RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 OCMP0CE72 109 aaPredicted RBP12.12□□□□□ -0.47
SMIM11A-203ENST00000399299 LIMS3P0CW19 117 aa12.12□□□□□ -0.47
SMIM11A-203ENST00000399299 LIMS4P0CW20 117 aa12.12□□□□□ -0.47
SMIM11A-203ENST00000399299 CCL3L1P16619 93 aa12.12□□□□□ -0.47
SMIM11A-203ENST00000399299 BCL3P20749 454 aa12.12□□□□□ -0.47
SMIM11A-203ENST00000399299 NPBWR2P48146 333 aa12.12□□□□□ -0.47
SMIM11A-203ENST00000399299 GBX2P52951 348 aaPredicted RBP12.12□□□□□ -0.47
SMIM11A-203ENST00000399299 MEF2CQ06413 473 aaPredicted RBP12.12□□□□□ -0.47
SMIM11A-203ENST00000399299 AANATQ16613 207 aa12.12□□□□□ -0.47
SMIM11A-203ENST00000399299 PRR31Q5SQ13 230 aa12.12□□□□□ -0.47
SMIM11A-203ENST00000399299 ZNF691Q5VV52 312 aa12.12□□□□□ -0.47
SMIM11A-203ENST00000399299 OLFML2AQ68BL7 652 aa12.12□□□□□ -0.47
SMIM11A-203ENST00000399299 C17orf107Q6ZR85 190 aa12.12□□□□□ -0.47
SMIM11A-203ENST00000399299 GDPD3Q7L5L3 318 aa12.12□□□□□ -0.47
SMIM11A-203ENST00000399299 PARP16Q8N5Y8 322 aa12.12□□□□□ -0.47
SMIM11A-203ENST00000399299 OR13C9Q8NGT0 318 aa12.12□□□□□ -0.47
SMIM11A-203ENST00000399299 OR5AK2Q8NH90 309 aa12.12□□□□□ -0.47
SMIM11A-203ENST00000399299 WFDC12Q8WWY7 111 aa12.12□□□□□ -0.47
SMIM11A-203ENST00000399299 ZCCHC4Q9H5U6 513 aa12.12□□□□□ -0.47
SMIM11A-203ENST00000399299 RBFOX1Q9NWB1 397 aaKnown RBP12.12□□□□□ -0.47
SMIM11A-203ENST00000399299 TMEM82A0PJX8 343 aa12.11□□□□□ -0.47
SMIM11A-203ENST00000399299 IRGMA1A4Y4 181 aa12.11□□□□□ -0.47
SMIM11A-203ENST00000399299 E9PI62 339 aa12.11□□□□□ -0.47
SMIM11A-203ENST00000399299 SPRY1O43609 319 aaPredicted RBP12.11□□□□□ -0.47
SMIM11A-203ENST00000399299 KDM4BO94953 1096 aa12.11□□□□□ -0.47
SMIM11A-203ENST00000399299 INMTO95050 263 aa12.11□□□□□ -0.47
SMIM11A-203ENST00000399299 ZNF728P0DKX0 622 aa12.11□□□□□ -0.47
SMIM11A-203ENST00000399299 PIPP12273 146 aaPredicted RBP12.11□□□□□ -0.47
SMIM11A-203ENST00000399299 DCKP27707 260 aa12.11□□□□□ -0.47
SMIM11A-203ENST00000399299 TTC23Q5W5X9 447 aa12.11□□□□□ -0.47
SMIM11A-203ENST00000399299 SERPINA12Q8IW75 414 aa12.11□□□□□ -0.47
SMIM11A-203ENST00000399299 SAXO1Q8IYX7 474 aa12.11□□□□□ -0.47
SMIM11A-203ENST00000399299 ZSCAN4Q8NAM6 433 aaPredicted RBP12.11□□□□□ -0.47
SMIM11A-203ENST00000399299 OR5D14Q8NGL3 314 aa12.11□□□□□ -0.47
SMIM11A-203ENST00000399299 RPS4Y2Q8TD47 263 aa12.11□□□□□ -0.47
SMIM11A-203ENST00000399299 AJUBAQ96IF1 538 aa12.11□□□□□ -0.47
SMIM11A-203ENST00000399299 PDCD1LG2Q9BQ51 273 aa12.11□□□□□ -0.47
SMIM11A-203ENST00000399299 MEGF9Q9H1U4 602 aa12.11□□□□□ -0.47
SMIM11A-203ENST00000399299 HMG20AQ9NP66 347 aa12.11□□□□□ -0.47
SMIM11A-203ENST00000399299 IL36RNQ9UBH0 155 aa12.11□□□□□ -0.47
SMIM11A-203ENST00000399299 GLS2Q9UI32 602 aa12.11□□□□□ -0.47
SMIM11A-203ENST00000399299 VWFP04275 2813 aa12.11□□□□□ -0.47
SMIM11A-203ENST00000399299 hADV38S2A0JD32 116 aa12.1□□□□□ -0.47
SMIM11A-203ENST00000399299 SULT1B1O43704 296 aa12.1□□□□□ -0.47
SMIM11A-203ENST00000399299 PRKACAP17612 351 aa12.1□□□□□ -0.47
SMIM11A-203ENST00000399299 PEX2P28328 305 aa12.1□□□□□ -0.47
SMIM11A-203ENST00000399299 ERP29P30040 261 aaKnown RBP12.1□□□□□ -0.47
SMIM11A-203ENST00000399299 TGFBR2P37173 567 aa12.1□□□□□ -0.47
SMIM11A-203ENST00000399299 EDDM3BP56851 147 aa12.1□□□□□ -0.47
SMIM11A-203ENST00000399299 SMN1Q16637 294 aaKnown RBP12.1□□□□□ -0.47
SMIM11A-203ENST00000399299 CCDC58Q4VC31 144 aa12.1□□□□□ -0.47
SMIM11A-203ENST00000399299 DHRS7BQ6IAN0 325 aaPredicted RBP12.1□□□□□ -0.47
SMIM11A-203ENST00000399299 CRIP3Q6Q6R5 217 aa12.1□□□□□ -0.47
SMIM11A-203ENST00000399299 SETD9Q8NE22 299 aa12.1□□□□□ -0.47
SMIM11A-203ENST00000399299 OR52N4Q8NGI2 321 aa12.1□□□□□ -0.47
SMIM11A-203ENST00000399299 LINC01006Q8NI28 216 aa12.1□□□□□ -0.47
SMIM11A-203ENST00000399299 PPP1R35Q8TAP8 253 aa12.1□□□□□ -0.47
SMIM11A-203ENST00000399299 RFT1Q96AA3 541 aa12.1□□□□□ -0.47
SMIM11A-203ENST00000399299 DHDHQ9UQ10 334 aa12.1□□□□□ -0.47
SMIM11A-203ENST00000399299 LINC00312Q9Y6C7 94 aa12.1□□□□□ -0.47
SMIM11A-203ENST00000399299 TRRAPQ9Y4A5 3859 aa12.1□□□□□ -0.47
SMIM11A-203ENST00000399299 IGKV1-12A0A0C4DH73 117 aa12.09□□□□□ -0.47
SMIM11A-203ENST00000399299 MGST3O14880 152 aa12.09□□□□□ -0.47
SMIM11A-203ENST00000399299 PSPNO60542 156 aa12.09□□□□□ -0.47
SMIM11A-203ENST00000399299 IGKV1D-12P01611 117 aa12.09□□□□□ -0.47
SMIM11A-203ENST00000399299 GABRR1P24046 479 aa12.09□□□□□ -0.47
SMIM11A-203ENST00000399299 LGALS4P56470 323 aa12.09□□□□□ -0.47
SMIM11A-203ENST00000399299 ADARB1P78563 741 aaKnown RBP12.09□□□□□ -0.47
SMIM11A-203ENST00000399299 IL18R1Q13478 541 aa12.09□□□□□ -0.47
SMIM11A-203ENST00000399299 GRK1Q15835 563 aa12.09□□□□□ -0.47
SMIM11A-203ENST00000399299 LRRC36Q1X8D7 754 aa12.09□□□□□ -0.47
SMIM11A-203ENST00000399299 LRRC75BQ2VPJ9 315 aa12.09□□□□□ -0.47
SMIM11A-203ENST00000399299 ZNF529Q6P280 563 aa12.09□□□□□ -0.47
SMIM11A-203ENST00000399299 RPL22L1Q6P5R6 122 aaKnown RBP12.09□□□□□ -0.47
SMIM11A-203ENST00000399299 TMPRSS11AQ6ZMR5 421 aa12.09□□□□□ -0.47
SMIM11A-203ENST00000399299 ZNF782Q6ZMW2 699 aaPredicted RBP12.09□□□□□ -0.47
SMIM11A-203ENST00000399299 Q6ZSV7 163 aa12.09□□□□□ -0.47
SMIM11A-203ENST00000399299 TCF23Q7RTU1 214 aa12.09□□□□□ -0.47
SMIM11A-203ENST00000399299 DHRSXQ8N5I4 330 aa12.09□□□□□ -0.47
SMIM11A-203ENST00000399299 OR13D1Q8NGV5 346 aa12.09□□□□□ -0.47
SMIM11A-203ENST00000399299 CNIH3Q8TBE1 160 aa12.09□□□□□ -0.47
SMIM11A-203ENST00000399299 TSEN15Q8WW01 171 aaKnown RBP12.09□□□□□ -0.47
SMIM11A-203ENST00000399299 C17orf50Q8WW18 174 aa12.09□□□□□ -0.47
SMIM11A-203ENST00000399299 CYGBQ8WWM9 190 aa12.09□□□□□ -0.47
SMIM11A-203ENST00000399299 CPNE2Q96FN4 548 aaPredicted RBP12.09□□□□□ -0.47
SMIM11A-203ENST00000399299 ZNF714Q96N38 554 aa12.09□□□□□ -0.47
SMIM11A-203ENST00000399299 SPACA5Q96QH8 159 aa12.09□□□□□ -0.47
SMIM11A-203ENST00000399299 C16orf95Q9H693 158 aa12.09□□□□□ -0.47
SMIM11A-203ENST00000399299 EXOSC4Q9NPD3 245 aaKnown RBP12.09□□□□□ -0.47
SMIM11A-203ENST00000399299 DIMT1Q9UNQ2 313 aaKnown RBP12.09□□□□□ -0.47
SMIM11A-203ENST00000399299 EXOSC1Q9Y3B2 195 aaKnown RBP12.09□□□□□ -0.47
SMIM11A-203ENST00000399299 TBL2Q9Y4P3 447 aaKnown RBP12.09□□□□□ -0.47
SMIM11A-203ENST00000399299 RNF114Q9Y508 228 aa12.09□□□□□ -0.47
SMIM11A-203ENST00000399299 PCDHGB5Q9Y5G0 923 aa12.09□□□□□ -0.47
SMIM11A-203ENST00000399299 FAM90A8PA6NJQ4 464 aa12.08□□□□□ -0.48
SMIM11A-203ENST00000399299 ODF3BA8MYP8 253 aa12.08□□□□□ -0.48
SMIM11A-203ENST00000399299 SH2D1BO14796 132 aa12.08□□□□□ -0.48
SMIM11A-203ENST00000399299 TSPAN9O75954 239 aa12.08□□□□□ -0.48
SMIM11A-203ENST00000399299 CLIC3O95833 236 aa12.08□□□□□ -0.48
SMIM11A-203ENST00000399299 HCKP08631 526 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms