RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 CCL23P55773 120 aa7.73□□□□□ -1.17
CACNA1C-220ENST00000399655 SUMO4Q6EEV6 95 aa7.73□□□□□ -1.17
CACNA1C-220ENST00000399655 TMUB1Q9BVT8 246 aa7.73□□□□□ -1.17
CACNA1C-220ENST00000399655 ABCA2Q9BZC7 2435 aa7.73□□□□□ -1.17
CACNA1C-220ENST00000399655 KLKB1P03952 638 aa7.73□□□□□ -1.17
CACNA1C-220ENST00000399655 MORN3Q6PF18 240 aaPredicted RBP7.73□□□□□ -1.17
CACNA1C-220ENST00000399655 OR5C1Q8NGR4 320 aa7.73□□□□□ -1.17
CACNA1C-220ENST00000399655 SLC37A1P57057 533 aa7.73□□□□□ -1.17
CACNA1C-220ENST00000399655 STPG2Q8N412 459 aa7.73□□□□□ -1.17
CACNA1C-220ENST00000399655 B4GALNT1Q00973 533 aa7.72□□□□□ -1.17
CACNA1C-220ENST00000399655 RGS7BPQ6MZT1 257 aaPredicted RBP7.72□□□□□ -1.17
CACNA1C-220ENST00000399655 TAS1R1Q7RTX1 841 aa7.72□□□□□ -1.17
CACNA1C-220ENST00000399655 SIRT6Q8N6T7 355 aa7.72□□□□□ -1.17
CACNA1C-220ENST00000399655 HES2Q9Y543 173 aa7.72□□□□□ -1.17
CACNA1C-220ENST00000399655 ADGRB1O14514 1584 aa7.72□□□□□ -1.17
CACNA1C-220ENST00000399655 A6NL46 340 aa7.72□□□□□ -1.17
CACNA1C-220ENST00000399655 VEGFAP15692 232 aaPredicted RBP7.72□□□□□ -1.17
CACNA1C-220ENST00000399655 HIVEP3Q5T1R4 2406 aa7.72□□□□□ -1.17
CACNA1C-220ENST00000399655 LINC00587B1AMM8 73 aa7.72□□□□□ -1.17
CACNA1C-220ENST00000399655 INHBBP09529 407 aa7.72□□□□□ -1.17
CACNA1C-220ENST00000399655 LGALSLQ3ZCW2 172 aaPredicted RBP7.72□□□□□ -1.17
CACNA1C-220ENST00000399655 SVIPQ8NHG7 77 aa7.72□□□□□ -1.17
CACNA1C-220ENST00000399655 ACER1Q8TDN7 264 aa7.72□□□□□ -1.17
CACNA1C-220ENST00000399655 NDUFB3O43676 98 aa7.72□□□□□ -1.17
CACNA1C-220ENST00000399655 EDN3P14138 238 aa7.72□□□□□ -1.17
CACNA1C-220ENST00000399655 FUT7Q11130 342 aa7.72□□□□□ -1.17
CACNA1C-220ENST00000399655 LRRC75BQ2VPJ9 315 aa7.72□□□□□ -1.17
CACNA1C-220ENST00000399655 GGTA1PQ4G0N0 100 aa7.72□□□□□ -1.17
CACNA1C-220ENST00000399655 FCRL6Q6DN72 434 aa7.72□□□□□ -1.17
CACNA1C-220ENST00000399655 RLN3Q8WXF3 142 aa7.72□□□□□ -1.17
CACNA1C-220ENST00000399655 ALG14Q96F25 216 aa7.72□□□□□ -1.17
CACNA1C-220ENST00000399655 F2RL3Q96RI0 385 aa7.72□□□□□ -1.17
CACNA1C-220ENST00000399655 TREX1Q9NSU2 369 aa7.72□□□□□ -1.17
CACNA1C-220ENST00000399655 PTGDR2Q9Y5Y4 395 aa7.72□□□□□ -1.17
CACNA1C-220ENST00000399655 F12P00748 615 aaPredicted RBP7.72□□□□□ -1.17
CACNA1C-220ENST00000399655 IGHA1P01876 353 aa7.72□□□□□ -1.17
CACNA1C-220ENST00000399655 IGHA2P01877 340 aa7.72□□□□□ -1.17
CACNA1C-220ENST00000399655 NMNAT3Q96T66 252 aa7.72□□□□□ -1.17
CACNA1C-220ENST00000399655 FUT9Q9Y231 359 aa7.72□□□□□ -1.17
CACNA1C-220ENST00000399655 CXorf65A6NEN9 183 aa7.72□□□□□ -1.17
CACNA1C-220ENST00000399655 ZBTB42B2RXF5 422 aa7.72□□□□□ -1.17
CACNA1C-220ENST00000399655 GPANK1O95872 356 aa7.72□□□□□ -1.17
CACNA1C-220ENST00000399655 RNF182Q8N6D2 247 aa7.72□□□□□ -1.17
CACNA1C-220ENST00000399655 ZNF707Q96C28 371 aaPredicted RBP7.72□□□□□ -1.17
CACNA1C-220ENST00000399655 FAM208BQ5VWN6 2430 aa7.72□□□□□ -1.17
CACNA1C-220ENST00000399655 A0A1B0GW15 77 aa7.72□□□□□ -1.17
CACNA1C-220ENST00000399655 GNG10P50151 68 aa7.72□□□□□ -1.17
CACNA1C-220ENST00000399655 ZNF414Q96IQ9 312 aa7.72□□□□□ -1.17
CACNA1C-220ENST00000399655 MAGT1Q9H0U3 335 aa7.72□□□□□ -1.17
CACNA1C-220ENST00000399655 TXNRD2Q9NNW7 524 aa7.72□□□□□ -1.17
CACNA1C-220ENST00000399655 FITM1A5D6W6 292 aa7.72□□□□□ -1.17
CACNA1C-220ENST00000399655 IL1RNP18510 177 aa7.72□□□□□ -1.17
CACNA1C-220ENST00000399655 HIST1H4AP62805 103 aaKnown RBP7.72□□□□□ -1.17
CACNA1C-220ENST00000399655 OR5AN1Q8NGI8 311 aa7.72□□□□□ -1.17
CACNA1C-220ENST00000399655 ZNF48Q96MX3 618 aaPredicted RBP7.72□□□□□ -1.17
CACNA1C-220ENST00000399655 METTL26Q96S19 204 aa7.72□□□□□ -1.17
CACNA1C-220ENST00000399655 GGTLC1Q9BX51 225 aa7.72□□□□□ -1.17
CACNA1C-220ENST00000399655 TRAV41A0A0B4J266 112 aa7.72□□□□□ -1.17
CACNA1C-220ENST00000399655 SMIM28A0A1B0GU29 152 aa7.72□□□□□ -1.17
CACNA1C-220ENST00000399655 NPFFO15130 113 aa7.72□□□□□ -1.17
CACNA1C-220ENST00000399655 CPMP14384 443 aa7.72□□□□□ -1.17
CACNA1C-220ENST00000399655 HOXA5P20719 270 aa7.72□□□□□ -1.17
CACNA1C-220ENST00000399655 APOBEC1P41238 236 aaKnown RBP7.72□□□□□ -1.17
CACNA1C-220ENST00000399655 TIAL1Q01085 375 aaKnown RBP eCLIP7.72□□□□□ -1.17
CACNA1C-220ENST00000399655 SLC25A30Q5SVS4 291 aa7.72□□□□□ -1.17
CACNA1C-220ENST00000399655 ANKRD63C9JTQ0 380 aa7.72□□□□□ -1.17
CACNA1C-220ENST00000399655 IER3P46695 156 aa7.72□□□□□ -1.17
CACNA1C-220ENST00000399655 TECRLQ5HYJ1 363 aa7.72□□□□□ -1.17
CACNA1C-220ENST00000399655 RSPO3Q9BXY4 272 aaPredicted RBP7.72□□□□□ -1.17
CACNA1C-220ENST00000399655 PTGIRP43119 386 aa7.71□□□□□ -1.17
CACNA1C-220ENST00000399655 KAZALD1Q96I82 304 aa7.71□□□□□ -1.17
CACNA1C-220ENST00000399655 FDXRP22570 491 aa7.71□□□□□ -1.17
CACNA1C-220ENST00000399655 CLDND1Q9NY35 253 aa7.71□□□□□ -1.17
CACNA1C-220ENST00000399655 TMEM129A0AVI4 362 aa7.71□□□□□ -1.17
CACNA1C-220ENST00000399655 OR5M9Q8NGP3 310 aa7.71□□□□□ -1.17
CACNA1C-220ENST00000399655 COA4Q9NYJ1 87 aa7.71□□□□□ -1.17
CACNA1C-220ENST00000399655 SLC5A6Q9Y289 635 aa7.71□□□□□ -1.17
CACNA1C-220ENST00000399655 ZC3H13Q5T200 1668 aaKnown RBP7.71□□□□□ -1.17
CACNA1C-220ENST00000399655 CACNA1HO95180 2353 aa7.71□□□□□ -1.17
CACNA1C-220ENST00000399655 A0A1W2PP11 408 aa7.71□□□□□ -1.17
CACNA1C-220ENST00000399655 PEX10O60683 326 aa7.71□□□□□ -1.17
CACNA1C-220ENST00000399655 FUT6P51993 359 aa7.71□□□□□ -1.17
CACNA1C-220ENST00000399655 NOGQ13253 232 aa7.71□□□□□ -1.17
CACNA1C-220ENST00000399655 HFEQ30201 348 aa7.71□□□□□ -1.17
CACNA1C-220ENST00000399655 PRSS16Q9NQE7 514 aa7.71□□□□□ -1.17
CACNA1C-220ENST00000399655 TAAR3PQ9P1P4 343 aa7.71□□□□□ -1.17
CACNA1C-220ENST00000399655 ATP5LO75964 103 aa7.71□□□□□ -1.18
CACNA1C-220ENST00000399655 SORT1Q99523 831 aa7.71□□□□□ -1.18
CACNA1C-220ENST00000399655 TET3O43151 1660 aa7.71□□□□□ -1.18
CACNA1C-220ENST00000399655 P2RY10O00398 339 aa7.71□□□□□ -1.18
CACNA1C-220ENST00000399655 CYB561P49447 251 aa7.71□□□□□ -1.18
CACNA1C-220ENST00000399655 MAJINQ3KP22 176 aa7.71□□□□□ -1.18
CACNA1C-220ENST00000399655 MRPL2Q5T653 305 aaKnown RBP7.71□□□□□ -1.18
CACNA1C-220ENST00000399655 HS3ST2Q9Y278 367 aa7.71□□□□□ -1.18
CACNA1C-220ENST00000399655 PTPRMP28827 1452 aa7.71□□□□□ -1.18
CACNA1C-220ENST00000399655 HMX2A2RU54 273 aa7.71□□□□□ -1.18
CACNA1C-220ENST00000399655 IL2RAP01589 272 aa7.71□□□□□ -1.18
CACNA1C-220ENST00000399655 GYPBP06028 91 aa7.71□□□□□ -1.18
CACNA1C-220ENST00000399655 C12orf49Q9H741 205 aa7.71□□□□□ -1.18
CACNA1C-220ENST00000399655 PRDX1Q06830 199 aaKnown RBP7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms