314 aa16.01■□□□□ 0.15
COL18A1-204ENST00000400337 APOBEC4Q8WW27 367 aaKnown RBP16.01■□□□□ 0.15
COL18A1-204ENST00000400337 TGOLN2O43493 480 aa16.01■□□□□ 0.15
COL18A1-204ENST00000400337 FABP9Q0Z7S8 132 aa16.01■□□□□ 0.15
COL18A1-204ENST00000400337 PRSS27Q9BQR3 290 aa16.01■□□□□ 0.15
COL18A1-204ENST00000400337 CDIPTO14735 213 aa16.01■□□□□ 0.15
COL18A1-204ENST00000400337 FFAR4Q5NUL3 377 aa16.01■□□□□ 0.15
COL18A1-204ENST00000400337 PRSS54Q6PEW0 395 aa16.01■□□□□ 0.15
COL18A1-204ENST00000400337 OR2C3Q8N628 320 aa16.01■□□□□ 0.15
COL18A1-204ENST00000400337 FAM103A1Q9BTL3 118 aaKnown RBP16.01■□□□□ 0.15
COL18A1-204ENST00000400337 COLQQ9Y215 455 aaPredicted RBP16.01■□□□□ 0.15
COL18A1-204ENST00000400337 hADV38S2A0JD32 116 aa16.01■□□□□ 0.15
COL18A1-204ENST00000400337 H3F3AP84243 136 aa16.01■□□□□ 0.15
COL18A1-204ENST00000400337 ZNF385AQ96PM9 386 aaKnown RBP16.01■□□□□ 0.15
COL18A1-204ENST00000400337 TINAGQ9UJW2 476 aa16.01■□□□□ 0.15
COL18A1-204ENST00000400337 MED19A0JLT2 244 aaPredicted RBP16.01■□□□□ 0.15
COL18A1-204ENST00000400337 EPOPA6NHQ4 379 aa16.01■□□□□ 0.15
COL18A1-204ENST00000400337 PNPP00491 289 aa16.01■□□□□ 0.15
COL18A1-204ENST00000400337 FCARP24071 287 aa16.01■□□□□ 0.15
COL18A1-204ENST00000400337 ZNF528Q3MIS6 628 aa16.01■□□□□ 0.15
COL18A1-204ENST00000400337 HIKESHIQ53FT3 197 aa16.01■□□□□ 0.15
COL18A1-204ENST00000400337 TMEM38BQ9NVV0 291 aa16.01■□□□□ 0.15
COL18A1-204ENST00000400337 RP1P56715 2156 aa16■□□□□ 0.15
COL18A1-204ENST00000400337 AGFG2O95081 481 aa16■□□□□ 0.15
COL18A1-204ENST00000400337 OR2T6Q8NHC8 308 aa16■□□□□ 0.15
COL18A1-204ENST00000400337 GAL3ST2Q9H3Q3 398 aa16■□□□□ 0.15
COL18A1-204ENST00000400337 ATAD5Q96QE3 1844 aa16■□□□□ 0.15
COL18A1-204ENST00000400337 ZNF320A2RRD8 509 aa16■□□□□ 0.15
COL18A1-204ENST00000400337 COX7A1P24310 79 aa16■□□□□ 0.15
COL18A1-204ENST00000400337 PRSS53Q2L4Q9 553 aa16■□□□□ 0.15
COL18A1-204ENST00000400337 ZNF561Q8N587 486 aa16■□□□□ 0.15
COL18A1-204ENST00000400337 C10orf35Q96D05 121 aa16■□□□□ 0.15
COL18A1-204ENST00000400337 CLCF1Q9UBD9 225 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms